Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08085

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,779,994	+		AO353_08075	0.36	-0.4
1,779,994	+		AO353_08075	0.36	-0.3
1,779,995	-		AO353_08075	0.36	+1.2
1,779,995	-		AO353_08075	0.36	+0.4
1,779,995	-		AO353_08075	0.36	-0.4
1,779,995	-		AO353_08075	0.36	+0.4
1,780,132	+		AO353_08075	0.58	-0.3
1,780,132	+		AO353_08075	0.58	-1.1
1,780,133	-		AO353_08075	0.59	+0.1
1,780,133	-		AO353_08075	0.59	+1.3
1,780,133	-		AO353_08075	0.59	-0.5
1,780,133	-		AO353_08075	0.59	-0.9
1,780,153	+		AO353_08075	0.62	-0.7
1,780,153	+		AO353_08075	0.62	-1.1
1,780,153	+		AO353_08075	0.62	+0.7
1,780,154	-		AO353_08075	0.62	-2.2
1,780,154	-		AO353_08075	0.62	-0.5
1,780,154	-		AO353_08075	0.62	-1.2
1,780,154	-		AO353_08075	0.62	+0.6
1,780,154	-		AO353_08075	0.62	-0.0
1,780,213	+		AO353_08075	0.72	-0.2
1,780,213	+		AO353_08075	0.72	+0.8
1,780,214	-		AO353_08075	0.72	+0.2
1,780,214	-		AO353_08075	0.72	+0.6
1,780,231	+		AO353_08075	0.74	+0.2
1,780,231	+		AO353_08075	0.74	+0.8
1,780,231	+		AO353_08075	0.74	+0.7
1,780,232	-		AO353_08075	0.75	-2.3
1,780,232	-		AO353_08075	0.75	-2.9
1,780,232	-		AO353_08075	0.75	-1.5
1,780,232	-		AO353_08075	0.75	+0.7
1,780,232	-		AO353_08075	0.75	-0.4
1,780,232	-		AO353_08075	0.75	+0.4
1,780,232	-		AO353_08075	0.75	+0.8
1,780,232	-		AO353_08075	0.75	+0.6
1,780,247	+		AO353_08075	0.77	-0.5
1,780,247	+		AO353_08075	0.77	-0.6
1,780,248	-		AO353_08075	0.77	+0.3
1,780,256	-		AO353_08075	0.78	+1.2
1,780,384	+				-1.2
1,780,384	+				-1.3
1,780,384	+				-1.1
1,780,384	+				+0.2
1,780,384	+				-2.0
1,780,384	+				-1.3
1,780,384	+				+0.9
1,780,384	+				+0.2
1,780,384	+				-0.4
1,780,384	+				-0.2
1,780,384	+				+0.2
1,780,385	-				+0.0
1,780,385	-				-0.2
1,780,385	-				-0.4
1,780,385	-				-0.0
1,780,385	-				-2.5
1,780,385	-				+1.9
1,780,385	-				+0.7
1,780,385	-				-0.3
1,780,385	-				-0.1
1,780,385	-				+0.1
1,780,416	+				-1.9
1,780,416	+				+0.3
1,780,416	+				-0.6
1,780,416	+				+0.4
1,780,416	+				+0.2
1,780,416	+				-0.3
1,780,416	+				-1.1
1,780,416	+				-0.7
1,780,417	-				-1.3
1,780,417	-				-0.7
1,780,417	-				-1.0
1,780,417	-				-0.0
1,780,417	-				-3.0
1,780,417	-				-0.8
1,780,417	-				-0.8
1,780,417	-				-0.2
1,780,440	+				+0.5
1,780,441	-				-0.2
1,780,441	-				+1.2
1,780,480	+				-1.0
1,780,480	+				+0.9
1,780,503	+				+0.5
1,780,503	+				+0.1
1,780,504	-				+0.5
1,780,504	-				+0.6
1,780,504	-				-0.7
1,780,504	-				-1.7
1,780,655	+		AO353_08080	0.27	+0.4
1,780,655	+		AO353_08080	0.27	-0.1
1,780,655	+		AO353_08080	0.27	-0.8
1,780,655	+		AO353_08080	0.27	-1.1
1,780,655	+		AO353_08080	0.27	-1.5
1,780,655	+		AO353_08080	0.27	-0.4
1,780,655	+		AO353_08080	0.27	+1.5
1,780,656	-		AO353_08080	0.27	-0.1
1,780,656	-		AO353_08080	0.27	-2.2
1,780,656	-		AO353_08080	0.27	-0.9
1,780,656	-		AO353_08080	0.27	+0.6
1,780,656	-		AO353_08080	0.27	-3.2
1,780,656	-		AO353_08080	0.27	-0.7
