Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10240

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
2,241,539	+		AO353_10235	0.64	+0.4
2,241,540	-		AO353_10235	0.64	-1.1
2,241,540	-		AO353_10235	0.64	-0.4
2,241,540	-		AO353_10235	0.64	+1.5
2,241,640	+		AO353_10235	0.70	+1.6
2,241,641	-		AO353_10235	0.70	+0.3
2,241,641	-		AO353_10235	0.70	+0.4
2,241,641	-		AO353_10235	0.70	+0.5
2,241,641	-		AO353_10235	0.70	+0.4
2,241,641	-		AO353_10235	0.70	-0.4
2,241,665	+		AO353_10235	0.72	-0.6
2,241,843	-		AO353_10235	0.83	-0.6
2,241,843	-		AO353_10235	0.83	+2.2
2,242,009	-				-0.2
2,242,026	+				-0.1
2,242,026	+				+0.2
2,242,026	+				+0.9
2,242,026	+				+1.0
2,242,026	+				-1.8
2,242,026	+				+1.6
2,242,027	-				+0.6
2,242,027	-				-1.5
2,242,027	-				+1.1
2,242,027	-				-0.4
2,242,027	-				-0.9
2,242,027	-				-0.0
2,242,027	-				-1.0
2,242,027	-				-0.9
2,242,027	-				-2.2
2,242,027	-				+0.9
2,242,027	-				+0.7
2,242,027	-				+0.5
2,242,029	+				+0.4
2,242,029	+				-0.6
2,242,029	+				+2.3
2,242,029	+				+1.9
2,242,030	-				-0.1
2,242,030	-				-0.8
2,242,030	-				-0.8
2,242,030	-				+1.1
2,242,030	-				+0.4
2,242,030	-				+0.9
2,242,030	-				-0.4
2,242,030	-				+1.8
2,242,030	-				+1.5
2,242,030	-				+0.9
2,242,035	+				+0.9
2,242,036	-				-0.1
2,242,036	-				+1.2
2,242,036	-				+1.0
2,242,086	+				-0.1
2,242,087	-				-0.1
2,242,143	+				+2.5
2,242,143	+				+1.7
2,242,143	+				+0.1
2,242,143	+				+1.2
2,242,143	+				+2.3
2,242,143	+				+0.9
2,242,143	+				+0.5
2,242,143	+				-1.0
2,242,143	+				+1.7
2,242,143	+				+1.3
2,242,144	-				+0.4
2,242,144	-				-0.9
2,242,144	-				+0.8
2,242,144	-				+1.2
2,242,144	-				+1.4
2,242,144	-				+3.6
2,242,144	-				-0.9
2,242,144	-				-0.4
2,242,144	-				-0.0
2,242,144	-				+1.3
2,242,172	+				-0.6
2,242,172	+				+1.3
2,242,173	-				+1.5
2,242,209	+				+2.3
2,242,209	+				-0.5
2,242,209	+				-0.8
2,242,209	+				+1.1
2,242,209	+				-0.6
2,242,209	+				-0.5
2,242,209	+				+0.8
2,242,209	+				+0.1
2,242,209	+				+0.7
2,242,210	-				+0.4
2,242,210	-				-0.7
2,242,210	-				+2.1
2,242,210	-				-0.5
2,242,210	-				+1.6
2,242,210	-				-2.3
2,242,210	-				+1.7
2,242,222	+				+2.1
2,242,223	-				-0.4
2,242,223	-				+0.8
2,242,223	-				-0.3
2,242,223	-				+0.9
2,242,290	+				+0.1
2,242,290	+				+0.1
2,242,290	+				+1.1
2,242,291	-				-0.8
2,242,291	-				-0.1
2,242,291	-				+4.8
2,242,291	-				-0.6
2,242,291	-				-0.6
2,242,291	-				-0.2
2,242,291	-				-0.8
2,242,291	-				-0.6
2,242,331	+				-1.4
2,242,331	+				+0.1
2,242,331	+				+1.8
2,242,332	-				-1.3
2,242,332	-				-1.6
2,242,332	-				-0.3
2,242,342	-				+1.5
2,242,342	-				+0.1
2,242,342	-				+0.5
2,242,342	-				-0.8
2,242,342	-				-0.6
2,242,342	-				+0.1
2,242,342	-				+1.5
2,242,376	+				+2.5
2,242,376	+				+0.5
2,242,377	-				-0.9
2,242,421	+				+1.4
2,242,421	+				+1.3
2,242,421	+				+1.1
2,242,421	+				+0.6
2,242,421	+				+0.1
2,242,421	+				+1.3
2,242,422	-				-1.5
2,242,422	-				+0.5
2,242,422	-				-1.7
2,242,422	-				+0.4
2,242,422	-				-0.5
2,242,422	-				+0.7
2,242,439	+				+0.5
2,242,481	-				+0.5
2,242,572	+				+2.4
2,242,573	-				+1.7
2,242,573	-				-0.8
2,242,573	-				-0.7
2,242,573	-				-0.0
2,242,573	-				+0.5
2,242,644	-		AO353_10240	0.12	+1.1
2,242,754	-		AO353_10240	0.24	+0.3
2,242,826	-		AO353_10240	0.32	-0.3
2,242,836	-		AO353_10240	0.33	+1.2
2,242,836	-		AO353_10240	0.33	+0.9
2,242,836	-		AO353_10240	0.33	-1.4
2,242,836	-		AO353_10240	0.33	-1.0
2,242,836	-		AO353_10240	0.33	+1.9
2,242,857	-		AO353_10240	0.36	-0.0
