Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08915

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,957,759	+		AO353_08905	0.86	-1.2
1,957,759	+		AO353_08905	0.86	-0.1
1,957,759	+		AO353_08905	0.86	-0.1
1,957,759	+		AO353_08905	0.86	-1.8
1,957,759	+		AO353_08905	0.86	-0.2
1,957,759	+		AO353_08905	0.86	+0.1
1,957,759	+		AO353_08905	0.86	+0.2
1,957,759	+		AO353_08905	0.86	+1.6
1,957,759	+		AO353_08905	0.86	+0.1
1,957,759	+		AO353_08905	0.86	-0.2
1,957,759	+		AO353_08905	0.86	-0.3
1,957,759	+		AO353_08905	0.86	-0.5
1,957,760	-		AO353_08905	0.87	+1.4
1,957,760	-		AO353_08905	0.87	+0.6
1,957,760	-		AO353_08905	0.87	-1.4
1,957,760	-		AO353_08905	0.87	+1.4
1,957,760	-		AO353_08905	0.87	-0.5
1,957,760	-		AO353_08905	0.87	-1.0
1,957,760	-		AO353_08905	0.87	-2.0
1,957,760	-		AO353_08905	0.87	-0.9
1,957,760	-		AO353_08905	0.87	+0.6
1,957,760	-		AO353_08905	0.87	+0.6
1,957,760	-		AO353_08905	0.87	+0.4
1,957,761	+		AO353_08905	0.87	+0.9
1,957,761	+		AO353_08905	0.87	-0.5
1,957,761	+		AO353_08905	0.87	+1.9
1,957,761	+		AO353_08905	0.87	-1.8
1,957,761	+		AO353_08905	0.87	-2.1
1,957,761	+		AO353_08905	0.87	-1.2
1,957,761	+		AO353_08905	0.87	-1.4
1,957,761	+		AO353_08905	0.87	-0.5
1,957,761	+		AO353_08905	0.87	-0.2
1,957,762	-		AO353_08905	0.87	+0.6
1,957,762	-		AO353_08905	0.87	+0.5
1,957,762	-		AO353_08905	0.87	+1.4
1,957,762	-		AO353_08905	0.87	+1.3
1,957,762	-		AO353_08905	0.87	+0.0
1,957,762	-		AO353_08905	0.87	+0.4
1,957,762	-		AO353_08905	0.87	+1.4
1,957,762	-		AO353_08905	0.87	+1.4
1,957,762	-		AO353_08905	0.87	+0.7
1,957,803	+				+0.7
1,957,803	+				+0.8
1,957,803	+				-0.8
1,957,803	+				-0.4
1,957,803	+				-0.1
1,957,804	-				+0.1
1,957,804	-				-1.6
1,957,804	-				-0.2
1,957,804	-				+0.8
1,957,804	-				-0.9
1,957,804	-				+1.2
1,957,804	-				+0.8
1,957,804	-				-0.9
1,957,846	+				+0.5
1,957,847	-				+1.6
1,958,019	-		AO353_08910	0.28	+2.2
1,958,167	+		AO353_08910	0.61	-0.1
1,958,168	-		AO353_08910	0.61	-0.4
1,958,168	-		AO353_08910	0.61	-0.3
1,958,352	+				-0.6
1,958,352	+				+3.0
1,958,353	-				+0.4
1,958,353	-				+1.0
1,958,353	-				-0.4
1,958,353	-				-2.0
1,958,389	+				-0.4
1,958,436	+				-1.3
1,958,436	+				-0.4
1,958,475	-				-0.2
1,958,480	+				+0.2
1,958,523	+				+0.6
1,958,523	+				-0.4
1,958,524	-				-0.7
1,958,524	-				+1.6
1,958,525	+				-1.0
