Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08345

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,832,402	+		AO353_08340	0.61	-1.9
1,832,403	-		AO353_08340	0.61	-0.9
1,832,506	+		AO353_08340	0.67	+0.2
1,832,506	+		AO353_08340	0.67	-0.1
1,832,506	+		AO353_08340	0.67	-0.9
1,832,506	+		AO353_08340	0.67	+0.2
1,832,506	+		AO353_08340	0.67	+0.3
1,832,506	+		AO353_08340	0.67	+0.8
1,832,506	+		AO353_08340	0.67	+0.4
1,832,506	+		AO353_08340	0.67	-1.4
1,832,506	+		AO353_08340	0.67	+0.3
1,832,506	+		AO353_08340	0.67	-1.1
1,832,506	+		AO353_08340	0.67	-1.0
1,832,507	-		AO353_08340	0.67	+1.1
1,832,507	-		AO353_08340	0.67	+0.9
1,832,507	-		AO353_08340	0.67	-0.0
1,832,507	-		AO353_08340	0.67	-0.0
1,832,507	-		AO353_08340	0.67	+0.6
1,832,507	-		AO353_08340	0.67	+0.9
1,832,507	-		AO353_08340	0.67	-0.5
1,832,507	-		AO353_08340	0.67	-0.5
1,832,507	-		AO353_08340	0.67	-0.9
1,832,507	-		AO353_08340	0.67	+0.3
1,832,507	-		AO353_08340	0.67	+1.7
1,832,507	-		AO353_08340	0.67	-0.6
1,832,507	-		AO353_08340	0.67	+1.4
1,832,507	-		AO353_08340	0.67	-2.7
1,832,507	-		AO353_08340	0.67	+1.3
1,832,514	+		AO353_08340	0.67	+0.4
1,832,514	+		AO353_08340	0.67	+0.2
1,832,656	+		AO353_08340	0.76	+1.5
1,832,657	-		AO353_08340	0.76	-0.5
1,832,705	-		AO353_08340	0.78	-0.3
1,832,761	+		AO353_08340	0.82	-1.8
1,832,761	+		AO353_08340	0.82	-0.7
1,832,761	+		AO353_08340	0.82	-0.8
1,832,761	+		AO353_08340	0.82	+1.4
1,832,761	+		AO353_08340	0.82	-1.0
1,832,761	+		AO353_08340	0.82	-0.1
1,832,761	+		AO353_08340	0.82	+0.4
1,832,762	-		AO353_08340	0.82	+1.1
1,832,762	-		AO353_08340	0.82	-0.6
1,832,762	-		AO353_08340	0.82	-0.3
1,832,762	-		AO353_08340	0.82	+1.1
1,832,762	-		AO353_08340	0.82	-0.3
1,832,762	-		AO353_08340	0.82	-1.9
1,832,762	-		AO353_08340	0.82	-0.1
1,832,762	-		AO353_08340	0.82	-2.2
1,832,762	-		AO353_08340	0.82	-1.2
1,832,762	-		AO353_08340	0.82	+1.7
1,832,852	+		AO353_08340	0.87	-1.2
1,832,882	+		AO353_08340	0.89	-0.1
1,832,882	+		AO353_08340	0.89	+0.7
1,832,883	-		AO353_08340	0.89	-0.2
1,832,992	+				-1.1
1,832,992	+				-0.1
1,833,007	+				+1.0
1,833,007	+				-0.9
1,833,008	-				-1.9
1,833,008	-				+1.6
1,833,015	+				+0.9
1,833,015	+				+0.5
1,833,015	+				+3.4
1,833,015	+				+0.7
1,833,016	-				+0.9
1,833,046	+				-2.3
1,833,121	+				+1.2
1,833,144	+				+0.3
1,833,145	-				-0.8
1,833,145	-				+0.5
1,833,145	-				-0.5
1,833,145	-				+1.3
1,833,176	+				+0.5
1,833,176	+				-2.5
1,833,177	-				+0.9
1,833,217	+				-1.5
1,833,217	+				-0.4
1,833,218	-				-1.9
1,833,307	+				-1.2
