Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09845

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
2,148,555	+				+1.4
2,148,556	-				+2.6
2,148,556	-				-0.5
2,148,556	-				-0.5
2,148,718	+		AO353_09835	0.78	+0.4
2,148,718	+		AO353_09835	0.78	-0.1
2,148,718	+		AO353_09835	0.78	+2.1
2,148,718	+		AO353_09835	0.78	-1.6
2,148,718	+		AO353_09835	0.78	-0.9
2,148,718	+		AO353_09835	0.78	+0.4
2,148,718	+		AO353_09835	0.78	-0.3
2,148,719	-		AO353_09835	0.78	-2.2
2,148,719	-		AO353_09835	0.78	+1.1
2,148,719	-		AO353_09835	0.78	+0.1
2,148,756	+				+1.1
2,148,756	+				+2.6
2,148,756	+				-0.3
2,148,757	-				-0.1
2,148,757	-				+0.1
2,148,785	-				-1.3
2,148,839	+				-0.9
2,148,881	-				+0.5
2,148,918	+				+0.6
2,148,919	-				+1.1
2,148,945	+				+0.6
2,149,203	+		AO353_09840	0.44	-0.7
2,149,203	+		AO353_09840	0.44	+1.5
2,149,203	+		AO353_09840	0.44	+1.8
2,149,203	+		AO353_09840	0.44	+0.5
2,149,203	+		AO353_09840	0.44	-1.2
2,149,203	+		AO353_09840	0.44	-0.2
2,149,203	+		AO353_09840	0.44	+1.3
2,149,203	+		AO353_09840	0.44	-0.9
2,149,203	+		AO353_09840	0.44	-0.2
2,149,204	-		AO353_09840	0.44	+4.7
2,149,204	-		AO353_09840	0.44	+2.0
2,149,204	-		AO353_09840	0.44	+5.6
2,149,204	-		AO353_09840	0.44	+1.7
2,149,204	-		AO353_09840	0.44	+1.6
2,149,204	-		AO353_09840	0.44	+4.0
2,149,204	-		AO353_09840	0.44	+3.8
2,149,204	-		AO353_09840	0.44	+4.6
2,149,283	+		AO353_09840	0.58	+0.5
2,149,284	-		AO353_09840	0.58	+3.6
2,149,284	-		AO353_09840	0.58	+3.0
2,149,368	+		AO353_09840	0.73	-0.3
2,149,468	+				-1.3
2,149,468	+				+0.9
2,149,468	+				+1.0
2,149,468	+				+2.4
2,149,468	+				-0.8
2,149,469	-				+3.6
2,149,469	-				+2.0
2,149,523	+				+1.4
2,149,523	+				-1.9
2,149,523	+				+0.0
2,149,523	+				+1.7
2,150,396	+				-1.3
2,150,397	-				+1.7
2,150,397	-				+2.3
2,150,397	-				-0.5
2,150,418	+				-1.7
2,150,418	+				-0.5
2,150,444	+				+1.0
2,150,444	+				+1.0
2,150,444	+				+0.0
2,150,444	+				-0.2
2,150,444	+				-0.8
2,150,445	-				-1.0
2,150,445	-				+0.6
2,150,445	-				-1.8
2,150,445	-				-1.9
2,150,445	-				-0.7
2,150,445	-				+0.3
2,150,445	-				+0.0
2,150,445	-				+2.3
2,150,449	+				-1.2
2,150,449	+				+1.0
2,150,449	+				+1.2
2,150,449	+				-1.0
2,150,450	-				-0.8
2,150,450	-				+0.6
2,150,450	-				-1.0
2,150,450	-				+0.2
2,150,450	-				-0.1
2,150,450	-				+0.0
2,150,450	-				-0.1
2,150,450	-				-1.0
2,150,450	-				+1.9
2,150,450	-				-0.7
2,150,450	-				-0.6
2,150,450	-				+0.5
2,150,450	-				+1.8
2,150,450	-				+0.5
2,150,450	-				+0.8
2,150,450	-				-0.1
2,150,450	-				-0.5
2,150,450	-				-0.1
2,150,452	+				-0.2
2,150,452	+				-0.7
2,150,453	-				+0.4
2,150,457	+				-2.4
2,150,458	-				+0.5
2,150,458	-				-0.0
2,150,501	+				+0.8
2,150,501	+				-0.9
2,150,501	+				-1.5
2,150,501	+				-0.8
2,150,501	+				-0.9
2,150,501	+				-0.8
2,150,502	-				-0.3
2,150,502	-				-0.7
2,150,502	-				-1.1
2,150,502	-				+0.5
2,150,502	-				+0.5