1,958,525	+				-1.7
1,958,525	+				-1.0
1,958,525	+				-2.0
1,958,525	+				-0.0
1,958,525	+				+1.5
1,958,525	+				-2.2
1,958,525	+				+1.1
1,958,525	+				+0.8
1,958,525	+				-0.7
1,958,525	+				-0.9
1,958,525	+				+1.0
1,958,525	+				-1.0
1,958,525	+				-1.4
1,958,525	+				-1.9
1,958,525	+				+0.5
1,958,525	+				+1.4
1,958,525	+				-0.6
1,958,526	-				-1.3
1,958,526	-				+0.1
1,958,526	-				-0.1
1,958,526	-				-0.0
1,958,526	-				+1.6
1,958,526	-				-1.7
1,958,526	-				-1.1
1,958,526	-				+1.0
1,958,526	-				-1.3
1,958,526	-				-0.1
1,958,526	-				-0.1
1,958,526	-				+1.6
1,958,526	-				-1.2
1,958,526	-				+1.0
1,958,526	-				-1.1
1,958,573	+				-0.9
1,958,817	+		AO353_08915	0.18	+0.3
1,958,856	-		AO353_08915	0.20	-0.0
1,958,954	+		AO353_08915	0.25	+0.6
1,958,954	+		AO353_08915	0.25	-0.0
1,958,954	+		AO353_08915	0.25	-0.2
1,958,954	+		AO353_08915	0.25	-1.0
1,958,954	+		AO353_08915	0.25	-0.4
1,958,954	+		AO353_08915	0.25	+0.1
1,958,955	-		AO353_08915	0.25	+0.1
1,958,955	-		AO353_08915	0.25	+4.8
1,958,955	-		AO353_08915	0.25	+1.0
1,958,955	-		AO353_08915	0.25	+1.8
1,959,083	+		AO353_08915	0.32	+1.2
1,959,084	-		AO353_08915	0.32	-1.0
1,959,084	-		AO353_08915	0.32	-1.2
1,959,084	-		AO353_08915	0.32	-1.8
1,959,084	-		AO353_08915	0.32	+1.4
1,959,084	-		AO353_08915	0.32	-1.8
1,959,084	-		AO353_08915	0.32	+3.8
1,959,254	+		AO353_08915	0.41	+0.2
1,959,254	+		AO353_08915	0.41	+0.1
1,959,254	+		AO353_08915	0.41	-0.8
1,959,254	+		AO353_08915	0.41	+0.1
1,959,254	+		AO353_08915	0.41	+1.3
1,959,254	+		AO353_08915	0.41	-0.5
1,959,254	+		AO353_08915	0.41	+0.2
1,959,254	+		AO353_08915	0.41	-0.6
1,959,254	+		AO353_08915	0.41	-0.2
1,959,254	+		AO353_08915	0.41	+0.7
1,959,254	+		AO353_08915	0.41	-1.1
1,959,254	+		AO353_08915	0.41	-2.3
1,959,254	+		AO353_08915	0.41	+0.8
1,959,254	+		AO353_08915	0.41	-0.0
1,959,254	+		AO353_08915	0.41	+0.4
1,959,254	+		AO353_08915	0.41	+0.1
1,959,254	+		AO353_08915	0.41	-0.3
1,959,254	+		AO353_08915	0.41	-0.3
1,959,254	+		AO353_08915	0.41	+2.1
1,959,254	+		AO353_08915	0.41	-0.8
1,959,254	+		AO353_08915	0.41	-0.0
1,959,254	+		AO353_08915	0.41	+2.9
1,959,254	+		AO353_08915	0.41	-0.0
1,959,254	+		AO353_08915	0.41	+0.3
1,959,254	+		AO353_08915	0.41	-0.7
1,959,254	+		AO353_08915	0.41	-0.1
1,959,254	+		AO353_08915	0.41	-0.6
1,959,255	-		AO353_08915	0.41	-0.3
