Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08160

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,798,517	+		AO353_08155	0.13	-1.2
1,798,517	+		AO353_08155	0.13	-0.3
1,798,517	+		AO353_08155	0.13	+0.0
1,798,517	+		AO353_08155	0.13	-0.4
1,798,517	+		AO353_08155	0.13	-0.2
1,798,517	+		AO353_08155	0.13	+0.1
1,798,517	+		AO353_08155	0.13	-2.0
1,798,517	+		AO353_08155	0.13	-1.1
1,798,517	+		AO353_08155	0.13	+0.9
1,798,517	+		AO353_08155	0.13	+0.3
1,798,517	+		AO353_08155	0.13	+2.1
1,798,517	+		AO353_08155	0.13	+1.0
1,798,517	+		AO353_08155	0.13	-0.5
1,798,517	+		AO353_08155	0.13	-0.8
1,798,517	+		AO353_08155	0.13	-1.1
1,798,518	-		AO353_08155	0.13	-0.6
1,798,518	-		AO353_08155	0.13	+1.2
1,798,518	-		AO353_08155	0.13	-0.7
1,798,518	-		AO353_08155	0.13	+0.6
1,798,518	-		AO353_08155	0.13	+0.1
1,798,518	-		AO353_08155	0.13	+1.2
1,798,518	-		AO353_08155	0.13	-0.2
1,798,518	-		AO353_08155	0.13	+0.9
1,798,518	-		AO353_08155	0.13	+0.5
1,798,518	-		AO353_08155	0.13	-0.1
1,798,518	-		AO353_08155	0.13	-0.6
1,798,878	+		AO353_08155	0.47	+0.6
1,798,879	-		AO353_08155	0.48	-1.0
1,798,960	-		AO353_08155	0.55	+2.0
1,798,960	-		AO353_08155	0.55	-1.1
1,798,960	-		AO353_08155	0.55	+1.8
1,798,960	-		AO353_08155	0.55	-2.6
1,798,985	+		AO353_08155	0.58	+0.5
1,798,985	+		AO353_08155	0.58	-1.4
1,798,985	+		AO353_08155	0.58	+1.8
1,799,016	+		AO353_08155	0.61	-0.6
1,799,070	+		AO353_08155	0.66	-0.8
1,799,070	+		AO353_08155	0.66	-0.6
1,799,267	+		AO353_08155	0.85	-0.4
1,799,267	+		AO353_08155	0.85	+1.0
1,799,267	+		AO353_08155	0.85	+0.5
1,799,267	+		AO353_08155	0.85	+0.0
1,799,267	+		AO353_08155	0.85	-0.2
1,799,268	-		AO353_08155	0.85	-0.6
1,799,268	-		AO353_08155	0.85	-0.9
1,799,268	-		AO353_08155	0.85	+0.1
1,799,421	+				+0.3
1,799,421	+				+0.3
1,799,421	+				-0.4
1,799,422	-				-1.3
1,799,422	-				-1.6
1,799,422	-				+0.8
1,799,440	+				+0.9
1,799,441	-				-1.2
1,799,441	-				+8.1
1,799,441	-				-2.5
1,799,441	-				-0.9
1,799,488	+				-0.6
1,799,489	-				-1.6
1,799,500	+				-0.3
1,799,500	+				+0.9
1,799,500	+				-0.3
1,799,500	+				+0.1
1,799,500	+				+0.4
1,799,500	+				+0.2
1,799,500	+				+0.2
1,799,500	+				+0.7
1,799,500	+				+0.7
1,799,500	+				+0.9
1,799,501	-				+0.6
1,799,501	-				-0.5
1,799,501	-				+0.7
1,799,501	-				-0.3
1,799,501	-				+0.9
1,799,509	+				+0.2
1,799,509	+				-2.0
1,799,509	+				-2.4
1,799,510	-				-0.7
1,799,510	-				+0.6
1,799,510	-				-1.6
1,799,510	-				-1.0
1,799,510	-				-0.6
1,799,510	-				-1.1
1,799,520	-				-0.3
1,799,616	+		AO353_08160	0.20	-1.7
1,799,616	+		AO353_08160	0.20	-0.4
1,799,616	+		AO353_08160	0.20	+0.9
1,799,616	+		AO353_08160	0.20	-0.8
1,799,617	-		AO353_08160	0.20	-1.6
1,799,617	-		AO353_08160	0.20	-1.1
1,799,617	-		AO353_08160	0.20	-0.8
1,799,617	-		AO353_08160	0.20	-0.9
1,799,649	+		AO353_08160	0.24	-2.5
1,799,649	+		AO353_08160	0.24	-1.4
1,799,649	+		AO353_08160	0.24	-1.0
1,799,649	+		AO353_08160	0.24	-0.2
