Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11170 and AO353_11175 are separated by 128 nucleotides AO353_11175 and AO353_11180 are separated by 149 nucleotides
AO353_11170: AO353_11170 - hypothetical protein, at 2,444,592 to 2,446,538
_11170
AO353_11175: AO353_11175 - tryptophan synthase subunit beta, at 2,446,667 to 2,447,005
_11175
AO353_11180: AO353_11180 - large adhesive protein, at 2,447,155 to 2,462,784
_11180
Position (kb)
2446
2447
2448 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2445.833 kb on + strand, within AO353_11170 at 2445.833 kb on + strand, within AO353_11170 at 2445.833 kb on + strand, within AO353_11170 at 2445.833 kb on + strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.834 kb on - strand, within AO353_11170 at 2445.876 kb on + strand, within AO353_11170 at 2445.876 kb on + strand, within AO353_11170 at 2445.876 kb on + strand, within AO353_11170 at 2445.876 kb on + strand, within AO353_11170 at 2445.876 kb on + strand, within AO353_11170 at 2445.876 kb on + strand, within AO353_11170 at 2445.877 kb on - strand, within AO353_11170 at 2445.877 kb on - strand, within AO353_11170 at 2445.877 kb on - strand, within AO353_11170 at 2445.877 kb on - strand, within AO353_11170 at 2445.877 kb on - strand, within AO353_11170 at 2445.924 kb on + strand, within AO353_11170 at 2445.924 kb on + strand, within AO353_11170 at 2445.924 kb on + strand, within AO353_11170 at 2445.924 kb on + strand, within AO353_11170 at 2445.925 kb on - strand, within AO353_11170 at 2445.925 kb on - strand, within AO353_11170 at 2445.925 kb on - strand, within AO353_11170 at 2445.925 kb on - strand, within AO353_11170 at 2445.925 kb on - strand, within AO353_11170 at 2445.925 kb on - strand, within AO353_11170 at 2446.127 kb on + strand, within AO353_11170 at 2446.127 kb on + strand, within AO353_11170 at 2446.128 kb on - strand, within AO353_11170 at 2446.128 kb on - strand, within AO353_11170 at 2446.201 kb on + strand, within AO353_11170 at 2446.201 kb on + strand, within AO353_11170 at 2446.202 kb on - strand, within AO353_11170 at 2446.202 kb on - strand, within AO353_11170 at 2446.202 kb on - strand, within AO353_11170 at 2446.202 kb on - strand, within AO353_11170 at 2446.202 kb on - strand, within AO353_11170 at 2446.326 kb on + strand, within AO353_11170 at 2446.327 kb on - strand, within AO353_11170 at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.347 kb on + strand at 2446.348 kb on - strand at 2446.348 kb on - strand at 2446.491 kb on + strand at 2446.491 kb on + strand at 2446.492 kb on - strand at 2446.537 kb on - strand at 2446.669 kb on - strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.998 kb on + strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2446.999 kb on - strand at 2447.050 kb on + strand at 2447.062 kb on + strand at 2447.063 kb on - strand at 2447.063 kb on - strand at 2447.068 kb on + strand at 2447.069 kb on - strand at 2447.132 kb on - strand at 2447.132 kb on - strand at 2447.132 kb on - strand at 2447.132 kb on - strand at 2447.232 kb on + strand at 2447.232 kb on + strand at 2447.232 kb on + strand at 2447.233 kb on - strand at 2447.233 kb on - strand at 2447.233 kb on - strand at 2447.472 kb on + strand at 2447.473 kb on - strand at 2447.640 kb on + strand at 2447.675 