Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05370

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,180,347	+				-0.4
1,180,347	+				-1.4
1,180,347	+				-0.4
1,180,347	+				-0.2
1,180,347	+				+1.6
1,180,364	+				-2.2
1,180,364	+				-1.7
1,180,364	+				-1.0
1,180,364	+				+0.6
1,180,364	+				-2.5
1,180,364	+				-1.6
1,180,364	+				+1.0
1,180,365	-				+0.3
1,180,365	-				-1.2
1,180,365	-				+2.2
1,180,365	-				+1.6
1,180,449	+				-1.3
1,180,450	-				-1.3
1,180,450	-				-0.2
1,180,450	-				+0.6
1,180,450	-				+0.7
1,180,490	+				-1.8
1,180,490	+				-1.8
1,180,490	+				-1.2
1,180,490	+				-0.0
1,180,491	-				-0.5
1,180,491	-				-2.2
1,180,526	+				+1.0
1,180,526	+				+2.3
1,180,526	+				-0.8
1,180,526	+				-1.1
1,180,526	+				-0.2
1,180,526	+				+1.7
1,180,526	+				-0.4
1,180,526	+				+0.6
1,180,526	+				+1.6
1,180,526	+				-0.4
1,180,526	+				+0.1
1,180,526	+				-2.1
1,180,526	+				+1.8
1,180,526	+				+1.2
1,180,527	-				-1.7
1,180,527	-				+1.0
1,180,527	-				-1.2
1,180,527	-				-0.2
1,180,551	+				-0.4
1,180,551	+				+1.0
1,180,552	-				+1.3
1,180,552	-				+0.5
1,180,552	-				+0.7
1,180,689	+				+2.9
1,180,713	+				-0.0
1,180,713	+				-0.5
1,180,713	+				-0.8
1,180,713	+				-2.0
1,180,713	+				+0.3
1,180,714	-				+0.3
1,180,714	-				-0.7
1,180,714	-				+0.6
1,180,714	-				-1.2
1,180,714	-				-0.5
1,180,762	+				-0.0
1,180,762	+				-1.1
1,180,762	+				+1.2
1,180,762	+				+1.1
1,180,762	+				+0.3
1,180,762	+				-1.0
1,180,763	-				-2.5
1,180,797	+				-0.4
1,180,798	-				-0.0
1,180,825	-				-0.4
1,180,825	-				-0.6
1,180,870	+				+0.1
1,180,870	+				-0.0
1,180,870	+				+0.8
1,180,870	+				-0.0
1,180,870	+				+0.6
1,180,870	+				-0.6
1,180,871	-				+0.8
1,180,871	-				-0.4
1,180,871	-				-0.2
1,180,952	+				-0.4
1,180,953	-				-0.4
1,180,994	+				-0.6
1,180,994	+				-1.1
1,180,994	+				-0.2
1,180,994	+				+0.3
1,180,995	-				-1.5
1,181,126	+		AO353_05370	0.16	+2.3
1,181,126	+		AO353_05370	0.16	-1.9
1,181,126	+		AO353_05370	0.16	-0.7
1,181,126	+		AO353_05370	0.16	+0.8
1,181,126	+		AO353_05370	0.16	+0.4
1,181,127	-		AO353_05370	0.16	-1.2
1,181,127	-		AO353_05370	0.16	-0.4
1,181,161	+		AO353_05370	0.18	+1.0
1,181,161	+		AO353_05370	0.18	+0.2
1,181,162	-		AO353_05370	0.19	-2.1
1,181,171	+		AO353_05370	0.19	+0.4
1,181,171	+		AO353_05370	0.19	-0.9
1,181,171	+		AO353_05370	0.19	-1.1
1,181,172	-		AO353_05370	0.19	-0.7
1,181,262	-		AO353_05370	0.25	-2.1
1,181,279	+		AO353_05370	0.26	-1.9
1,181,279	+		AO353_05370	0.26	-1.4
1,181,279	+		AO353_05370	0.26	-0.7
1,181,280	-		AO353_05370	0.26	+0.4
1,181,280	-		AO353_05370	0.26	+0.3
1,181,280	-		AO353_05370	0.26	+0.6
1,181,280	-		AO353_05370	0.26	-0.0
1,181,280	-		AO353_05370	0.26	-0.6
1,181,338	+		AO353_05370	0.30	-0.2
1,181,339	-		AO353_05370	0.30	+1.0
1,181,339	-		AO353_05370	0.30	+0.3
1,181,339	-		AO353_05370	0.30	-1.5
1,181,339	-		AO353_05370	0.30	+0.3
1,181,339	-		AO353_05370	0.30	-1.4
1,181,339	-		AO353_05370	0.30	-0.7
1,181,339	-		AO353_05370	0.30	+1.2
1,181,423	+		AO353_05370	0.35	+1.0
1,181,508	-		AO353_05370	0.40	+0.3
1,181,747	+		AO353_05370	0.55	-1.0
1,181,747	+		AO353_05370	0.55	-0.9
1,181,748	-		AO353_05370	0.55	+0.3
1,181,748	-		AO353_05370	0.55	+0.6
1,181,754	+		AO353_05370	0.55	-1.9
1,181,754	+		AO353_05370	0.55	-0.7
1,181,755	-		AO353_05370	0.56	+0.6
1,181,755	-		AO353_05370	0.56	+1.3
1,181,755	-		AO353_05370	0.56	-1.0