1,833,307	+				-0.3
1,833,307	+				-1.9
1,833,307	+				+0.5
1,833,307	+				+1.0
1,833,307	+				-1.9
1,833,307	+				+1.9
1,833,307	+				+0.3
1,833,307	+				+1.3
1,833,307	+				-0.6
1,833,307	+				-0.4
1,833,307	+				+0.2
1,833,307	+				-0.5
1,833,308	-				+0.7
1,833,308	-				+0.1
1,833,308	-				+0.5
1,833,308	-				-0.7
1,833,308	-				-1.9
1,833,308	-				-1.0
1,833,329	+				+1.4
1,833,329	+				+0.1
1,833,330	-				-2.7
1,833,629	+		AO353_08345	0.15	+1.3
1,833,629	+		AO353_08345	0.15	+1.7
1,833,630	-		AO353_08345	0.15	-1.7
1,833,630	-		AO353_08345	0.15	-1.0
1,833,671	+		AO353_08345	0.17	-0.3
1,833,671	+		AO353_08345	0.17	-0.7
1,833,671	+		AO353_08345	0.17	-1.5
1,833,671	+		AO353_08345	0.17	-2.3
1,833,671	+		AO353_08345	0.17	-1.8
1,833,671	+		AO353_08345	0.17	-0.3
1,833,671	+		AO353_08345	0.17	-0.6
1,833,671	+		AO353_08345	0.17	-2.9
1,833,671	+		AO353_08345	0.17	-0.5
1,833,671	+		AO353_08345	0.17	+1.3
1,833,671	+		AO353_08345	0.17	+1.0
1,833,672	-		AO353_08345	0.17	-0.6
1,833,672	-		AO353_08345	0.17	-1.5
1,833,672	-		AO353_08345	0.17	-0.6
1,833,672	-		AO353_08345	0.17	-1.6
1,833,672	-		AO353_08345	0.17	-2.0
1,833,672	-		AO353_08345	0.17	-2.4
1,833,672	-		AO353_08345	0.17	-1.5
1,833,672	-		AO353_08345	0.17	-0.7
1,833,900	-		AO353_08345	0.30	-0.0
1,834,085	+		AO353_08345	0.40	-0.8
1,834,085	+		AO353_08345	0.40	+0.1
1,834,086	-		AO353_08345	0.40	-0.9
1,834,089	-		AO353_08345	0.40	-0.5
1,834,089	-		AO353_08345	0.40	+1.9
1,834,310	+		AO353_08345	0.52	+0.3
1,834,310	+		AO353_08345	0.52	-1.3
1,834,310	+		AO353_08345	0.52	-0.8
1,834,310	+		AO353_08345	0.52	+0.5
1,834,311	-		AO353_08345	0.52	-0.1
1,834,311	-		AO353_08345	0.52	-1.1
1,834,311	-		AO353_08345	0.52	-0.6
1,834,311	-		AO353_08345	0.52	-1.5
1,834,429	+		AO353_08345	0.58	-0.5
1,834,429	+		AO353_08345	0.58	-2.0
1,834,429	+		AO353_08345	0.58	-1.5
1,834,429	+		AO353_08345	0.58	-0.5
1,834,595	+		AO353_08345	0.67	-1.7
1,834,595	+		AO353_08345	0.67	-1.0
1,834,596	-		AO353_08345	0.67	-0.5
1,834,596	-		AO353_08345	0.67	+0.4
1,834,829	+		AO353_08345	0.80	+1.1
1,834,841	+		AO353_08345	0.81	-0.9
1,834,841	+		AO353_08345	0.81	-0.1
1,834,842	-		AO353_08345	0.81	-0.3
1,834,989	+		AO353_08345	0.89	-1.3
1,834,989	+		AO353_08345	0.89	-0.7
1,834,989	+		AO353_08345	0.89	-1.8
1,834,989	+		AO353_08345	0.89	+0.9
1,834,990	-		AO353_08345	0.89	+0.1
1,834,990	-		AO353_08345	0.89	-0.4
1,835,104	+				+0.3
1,835,104	+				-0.5
1,835,104	+				-1.8
1,835,104	+				-0.9
1,835,104	+				+0.4
1,835,104	+				-2.4
1,835,104	+				-0.5