kb on + strand at 2447.675 kb on + strand at 2447.676 kb on - strand at 2447.676 kb on - strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.690 kb on + strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.691 kb on - strand at 2447.768 kb on + strand at 2447.769 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 2,445,833 + AO353_11170 0.64 -1.0 2,445,833 + AO353_11170 0.64 -0.7 2,445,833 + AO353_11170 0.64 -1.4 2,445,833 + AO353_11170 0.64 -0.2 2,445,834 - AO353_11170 0.64 -0.5 2,445,834 - AO353_11170 0.64 -0.6 2,445,834 - AO353_11170 0.64 +0.3 2,445,834 - AO353_11170 0.64 -0.4 2,445,834 - AO353_11170 0.64 -0.1 2,445,834 - AO353_11170 0.64 -1.1 2,445,834 - AO353_11170 0.64 +0.5 2,445,876 + AO353_11170 0.66 -1.8 2,445,876 + AO353_11170 0.66 -1.0 2,445,876 + AO353_11170 0.66 +0.4 2,445,876 + AO353_11170 0.66 +0.7 2,445,876 + AO353_11170 0.66 +0.2 2,445,876 + AO353_11170 0.66 +0.1 2,445,877 - AO353_11170 0.66 -0.7 2,445,877 - AO353_11170 0.66 +2.1 2,445,877 - AO353_11170 0.66 +1.7 2,445,877 - AO353_11170 0.66 +0.2 2,445,877 - AO353_11170 0.66 -0.2 2,445,924 + AO353_11170 0.68 -0.1 2,445,924 + AO353_11170 0.68 +0.9 2,445,924 + AO353_11170 0.68 +0.9 2,445,924 + AO353_11170 0.68 -0.2 2,445,925 - AO353_11170 0.68 +0.3 2,445,925 - AO353_11170 0.68 +0.4 2,445,925 - AO353_11170 0.68 -0.1 2,445,925 - AO353_11170 0.68 -1.7 2,445,925 - AO353_11170 0.68 +0.1 2,445,925 - AO353_11170 0.68 +0.9 2,446,127 + AO353_11170 0.79 +0.1 2,446,127 + AO353_11170 0.79 -0.5 2,446,128 - AO353_11170 0.79 +0.1 2,446,128 - AO353_11170 0.79 -2.2 2,446,201 + AO353_11170 0.83 -1.7 2,446,201 + AO353_11170 0.83 +1.1 2,446,202 - AO353_11170 0.83 +1.1 2,446,202 - AO353_11170 0.83 -0.8 2,446,202 - AO353_11170 0.83 +1.2 2,446,202 - AO353_11170 0.83 +1.5 2,446,202 - AO353_11170 0.83 +0.9 2,446,326 + AO353_11170 0.89 +0.3 2,446,327 - AO353_11170 0.89 +0.1 2,446,347 + +1.5 2,446,347 + -1.4 2,446,347 + -0.4 2,446,347 + -1.1 2,446,347 + +1.0 2,446,347 + -1.3 2,446,347 + +0.6 2,446,347 + -2.3 2,446,347 + -0.9 2,446,348 - -2.1 2,446,348 - -1.0 2,446,491 + -0.8 2,446,491 + -0.2 2,446,492 - +1.7 2,446,537 - -1.0 2,446,669 - +0.3 2,446,998 + -0.1 2,446,998 + -1.5 2,446,998 + -0.1 2,446,998 + -0.8 2,446,998 + -1.6 2,446,998 + +1.4 2,446,998 + -0.6 2,446,998 + +1.2 2,446,998 + -1.1 2,446,998 + -0.1 2,446,999 - -1.0 2,446,999 - +0.1 2,446,999 - -0.9 2,446,999 - -0.9 2,446,999 - -0.2 2,446,999 - +0.5 2,446,999 - -0.5 2,446,999 - +0.7 2,447,050 + -1.6 2,447,062 + -0.8 2,447,063 - +0.9 2,447,063 - -1.1 2,447,068 + +1.6 2,447,069 - -2.2 2,447,132 - -0.6 2,447,132 - +1.0 2,447,132 - +0.1 2,447,132 - +0.8 2,447,232 + -1.0 2,447,232 + +1.0 2,447,232 + +2.1 2,447,233 - -2.2 2,447,233 - -0.2 2,447,233 - -0.5 2,447,472 + +0.5 2,447,473 - +1.1 2,447,640 + -1.2 2,447,675 + -1.0 2,447,675 + -0.2 2,447,676 - -1.3 2,447,676 - -2.3 2,447,690 + -0.1 2,447,690 + +0.2 2,447,690 + -0.7 2,447,690 + -0.5 2,447,690 + +0.2 2,447,690 + -0.8 2,447,690 + -0.2 2,447,690 + -0.7 2,447,690 + +0.5 2,447,690 + -1.7 2,447,690 + +1.2 2,447,691 - +0.5 2,447,691 - +1.7 2,447,691 - +1.2 2,447,691 - -0.7 2,447,691 - -1.6 2,447,691 - +0.2 2,447,691 - -0.5 2,447,691 - -1.0 2,447,691 - +0.3 2,447,691 - +0.3 2,447,691 - +0.1 2,447,691 - -0.8 2,447,768 + +0.2 2,447,769 - +0.8
Or see this region's nucleotide sequence