1,780,656	-		AO353_08080	0.27	-2.5
1,780,656	-		AO353_08080	0.27	-1.2
1,780,656	-		AO353_08080	0.27	-0.7
1,780,679	+		AO353_08080	0.32	+0.8
1,780,679	+		AO353_08080	0.32	-0.3
1,780,679	+		AO353_08080	0.32	-1.6
1,780,679	+		AO353_08080	0.32	-0.2
1,780,679	+		AO353_08080	0.32	+0.5
1,780,679	+		AO353_08080	0.32	-2.1
1,780,680	-		AO353_08080	0.32	+0.2
1,780,680	-		AO353_08080	0.32	-0.7
1,780,680	-		AO353_08080	0.32	-1.2
1,780,680	-		AO353_08080	0.32	-0.4
1,780,680	-		AO353_08080	0.32	-0.8
1,780,680	-		AO353_08080	0.32	+0.8
1,780,854	-		AO353_08080	0.70	-2.3
1,780,892	+		AO353_08080	0.78	-0.5
1,780,893	-		AO353_08080	0.78	-1.5
1,781,006	+				-1.3
1,781,006	+				+0.1
1,781,007	-				-2.2
1,781,007	-				-0.2
1,781,027	+				-1.1
1,781,028	-				+0.4
1,781,055	+				+0.2
1,781,056	-				+0.8
1,781,673	+		AO353_08085	0.12	+0.7
1,781,674	-		AO353_08085	0.12	+0.5
1,781,674	-		AO353_08085	0.12	-1.1
1,781,685	+		AO353_08085	0.12	-1.7
1,781,685	+		AO353_08085	0.12	-0.5
1,781,685	+		AO353_08085	0.12	+0.1
1,781,686	-		AO353_08085	0.12	-0.2
1,781,686	-		AO353_08085	0.12	-2.0
1,781,700	+		AO353_08085	0.12	-2.5
1,781,700	+		AO353_08085	0.12	-0.4
1,781,701	-		AO353_08085	0.12	+0.2
1,781,706	+		AO353_08085	0.12	-1.2
1,781,706	+		AO353_08085	0.12	+1.6
1,781,706	+		AO353_08085	0.12	+1.2
1,781,706	+		AO353_08085	0.12	-1.0
1,781,707	-		AO353_08085	0.12	-0.9
1,781,707	-		AO353_08085	0.12	-1.8
1,781,707	-		AO353_08085	0.12	-1.0
1,781,707	-		AO353_08085	0.12	-0.2
1,781,707	-		AO353_08085	0.12	-1.9
1,781,707	-		AO353_08085	0.12	-1.1
1,781,708	+		AO353_08085	0.12	-0.0
1,781,708	+		AO353_08085	0.12	-1.0
1,781,708	+		AO353_08085	0.12	-1.5
1,781,708	+		AO353_08085	0.12	-0.0
1,781,709	-		AO353_08085	0.12	-1.1
1,781,709	-		AO353_08085	0.12	-2.3
1,781,709	-		AO353_08085	0.12	-2.1
1,781,709	-		AO353_08085	0.12	-1.5
1,781,727	+		AO353_08085	0.12	-1.0
1,781,728	-		AO353_08085	0.13	-1.8
1,781,728	-		AO353_08085	0.13	+0.5
1,781,728	-		AO353_08085	0.13	-2.1
1,781,731	-		AO353_08085	0.13	-0.9
1,781,793	+		AO353_08085	0.14	-3.2
1,781,794	-		AO353_08085	0.14	-1.5
1,782,386	+		AO353_08085	0.24	-1.5
1,782,387	-		AO353_08085	0.24	-1.3
1,782,490	+		AO353_08085	0.25	-0.4
1,782,808	+		AO353_08085	0.31	-0.3
1,783,068	+		AO353_08085	0.35	+0.5
1,783,322	-		AO353_08085	0.39	-3.5
1,783,495	-		AO353_08085	0.42	-0.4
1,783,495	-		AO353_08085	0.42	-0.9
1,783,761	-		AO353_08085	0.47	-0.8
1,783,983	+		AO353_08085	0.50	-0.7
1,784,400	+		AO353_08085	0.57	-1.1
1,784,400	+		AO353_08085	0.57	-0.7
1,784,400	+		AO353_08085	0.57	-1.9
1,784,401	-		AO353_08085	0.57	-0.0
1,784,781	+		AO353_08085	0.64	-1.3
1,784,782	-		AO353_08085	0.64	+2.5
1,784,782	-		AO353_08085	0.64	-2.4
1,784,967	+		AO353_08085	0.67	-2.4
1,784,967	+		AO353_08085	0.67	+0.2
1,784,967	+		AO353_08085	0.67	-1.8
1,784,968	-		AO353_08085	0.67	-0.5
1,784,968	-		AO353_08085	0.67	-1.1
1,784,968	-		AO353_08085	0.67	+0.5
1,784,968	-		AO353_08085	0.67	-0.8
