Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12370 and AO353_12375 overlap by 4 nucleotides AO353_12375 and AO353_12380 overlap by 1 nucleotides AO353_12380 and AO353_12385 are separated by 155 nucleotides
AO353_12370: AO353_12370 - ubiquinone biosynthesis protein UbiB, at 2,720,692 to 2,722,296
_12370
AO353_12375: AO353_12375 - sterol-binding protein, at 2,722,293 to 2,722,916
_12375
AO353_12380: AO353_12380 - ubiquinone biosynthesis methyltransferase UbiE, at 2,722,916 to 2,723,686
_12380
AO353_12385: AO353_12385 - polyhydroxyalkanoic acid system protein, at 2,723,842 to 2,724,117
_12385
Position (kb)
2722
2723 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 2722.559 kb on - strand, within AO353_12375 at 2723.721 kb on - strand at 2723.721 kb on - strand at 2723.721 kb on - strand at 2723.721 kb on - strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.765 kb on - strand at 2723.765 kb on - strand at 2723.765 kb on - strand at 2723.765 kb on - strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 2,722,559 - AO353_12375 0.43 +4.1 2,723,721 - +0.3 2,723,721 - +1.0 2,723,721 - -0.5 2,723,721 - -0.0 2,723,759 + +4.0 2,723,759 + +3.0 2,723,759 + +2.2 2,723,759 + +3.3 2,723,759 + +2.0 2,723,759 + +1.0 2,723,759 + +2.9 2,723,760 - +1.5 2,723,760 - +1.5 2,723,760 - -0.0 2,723,760 - -0.3 2,723,760 - +1.6 2,723,760 - -0.3 2,723,760 - +0.5 2,723,760 - +1.4 2,723,760 - +1.0 2,723,760 - +0.5 2,723,764 + +2.4 2,723,764 + +5.4 2,723,764 + +4.9 2,723,764 + +3.0 2,723,764 + +4.2 2,723,765 - +1.7 2,723,765 - -0.3 2,723,765 - -0.0 2,723,765 - -0.0 2,723,850 + +0.7 2,723,850 + -0.0 2,723,850 + +1.1 2,723,850 + +1.7 2,723,850 + +0.0 2,723,853 + +0.9 2,723,853 + +1.1 2,723,853 + +1.5 2,723,853 + +1.9 2,723,853 + +1.8 2,723,853 + +1.7 2,723,854 - -0.8 2,723,854 - -0.3 2,723,854 - -1.1 2,723,854 - -0.1 2,723,854 - +1.4 2,723,854 - +0.3 2,723,854 - -0.5 2,723,854 - +2.0 2,723,854 - -0.7 2,723,854 - -0.2
Or see this region's nucleotide sequence