1,959,255	-		AO353_08915	0.41	-0.0
1,959,255	-		AO353_08915	0.41	+2.9
1,959,255	-		AO353_08915	0.41	-0.7
1,959,255	-		AO353_08915	0.41	-0.1
1,959,255	-		AO353_08915	0.41	-0.5
1,959,255	-		AO353_08915	0.41	+0.1
1,959,255	-		AO353_08915	0.41	+1.2
1,959,255	-		AO353_08915	0.41	+0.1
1,959,255	-		AO353_08915	0.41	-1.6
1,959,255	-		AO353_08915	0.41	+7.7
1,959,255	-		AO353_08915	0.41	-0.3
1,959,255	-		AO353_08915	0.41	-0.9
1,959,255	-		AO353_08915	0.41	-0.7
1,959,255	-		AO353_08915	0.41	+2.3
1,959,255	-		AO353_08915	0.41	-1.9
1,959,255	-		AO353_08915	0.41	-0.7
1,959,255	-		AO353_08915	0.41	-1.7
1,959,381	-		AO353_08915	0.47	+1.4
1,959,415	+		AO353_08915	0.49	+1.0
1,959,415	+		AO353_08915	0.49	+1.0
1,959,415	+		AO353_08915	0.49	+1.0
1,959,415	+		AO353_08915	0.49	-0.2
1,959,467	+		AO353_08915	0.52	-1.2
1,959,488	+		AO353_08915	0.53	+0.6
1,959,488	+		AO353_08915	0.53	-0.0
1,959,488	+		AO353_08915	0.53	+1.4
1,959,488	+		AO353_08915	0.53	-1.7
1,959,488	+		AO353_08915	0.53	+1.2
1,959,488	+		AO353_08915	0.53	+2.0
1,959,488	+		AO353_08915	0.53	+0.1
1,959,489	-		AO353_08915	0.53	-0.7
1,959,489	-		AO353_08915	0.53	+0.3
1,959,489	-		AO353_08915	0.53	-0.8
1,959,489	-		AO353_08915	0.53	+2.5
1,959,489	-		AO353_08915	0.53	-0.0
1,959,489	-		AO353_08915	0.53	+2.2
1,959,489	-		AO353_08915	0.53	+0.5
1,959,489	-		AO353_08915	0.53	-1.2
1,959,489	-		AO353_08915	0.53	+0.4
1,959,551	+		AO353_08915	0.56	-0.2
1,959,551	+		AO353_08915	0.56	-0.5
1,959,552	-		AO353_08915	0.57	-0.2
1,959,552	-		AO353_08915	0.57	-0.3
1,959,552	-		AO353_08915	0.57	+1.0
1,959,737	+		AO353_08915	0.66	-0.6
1,959,737	+		AO353_08915	0.66	-1.4
1,959,737	+		AO353_08915	0.66	+0.6
1,959,737	+		AO353_08915	0.66	-0.0
1,959,737	+		AO353_08915	0.66	+0.7
1,959,738	-		AO353_08915	0.66	+0.8
1,959,738	-		AO353_08915	0.66	+0.0
1,959,738	-		AO353_08915	0.66	-0.0
1,959,738	-		AO353_08915	0.66	+0.9
1,959,738	-		AO353_08915	0.66	+1.0
1,959,827	+		AO353_08915	0.71	+0.6
1,959,827	+		AO353_08915	0.71	+2.5
1,959,827	+		AO353_08915	0.71	+0.8
1,959,827	+		AO353_08915	0.71	-2.0
1,959,827	+		AO353_08915	0.71	+2.0
1,959,828	-		AO353_08915	0.71	-1.2
1,959,828	-		AO353_08915	0.71	+3.4
1,959,828	-		AO353_08915	0.71	+0.4
1,959,828	-		AO353_08915	0.71	-0.6
1,959,828	-		AO353_08915	0.71	+1.5
1,959,959	+		AO353_08915	0.78	-0.2
1,959,960	-		AO353_08915	0.78	-0.6