1,785,246	+		AO353_08085	0.72	-0.7
1,785,247	-		AO353_08085	0.72	-1.1
1,785,330	+		AO353_08085	0.73	-1.3
1,785,330	+		AO353_08085	0.73	-2.5
1,785,330	+		AO353_08085	0.73	-2.2
1,785,330	+		AO353_08085	0.73	-0.5
1,785,331	-		AO353_08085	0.73	-0.7
1,785,333	+		AO353_08085	0.73	-0.0
1,785,333	+		AO353_08085	0.73	-2.1
1,785,334	-		AO353_08085	0.73	-1.8
1,785,334	-		AO353_08085	0.73	-0.2
1,785,334	-		AO353_08085	0.73	-0.9
1,785,334	-		AO353_08085	0.73	-0.2
1,785,334	-		AO353_08085	0.73	-3.0
1,785,347	-		AO353_08085	0.73	+0.1
1,785,419	-		AO353_08085	0.75	-1.3
1,785,419	-		AO353_08085	0.75	+1.6
1,785,546	+		AO353_08085	0.77	-2.7
1,785,546	+		AO353_08085	0.77	+0.2
1,785,546	+		AO353_08085	0.77	-0.9
1,785,546	+		AO353_08085	0.77	-0.5
1,785,547	-		AO353_08085	0.77	-1.1
1,785,547	-		AO353_08085	0.77	+0.8
1,785,547	-		AO353_08085	0.77	-1.9
1,785,547	-		AO353_08085	0.77	-0.5
1,785,547	-		AO353_08085	0.77	-1.4
1,785,699	+		AO353_08085	0.79	-0.7
1,785,699	+		AO353_08085	0.79	-0.9
1,785,700	-		AO353_08085	0.79	-0.4
1,785,700	-		AO353_08085	0.79	-0.5
1,786,047	+		AO353_08085	0.85	-0.4
1,786,047	+		AO353_08085	0.85	-0.5
1,786,101	+		AO353_08085	0.86	-2.3
1,786,101	+		AO353_08085	0.86	-1.7
1,786,101	+		AO353_08085	0.86	+0.2
1,786,101	+		AO353_08085	0.86	-1.2
1,786,101	+		AO353_08085	0.86	-2.4
1,786,101	+		AO353_08085	0.86	-1.2
1,786,101	+		AO353_08085	0.86	-1.0
1,786,101	+		AO353_08085	0.86	+0.3
1,786,101	+		AO353_08085	0.86	-1.4
1,786,101	+		AO353_08085	0.86	-2.0
1,786,101	+		AO353_08085	0.86	-1.0
1,786,102	-		AO353_08085	0.86	+0.3
1,786,102	-		AO353_08085	0.86	-0.2
1,786,102	-		AO353_08085	0.86	-1.1
1,786,102	-		AO353_08085	0.86	+0.5
1,786,102	-		AO353_08085	0.86	-2.7
1,786,102	-		AO353_08085	0.86	-0.8
1,786,102	-		AO353_08085	0.86	-1.0
1,786,338	+				-0.8
1,786,609	-				+1.8
1,786,731	+				+0.1
1,786,853	-				-0.5
1,786,853	-				+0.8
1,786,908	+				-0.2
1,786,908	+				-1.1
1,786,908	+				-0.4
1,786,908	+				+0.8
1,786,908	+				-0.8
1,786,908	+				+1.8
1,786,908	+				+0.5
1,786,908	+				-0.5
1,786,908	+				-1.6
1,786,908	+				-0.4
1,786,908	+				+0.5
1,786,908	+				-0.5
1,786,908	+				-1.9
1,786,908	+				-1.0
1,786,909	-				-0.0
1,786,909	-				-0.9
1,786,909	-				-1.4
1,786,909	-				-0.9
1,786,909	-				+0.2
1,786,909	-				+0.5
1,786,909	-				-0.0
1,786,909	-				-0.5
1,786,909	-				+1.1
1,786,909	-				-1.1
1,786,909	-				-1.7
1,787,134	+				+1.2
1,787,135	-				+0.4
1,787,135	-				+0.3
1,787,135	-				-0.8
1,787,178	+		AO353_08090	0.10	-1.8
1,787,178	+		AO353_08090	0.10	-2.3
1,787,178	+		AO353_08090	0.10	+0.2
1,787,178	+		AO353_08090	0.10	-0.0
1,787,179	-		AO353_08090	0.10	-0.0
1,787,179	-		AO353_08090	0.10	+1.2
1,787,179	-		AO353_08090	0.10	-0.2
1,787,179	-		AO353_08090	0.10	+1.8
1,787,466	+		AO353_08090	0.24	-1.1
1,787,467	-		AO353_08090	0.24	-0.2
1,787,467	-		AO353_08090	0.24	+0.9
1,787,864	+		AO353_08090	0.44	-0.1
1,787,865	-		AO353_08090	0.44	+1.1