2,150,502	-				+0.5
2,150,502	-				+1.4
2,150,502	-				-1.0
2,150,502	-				+0.1
2,150,502	-				+2.2
2,150,502	-				+0.1
2,150,505	+				-1.1
2,150,505	+				-0.1
2,150,505	+				-0.4
2,150,505	+				-0.5
2,150,505	+				-0.3
2,150,505	+				-0.9
2,150,505	+				+0.2
2,150,505	+				-0.6
2,150,505	+				-0.7
2,150,506	-				-0.1
2,150,506	-				+1.2
2,150,506	-				+1.0
2,150,506	-				+1.5
2,150,506	-				+1.2
2,150,506	-				-0.3
2,150,506	-				+0.4
2,150,506	-				+1.3
2,150,585	+		AO353_09850	0.22	-0.0
2,150,585	+		AO353_09850	0.22	-0.9
2,150,585	+		AO353_09850	0.22	+0.3
2,150,585	+		AO353_09850	0.22	+0.2
2,150,586	-		AO353_09850	0.22	-0.7
2,150,586	-		AO353_09850	0.22	-0.1
2,150,586	-		AO353_09850	0.22	+1.4
2,150,600	+		AO353_09850	0.26	+0.0
2,150,600	+		AO353_09850	0.26	-0.5
2,150,603	+		AO353_09850	0.27	+0.6
2,150,603	+		AO353_09850	0.27	+0.0
2,150,603	+		AO353_09850	0.27	+2.5
2,150,603	+		AO353_09850	0.27	+0.3
2,150,604	-		AO353_09850	0.27	-0.8
2,150,604	-		AO353_09850	0.27	-0.1
2,150,604	-		AO353_09850	0.27	+0.7
2,150,604	-		AO353_09850	0.27	+0.7
2,150,604	-		AO353_09850	0.27	-0.9
2,150,604	-		AO353_09850	0.27	+1.2
2,150,748	+		AO353_09850	0.65	-1.4
2,150,748	+		AO353_09850	0.65	-0.4
2,150,748	+		AO353_09850	0.65	+1.0
2,150,748	+		AO353_09850	0.65	+0.6
2,150,748	+		AO353_09850	0.65	-0.9
2,150,748	+		AO353_09850	0.65	-1.9
2,150,748	+		AO353_09850	0.65	-0.1
2,150,748	+		AO353_09850	0.65	-0.3
2,150,748	+		AO353_09850	0.65	+1.0
2,150,748	+		AO353_09850	0.65	+0.2
2,150,749	-		AO353_09850	0.65	+0.9
2,150,749	-		AO353_09850	0.65	+0.5
2,150,749	-		AO353_09850	0.65	-0.4
2,150,749	-		AO353_09850	0.65	-0.3
2,150,749	-		AO353_09850	0.65	+1.2
2,150,749	-		AO353_09850	0.65	-0.1
2,150,749	-		AO353_09850	0.65	+0.2
2,150,749	-		AO353_09850	0.65	-1.0
2,150,750	+		AO353_09850	0.65	+0.3
2,150,750	+		AO353_09850	0.65	+1.7
2,150,750	+		AO353_09850	0.65	-0.5
2,150,750	+		AO353_09850	0.65	+0.9
2,150,750	+		AO353_09850	0.65	-1.2
2,150,750	+		AO353_09850	0.65	+0.3
2,150,750	+		AO353_09850	0.65	+0.0
2,150,750	+		AO353_09850	0.65	+1.0
2,150,750	+		AO353_09850	0.65	-1.2
2,150,751	-		AO353_09850	0.65	-0.6
2,150,751	-		AO353_09850	0.65	+1.2
2,150,751	-		AO353_09850	0.65	-1.4
2,150,751	-		AO353_09850	0.65	-0.5
2,150,751	-		AO353_09850	0.65	+1.3
2,150,751	-		AO353_09850	0.65	-0.1
2,150,751	-		AO353_09850	0.65	+1.0
2,150,751	-		AO353_09850	0.65	-0.4
2,150,751	-		AO353_09850	0.65	-0.3
2,150,751	-		AO353_09850	0.65	+0.8
2,150,751	-		AO353_09850	0.65	+1.6
2,150,751	-		AO353_09850	0.65	+1.7
2,150,751	-		AO353_09850	0.65	-1.2
2,150,751	-		AO353_09850	0.65	-0.2
2,150,751	-		AO353_09850	0.65	+0.7
2,150,769	+		AO353_09850	0.70	+1.4
2,150,827	+		AO353_09850	0.85	+0.5
2,150,873	+				-0.1
2,150,873	+				-0.4
2,150,873	+				+0.9
2,150,873	+				-0.2
2,150,874	-				+0.5
2,150,874	-				+1.7
2,150,874	-				+0.7
2,150,874	-				-0.5
2,150,874	-				-1.9
2,150,874	-				-0.3