1,959,960	-		AO353_08915	0.78	-1.0
1,960,259	+				+0.3
1,960,259	+				-0.8
1,960,259	+				+0.4
1,960,259	+				-0.4
1,960,259	+				+0.4
1,960,259	+				+2.0
1,960,260	-				-0.6
1,960,260	-				-0.6
1,960,260	-				-0.5
1,960,260	-				-0.9
1,960,260	-				-1.0
1,960,260	-				-0.8
1,960,260	-				-0.0
1,960,260	-				+0.7
1,960,260	-				-0.7
1,960,260	-				-0.2
1,960,260	-				+0.2
1,960,260	-				+0.6
1,960,494	-				+1.4
1,960,540	+				+0.4
1,960,540	+				+0.5
1,960,540	+				+0.6
1,960,540	+				-1.4
1,960,540	+				+0.5
1,960,541	-				+0.6
1,960,541	-				-1.2
1,960,541	-				-1.0
1,960,541	-				+1.0
1,960,541	-				+0.4
1,960,541	-				-0.0
1,960,542	+				-0.6
1,960,542	+				+0.6
1,960,542	+				+1.0
1,960,542	+				-0.4
1,960,542	+				-0.3
1,960,542	+				+2.7
1,960,542	+				+0.1
1,960,542	+				-1.9
1,960,543	-				-0.2
1,960,543	-				+0.6
1,960,543	-				+0.4
1,960,543	-				-0.6
1,960,543	-				-1.6
1,960,543	-				-0.0
1,960,543	-				-1.8
1,960,543	-				-0.4
1,960,543	-				-0.2
1,960,543	-				-0.2
1,960,543	-				+0.6
1,960,543	-				-1.6
1,960,543	-				-1.0
1,960,543	-				+0.4
1,960,576	+				-0.2
1,960,663	+				-1.2
1,960,663	+				-0.3
1,960,664	-				-1.0
1,960,664	-				-0.5
1,960,664	-				-1.0
1,960,680	+				+0.3
1,960,680	+				+0.6
1,960,680	+				-0.9
1,960,680	+				+0.6
1,960,680	+				+0.3
1,960,680	+				+0.4
1,960,680	+				-1.6
1,960,681	-				+0.1
1,960,681	-				-1.7
1,960,681	-				-2.5
1,960,681	-				-0.2
1,960,726	+				+1.0
1,960,726	+				-1.7
1,960,726	+				+0.6
1,960,727	-				-1.2
1,960,727	-				-1.1
1,960,727	-				-0.3
1,960,727	-				+1.0
1,960,727	-				+0.1
1,960,760	+				+0.1
1,960,760	+				+1.2
1,960,760	+				-0.6
1,960,760	+				+1.0
1,960,760	+				-1.4
1,960,760	+				+0.6
1,960,761	-				+0.4
1,960,761	-				-1.6
1,960,761	-				-0.0
1,960,868	+		AO353_08920	0.13	+2.0
1,960,868	+		AO353_08920	0.13	+1.0
1,960,868	+		AO353_08920	0.13	+1.1
1,960,868	+		AO353_08920	0.13	+0.0
1,960,868	+		AO353_08920	0.13	-0.0
1,960,868	+		AO353_08920	0.13	+0.5
1,960,869	-		AO353_08920	0.13	+0.6
1,960,869	-		AO353_08920	0.13	-0.3
1,960,869	-		AO353_08920	0.13	-0.3
1,960,869	-		AO353_08920	0.13	+1.1
1,960,869	-		AO353_08920	0.13	-1.1
1,960,871	+		AO353_08920	0.13	-1.2
1,960,871	+		AO353_08920	0.13	-0.3
1,960,871	+		AO353_08920	0.13	+1.0
1,960,871	+		AO353_08920	0.13	-1.2
1,960,871	+		AO353_08920	0.13	-1.2