1,835,104	+				-0.9
1,835,105	-				+0.3
1,835,105	-				-0.6
1,835,105	-				+0.5
1,835,105	-				-1.2
1,835,105	-				+0.3
1,835,105	-				-0.5
1,835,105	-				+0.5
1,835,129	+				-0.1
1,835,129	+				-1.7
1,835,130	-				-1.1
1,835,130	-				-0.3
1,835,166	+				-0.3
1,835,166	+				+0.7
1,835,166	+				-1.5
1,835,166	+				-1.2
1,835,166	+				-1.3
1,835,166	+				+0.3
1,835,166	+				+1.1
1,835,167	-				-2.0
1,835,167	-				-1.8
1,835,167	-				-0.7
1,835,167	-				-0.5
1,835,167	-				+0.1
1,835,167	-				-0.9
1,835,167	-				-1.1
1,835,167	-				-1.0
1,835,167	-				-0.5
1,835,167	-				+0.1
1,835,170	+				-2.2
1,835,170	+				-2.5
1,835,170	+				+0.4
1,835,170	+				-0.2
1,835,170	+				+0.5
1,835,171	-				+0.5
1,835,171	-				+0.9
1,835,171	-				+1.5
1,835,171	-				-0.5
1,835,195	+				-0.1
1,835,195	+				+0.9
1,835,195	+				-1.4
1,835,195	+				-0.9
1,835,196	-				+0.8
1,835,275	+				-1.1
1,835,276	-				-0.6
1,835,276	-				+2.1
1,835,276	-				+0.9
1,835,340	+				-1.1
1,835,341	-				-1.7
1,835,429	-		AO353_08350	0.11	+0.5
1,835,429	-		AO353_08350	0.11	-1.6
1,835,510	-		AO353_08350	0.17	-1.0
1,835,510	-		AO353_08350	0.17	-0.7
1,835,617	+		AO353_08350	0.26	+0.9
1,835,618	-		AO353_08350	0.26	+0.3
1,835,655	+		AO353_08350	0.29	+0.5
1,835,655	+		AO353_08350	0.29	-0.5
1,835,655	+		AO353_08350	0.29	-1.6
1,835,655	+		AO353_08350	0.29	+0.9
1,835,656	-		AO353_08350	0.29	-1.2
1,835,656	-		AO353_08350	0.29	-1.1
1,835,808	+		AO353_08350	0.41	-0.7
1,835,808	+		AO353_08350	0.41	-1.2
1,835,808	+		AO353_08350	0.41	+0.9
1,835,808	+		AO353_08350	0.41	+0.8
1,835,808	+		AO353_08350	0.41	-2.5
1,835,809	-		AO353_08350	0.41	-0.6
1,835,809	-		AO353_08350	0.41	-0.8
1,835,809	-		AO353_08350	0.41	-0.3
1,835,839	+		AO353_08350	0.44	-2.3
1,836,012	+		AO353_08350	0.58	-1.3
1,836,031	-		AO353_08350	0.60	-1.2
1,836,099	+				+1.3
1,836,099	+		AO353_08350	0.65	+0.1
1,836,099	+		AO353_08350	0.65	-1.0
1,836,099	+		AO353_08350	0.65	-1.5
1,836,099	+		AO353_08350	0.65	-1.5
1,836,100	-		AO353_08350	0.65	-3.2
1,836,100	-		AO353_08350	0.65	+0.5
1,836,100	-		AO353_08350	0.65	-2.5
1,836,121	+		AO353_08350	0.67	+0.3
1,836,121	+		AO353_08350	0.67	-0.8
1,836,121	+		AO353_08350	0.67	+1.0
1,836,121	+		AO353_08350	0.67	-0.1
1,836,122	-		AO353_08350	0.67	+0.5
1,836,122	-		AO353_08350	0.67	-0.3
1,836,122	-		AO353_08350	0.67	-1.3
1,836,122	-		AO353_08350	0.67	-2.3
1,836,122	-		AO353_08350	0.67	+0.1
1,836,133	+		AO353_08350	0.68	+0.7
1,836,134	-		AO353_08350	0.68	-1.8
1,836,189	+		AO353_08350	0.72	+0.1
1,836,189	+		AO353_08350	0.72	-0.5