2,150,874	-				+1.2
2,150,874	-				-2.1
2,150,874	-				-0.3
2,150,874	-				-0.8
2,150,919	+				-1.0
2,150,919	+				+0.4
2,150,919	+				+0.1
2,150,919	+				-1.6
2,150,919	+				-1.4
2,150,919	+				+0.0
2,150,919	+				+1.4
2,150,919	+				-0.9
2,150,919	+				-1.5
2,150,920	-				-2.5
2,150,920	-				-0.5
2,150,920	-				-0.7
2,150,920	-				-0.5
2,150,926	+				-0.4
2,150,926	+				+1.5
2,150,926	+				+1.5
2,150,926	+				-0.7
2,150,926	+				-0.3
2,150,926	+				-1.6
2,150,926	+				-0.0
2,150,926	+				-1.2
2,150,926	+				+1.1
2,150,926	+				-1.4
2,150,926	+				-0.5
2,150,927	-				-0.3
2,150,927	-				-1.0
2,150,927	-				-1.8
2,150,927	-				-1.0
2,150,927	-				-1.7
2,150,927	-				-0.3
2,150,927	-				-0.0
2,150,927	-				+1.2
2,150,957	+				+1.3
2,150,962	+				-1.0
2,150,962	+				-0.4
2,150,962	+				+1.0
2,150,962	+				-0.5
2,150,963	-				-0.5
2,150,963	-				+0.1
2,150,963	-				-0.0
2,150,963	-				-0.8
2,150,963	-				-0.3
2,150,963	-				+1.2
2,150,963	-				-1.3
2,150,981	+				-1.3
2,150,981	+				+1.4
2,150,981	+				+0.2
2,150,981	+				-1.0
2,150,981	+				+1.1
2,150,981	+				+1.2
2,150,982	-				-1.5
2,150,982	-				+1.2
2,150,982	-				-1.4
2,150,994	+				+0.0
2,150,994	+				+0.5
2,150,994	+				-0.7
2,150,994	+				+0.2
2,150,994	+				-0.3
2,150,994	+				+1.0
2,150,994	+				-0.1
2,150,994	+				+1.9
2,150,994	+				+0.4
2,150,994	+				+2.7
2,150,994	+				-1.9
2,150,995	-				+0.2
2,150,995	-				+0.5
2,150,995	-				-1.2
2,150,995	-				+0.2
2,150,995	-				+0.7
2,150,995	-				-0.5
2,150,995	-				-1.7
2,150,995	-				+0.3
2,150,995	-				-0.4
2,150,995	-				+0.6
2,150,995	-				+1.5
2,150,995	-				-0.3
2,151,013	+				+1.8
2,151,013	+				+0.4
2,151,013	+				+1.5
2,151,013	+				-0.2
2,151,014	-				+1.8
2,151,014	-				-1.9
2,151,014	-				-2.6
2,151,014	-				+1.8
2,151,014	-				-0.5
2,151,014	-				+1.6
2,151,014	-				+0.5
2,151,014	-				-0.1
2,151,014	-				+2.1
2,151,014	-				-0.4
2,151,014	-				-1.3
2,151,029	+				+0.7
2,151,029	+				+0.1
2,151,029	+				+0.1
2,151,116	+		AO353_09855	0.12	-0.6
2,151,116	+		AO353_09855	0.12	+0.5
2,151,116	+		AO353_09855	0.12	-1.9
2,151,116	+		AO353_09855	0.12	-0.5
2,151,117	-		AO353_09855	0.12	-1.0
2,151,117	-		AO353_09855	0.12	+0.2
2,151,341	+		AO353_09855	0.44	+0.6
2,151,341	+		AO353_09855	0.44	+0.5
2,151,341	+		AO353_09855	0.44	+2.4
2,151,341	+		AO353_09855	0.44	-0.0
2,151,341	+		AO353_09855	0.44	+0.7
2,151,341	+		AO353_09855	0.44	-0.2
2,151,341	+		AO353_09855	0.44	-1.0
2,151,342	-		AO353_09855	0.44	-0.3
2,151,342	-		AO353_09855	0.44	-1.5
2,151,342	-		AO353_09855	0.44	+0.2
2,151,342	-		AO353_09855	0.44	+0.7
2,151,342	-		AO353_09855	0.44	-0.7
2,151,342	-		AO353_09855	0.44	+1.3
2,151,342	-		AO353_09855	0.44	+0.1
2,151,342	-		AO353_09855	0.44	-1.4
2,151,342	-		AO353_09855	0.44	+0.6
2,151,342	-		AO353_09855	0.44	+0.0
2,151,342	-		AO353_09855	0.44	-0.7
2,151,342	-		AO353_09855	0.44	-1.9
2,151,342	-		AO353_09855	0.44	-0.3