2,242,857	-		AO353_10240	0.36	-1.0
2,242,922	-		AO353_10240	0.43	+2.1
2,242,993	-		AO353_10240	0.50	-0.3
2,242,993	-		AO353_10240	0.50	+1.1
2,243,165	+		AO353_10240	0.69	+2.2
2,243,166	-		AO353_10240	0.69	+0.1
2,243,205	-		AO353_10240	0.74	-0.1
2,243,205	-		AO353_10240	0.74	+0.2
2,243,205	-		AO353_10240	0.74	+1.1
2,243,205	-		AO353_10240	0.74	-2.1
2,243,205	-		AO353_10240	0.74	+0.8
2,243,205	-		AO353_10240	0.74	+0.2
2,243,384	-				-0.2
2,243,384	-				+1.4
2,243,384	-				+0.7
2,243,384	-				+0.5
2,243,384	-				+1.5
2,243,384	-				-0.6
2,243,384	-				-1.4
2,243,491	+				+1.2
2,243,521	+				+2.5
2,243,521	+				-1.6
2,243,521	+				+0.2
2,243,522	-				+1.3
2,243,522	-				+0.5
2,243,522	-				-2.2
2,243,523	+				-0.3
2,243,523	+				+2.5
2,243,523	+				+0.2
2,243,523	+				+0.1
2,243,523	+				+1.7
2,243,523	+				+1.4
2,243,523	+				-0.7
2,243,523	+				+1.0
2,243,524	-				-1.1
2,243,524	-				-1.5
2,243,605	+		AO353_10245	0.17	-0.9
2,243,605	+		AO353_10245	0.17	+0.7
2,243,605	+		AO353_10245	0.17	+0.2
2,243,605	+		AO353_10245	0.17	+1.2
2,243,606	-		AO353_10245	0.17	-0.7
2,243,606	-		AO353_10245	0.17	+0.1
2,243,677	+		AO353_10245	0.24	-1.1
2,243,677	+		AO353_10245	0.24	+0.1
2,243,677	+		AO353_10245	0.24	-0.1
2,243,677	+		AO353_10245	0.24	-0.3
2,243,677	+		AO353_10245	0.24	+2.1
2,243,677	+		AO353_10245	0.24	+1.2
2,243,677	+		AO353_10245	0.24	+0.4
2,243,677	+		AO353_10245	0.24	-1.7
2,243,677	+		AO353_10245	0.24	+1.1
2,243,677	+		AO353_10245	0.24	-0.6
2,243,677	+		AO353_10245	0.24	+1.9
2,243,678	-		AO353_10245	0.24	-0.5
2,243,678	-		AO353_10245	0.24	+0.1
2,243,678	-		AO353_10245	0.24	+0.3
2,243,678	-		AO353_10245	0.24	-0.9
2,243,678	-		AO353_10245	0.24	+0.9
2,243,678	-		AO353_10245	0.24	-0.1
2,243,678	-		AO353_10245	0.24	+0.1
2,243,678	-		AO353_10245	0.24	-1.1
2,243,678	-		AO353_10245	0.24	-0.1
2,243,678	-		AO353_10245	0.24	-0.6
2,243,678	-		AO353_10245	0.24	+0.4
2,243,678	-		AO353_10245	0.24	+0.1
2,243,678	-		AO353_10245	0.24	-2.0
2,243,678	-		AO353_10245	0.24	+0.4
2,243,678	-		AO353_10245	0.24	+0.1
2,243,678	-		AO353_10245	0.24	+1.3
2,243,678	-		AO353_10245	0.24	-1.2
2,243,678	-		AO353_10245	0.24	-0.1
2,243,678	-		AO353_10245	0.24	-0.2
2,243,678	-		AO353_10245	0.24	-0.6
2,243,678	-		AO353_10245	0.24	-0.2
2,243,679	+		AO353_10245	0.24	+1.5
2,243,806	+		AO353_10245	0.37	-0.5
2,243,806	+		AO353_10245	0.37	-2.1
2,243,806	+		AO353_10245	0.37	-0.9
2,243,807	-		AO353_10245	0.37	-0.9
2,243,807	-		AO353_10245	0.37	+0.4
2,243,876	-		AO353_10245	0.45	-2.0
2,243,908	+		AO353_10245	0.48	+1.5
2,243,909	-		AO353_10245	0.48	-2.9
2,243,932	+		AO353_10245	0.50	-0.9
2,243,933	-		AO353_10245	0.50	-0.4
2,243,961	+		AO353_10245	0.53	+0.6
2,244,118	+		AO353_10245	0.69	-0.3
2,244,118	+		AO353_10245	0.69	-2.2
2,244,118	+		AO353_10245	0.69	-1.4
2,244,118	+		AO353_10245	0.69	-0.9
2,244,118	+		AO353_10245	0.69	+0.6
2,244,118	+		AO353_10245	0.69	-1.9
2,244,118	+		AO353_10245	0.69	+0.9
2,244,118	+		AO353_10245	0.69	+0.1
2,244,118	+		AO353_10245	0.69	+0.5
2,244,118	+		AO353_10245	0.69	+1.1
2,244,118	+		AO353_10245	0.69	+3.0
2,244,119	-		AO353_10245	0.70	+0.1
2,244,119	-		AO353_10245	0.70	-0.1
2,244,119	-		AO353_10245	0.70	+0.6
2,244,119	-		AO353_10245	0.70	+0.6
2,244,119	-		AO353_10245	0.70	+0.4
2,244,170	+		AO353_10245	0.75	+1.6
2,244,171	-		AO353_10245	0.75	+0.3
2,244,242	-		AO353_10245	0.82	+1.7
2,244,242	-		AO353_10245	0.82	+1.0
2,244,412	+				-0.2
2,244,412	+				+0.1
2,244,412	+				-0.5
2,244,412	+				+0.4
2,244,412	+				-0.4
2,244,413	-				-0.6