1,960,871	+		AO353_08920	0.13	+0.4
1,960,872	-		AO353_08920	0.13	-1.1
1,960,872	-		AO353_08920	0.13	+0.6
1,960,872	-		AO353_08920	0.13	-1.7
1,960,872	-		AO353_08920	0.13	+0.4
1,960,872	-		AO353_08920	0.13	+0.5
1,960,872	-		AO353_08920	0.13	-1.2
1,960,994	+		AO353_08920	0.22	+0.4
1,960,994	+		AO353_08920	0.22	-0.1
1,960,994	+		AO353_08920	0.22	+0.0
1,960,994	+		AO353_08920	0.22	-0.4
1,960,994	+		AO353_08920	0.22	+1.5
1,960,994	+		AO353_08920	0.22	-0.9
1,960,994	+		AO353_08920	0.22	-2.8
1,960,994	+		AO353_08920	0.22	-1.0
1,960,994	+		AO353_08920	0.22	-1.2
1,960,995	-		AO353_08920	0.22	-0.6
1,960,995	-		AO353_08920	0.22	+0.3
1,960,995	-		AO353_08920	0.22	-0.9
1,960,995	-		AO353_08920	0.22	+0.2
1,960,995	-		AO353_08920	0.22	-1.1
1,960,995	-		AO353_08920	0.22	-0.6
1,960,995	-		AO353_08920	0.22	-1.7
1,960,995	-		AO353_08920	0.22	-2.0
1,960,995	-		AO353_08920	0.22	+1.0
1,960,995	-		AO353_08920	0.22	-1.2
1,961,051	+		AO353_08920	0.26	+0.4
1,961,051	+		AO353_08920	0.26	+0.3
1,961,051	+		AO353_08920	0.26	+1.6
1,961,051	+		AO353_08920	0.26	-0.7
1,961,052	-		AO353_08920	0.26	-0.4
1,961,052	-		AO353_08920	0.26	-0.3
1,961,052	-		AO353_08920	0.26	+1.0
1,961,052	-		AO353_08920	0.26	-1.6
1,961,052	-		AO353_08920	0.26	+0.4
1,961,057	+		AO353_08920	0.27	-0.0
1,961,057	+		AO353_08920	0.27	+1.0
1,961,058	-		AO353_08920	0.27	-1.4
1,961,189	+		AO353_08920	0.36	+1.7
1,961,189	+		AO353_08920	0.36	-0.9
1,961,189	+		AO353_08920	0.36	-0.0
1,961,189	+		AO353_08920	0.36	-0.5
1,961,237	+		AO353_08920	0.40	-0.7
1,961,238	-		AO353_08920	0.40	+0.6
1,961,238	-		AO353_08920	0.40	-0.2
1,961,238	-		AO353_08920	0.40	+0.1
1,961,238	-		AO353_08920	0.40	-0.7
1,961,238	-		AO353_08920	0.40	+1.0
1,961,306	+		AO353_08920	0.45	-1.0
1,961,306	+		AO353_08920	0.45	+0.3
1,961,307	-		AO353_08920	0.45	-0.7
1,961,307	-		AO353_08920	0.45	+0.5
1,961,307	-		AO353_08920	0.45	-0.7
1,961,307	-		AO353_08920	0.45	-2.2
1,961,307	-		AO353_08920	0.45	+3.2
1,961,307	-		AO353_08920	0.45	-0.1
1,961,307	-		AO353_08920	0.45	-1.9
1,961,307	-		AO353_08920	0.45	-0.5
1,961,307	-		AO353_08920	0.45	-0.4
1,961,327	+		AO353_08920	0.46	+0.0
1,961,327	+		AO353_08920	0.46	+0.7
1,961,327	+		AO353_08920	0.46	+0.1
1,961,328	-		AO353_08920	0.46	-0.5
1,961,345	+		AO353_08920	0.47	-0.2
1,961,345	+		AO353_08920	0.47	-1.7
1,961,346	-		AO353_08920	0.47	-1.2