1,799,649	+		AO353_08160	0.24	-0.3
1,799,649	+		AO353_08160	0.24	-2.6
1,799,649	+		AO353_08160	0.24	+1.0
1,799,649	+		AO353_08160	0.24	+0.4
1,799,649	+		AO353_08160	0.24	+0.4
1,799,650	-		AO353_08160	0.25	-1.1
1,799,650	-		AO353_08160	0.25	-1.9
1,799,650	-		AO353_08160	0.25	-1.7
1,799,650	-		AO353_08160	0.25	-0.6
1,799,650	-		AO353_08160	0.25	-2.0
1,799,650	-		AO353_08160	0.25	-2.3
1,799,650	-		AO353_08160	0.25	+0.5
1,799,650	-		AO353_08160	0.25	+0.1
1,799,650	-		AO353_08160	0.25	-1.2
1,799,745	-		AO353_08160	0.38	+0.2
1,799,876	+		AO353_08160	0.57	-1.1
1,799,876	+		AO353_08160	0.57	+0.0
1,799,877	-		AO353_08160	0.57	-1.1
1,799,877	-		AO353_08160	0.57	-2.4
1,799,921	+		AO353_08160	0.63	-1.7
1,800,016	+		AO353_08160	0.77	-0.8
1,800,016	+		AO353_08160	0.77	+0.4
1,800,016	+		AO353_08160	0.77	+1.8
1,800,016	+		AO353_08160	0.77	+1.8
1,800,016	+		AO353_08160	0.77	-0.8
1,800,016	+		AO353_08160	0.77	-1.5
1,800,017	-		AO353_08160	0.77	-0.2
1,800,163	-				-0.3
1,800,188	+				-0.5
1,800,188	+				-1.5
1,800,188	+				+2.8
1,800,188	+				-0.6
1,800,188	+				-0.6
1,800,188	+				+0.4
1,800,188	+				-0.8
1,800,188	+				+0.4
1,800,188	+				+0.1
1,800,188	+				+1.0
1,800,188	+				+1.0
1,800,189	-				+1.1
1,800,189	-				-2.9
1,800,189	-				-1.4
1,800,189	-				-1.5
1,800,189	-				-1.0
1,800,189	-				-1.9
1,800,189	-				-1.0
1,800,189	-				-0.6
1,800,189	-				-2.6
1,800,189	-				-1.5
1,800,189	-				+0.0
1,800,196	+				+1.4
1,800,196	+				+1.5
1,800,196	+				+0.6
1,800,196	+				+0.2
1,800,196	+				-1.6
1,800,196	+				+0.3
1,800,196	+				-1.2
1,800,196	+				-1.0
1,800,196	+				-0.8
1,800,196	+				-0.7
1,800,196	+				-0.5
1,800,196	+				+2.2
1,800,197	-				-0.3
1,800,197	-				-0.3
1,800,197	-				-1.7
1,800,197	-				-0.3
1,800,197	-				-0.6
1,800,197	-				+0.2
1,800,197	-				-0.6
1,800,197	-				-0.3
1,800,197	-				-0.9
1,800,199	-				+1.2
1,800,199	-				-1.0
1,800,199	-				+0.8
1,800,606	+		AO353_08165	0.48	+0.8
1,800,741	+		AO353_08165	0.65	+0.0
1,800,741	+		AO353_08165	0.65	+0.5
1,800,741	+		AO353_08165	0.65	+0.4
1,800,741	+		AO353_08165	0.65	-0.8
1,800,741	+		AO353_08165	0.65	+0.5
1,800,741	+		AO353_08165	0.65	-1.3
1,800,742	-		AO353_08165	0.65	+0.0
1,800,883	+		AO353_08165	0.82	+3.8
1,800,883	+		AO353_08165	0.82	+1.6
1,800,883	+		AO353_08165	0.82	-0.2
1,800,884	-		AO353_08165	0.82	-0.2
1,801,037	+				+1.4
1,801,037	+				-0.3
1,801,037	+				+1.2
1,801,037	+				+0.2
1,801,037	+				+0.2
1,801,037	+				+0.0
1,801,037	+				-0.5
1,801,037	+				-1.8
1,801,037	+				-0.2
1,801,037	+				-2.0
1,801,037	+				-0.5
1,801,037	+				+1.2
1,801,037	+				+2.3
1,801,037	+				+0.5
1,801,038	-				-0.5
1,801,038	-				-0.0
1,801,038	-				-1.9
1,801,038	-				-0.9
1,801,051	+				+0.8
1,801,052	-				-0.3
1,801,107	+				-0.6
1,801,108	-				+0.3
1,801,133	+		AO353_08170	0.14	+0.0
1,801,134	-		AO353_08170	0.14	-1.6
1,801,161	+		AO353_08170	0.18	-1.9
1,801,162	-		AO353_08170	0.19	-2.5
1,801,162	-		AO353_08170	0.19	-1.6