1,181,755	-		AO353_05370	0.56	-0.6
1,181,755	-		AO353_05370	0.56	+0.4
1,181,838	-		AO353_05370	0.61	-0.0
1,181,891	+		AO353_05370	0.64	-0.7
1,181,891	+		AO353_05370	0.64	-0.0
1,181,891	+		AO353_05370	0.64	+1.6
1,181,892	-		AO353_05370	0.64	-0.9
1,181,892	-		AO353_05370	0.64	-0.2
1,181,892	-		AO353_05370	0.64	+0.3
1,181,918	+		AO353_05370	0.66	-0.2
1,181,918	+		AO353_05370	0.66	-0.2
1,181,946	+		AO353_05370	0.67	+0.3
1,181,947	-		AO353_05370	0.68	+0.2
1,181,947	-		AO353_05370	0.68	+0.3
1,182,092	+		AO353_05370	0.77	-0.9
1,182,092	+		AO353_05370	0.77	+1.1
1,182,092	+		AO353_05370	0.77	+0.2
1,182,092	+		AO353_05370	0.77	-0.6
1,182,092	+		AO353_05370	0.77	-0.1
1,182,092	+		AO353_05370	0.77	-0.2
1,182,092	+		AO353_05370	0.77	-1.7
1,182,092	+		AO353_05370	0.77	-2.1
1,182,092	+		AO353_05370	0.77	+0.8
1,182,092	+		AO353_05370	0.77	-1.2
1,182,092	+		AO353_05370	0.77	-1.1
1,182,092	+		AO353_05370	0.77	-0.9
1,182,092	+		AO353_05370	0.77	-1.2
1,182,092	+		AO353_05370	0.77	-2.1
1,182,093	-		AO353_05370	0.77	-0.3
1,182,093	-		AO353_05370	0.77	-0.7
1,182,093	-		AO353_05370	0.77	-1.3
1,182,093	-		AO353_05370	0.77	-0.9
1,182,093	-		AO353_05370	0.77	-0.0
1,182,093	-		AO353_05370	0.77	+1.8
1,182,093	-		AO353_05370	0.77	-0.7
1,182,093	-		AO353_05370	0.77	+1.6
1,182,093	-		AO353_05370	0.77	-0.6
1,182,093	-		AO353_05370	0.77	-1.4
1,182,107	+		AO353_05370	0.78	-0.7
1,182,107	+		AO353_05370	0.78	+2.6
1,182,107	+		AO353_05370	0.78	-0.7
1,182,107	+		AO353_05370	0.78	-1.1
1,182,107	+		AO353_05370	0.78	-1.7
1,182,107	+		AO353_05370	0.78	+1.2
1,182,108	-		AO353_05370	0.78	-1.1
1,182,108	-		AO353_05370	0.78	+0.5
1,182,108	-		AO353_05370	0.78	+1.0
1,182,108	-		AO353_05370	0.78	-0.1
1,182,149	+		AO353_05370	0.80	-0.6
1,182,150	-		AO353_05370	0.80	-0.6
1,182,150	-		AO353_05370	0.80	-0.7
1,182,150	-		AO353_05370	0.80	-1.4
1,182,150	-		AO353_05370	0.80	+0.2
1,182,150	-		AO353_05370	0.80	-2.4
1,182,200	+		AO353_05370	0.83	+0.4
1,182,200	+		AO353_05370	0.83	-1.1
1,182,200	+		AO353_05370	0.83	-0.1
1,182,201	-		AO353_05370	0.83	+2.0
1,182,201	-		AO353_05370	0.83	+1.0
1,182,201	-		AO353_05370	0.83	+0.6
1,182,217	-		AO353_05370	0.84	+0.7
1,182,217	-		AO353_05370	0.84	-0.3
1,182,223	+		AO353_05370	0.85	-0.0
1,182,223	+		AO353_05370	0.85	+0.3
1,182,223	+		AO353_05370	0.85	+0.5
1,182,224	-		AO353_05370	0.85	+0.3
1,182,224	-		AO353_05370	0.85	-0.5
1,182,230	+		AO353_05370	0.85	-0.0
1,182,230	+		AO353_05370	0.85	-0.4
1,182,230	+		AO353_05370	0.85	+2.6
1,182,230	+		AO353_05370	0.85	+0.7
1,182,231	-		AO353_05370	0.85	-0.1
1,182,231	-		AO353_05370	0.85	-1.7
1,182,231	-		AO353_05370	0.85	-0.0
1,182,231	-		AO353_05370	0.85	+1.0
1,182,231	-		AO353_05370	0.85	-0.3
1,182,231	-		AO353_05370	0.85	-0.2
1,182,254	+		AO353_05370	0.87	-2.0
1,182,254	+		AO353_05370	0.87	-0.3
1,182,315	-				-0.7
1,182,315	-				-0.0
1,182,315	-				+0.4
1,182,352	+				-1.2
1,182,443	+				-0.4
1,182,443	+				-1.0
1,182,443	+				-1.7
1,182,443	+				-0.3
1,182,443	+				+0.5
1,182,444	-				-1.4
1,182,444	-				-0.1
1,182,444	-				-2.3
1,182,454	+				-0.4
1,182,454	+				+0.1
1,182,455	-				-1.6
1,182,455	-				+1.0
1,182,455	-				-0.7
1,182,456	+				+1.6
1,182,456	+				-1.8
1,182,456	+				-0.6
1,182,456	+				-0.4
1,182,456	+				-1.1
1,182,456	+				-0.9
1,182,456	+				+0.4
1,182,456	+				-1.2
1,182,456	+				+0.3
1,182,456	+				-0.4
1,182,456	+				-1.5
1,182,457	-				-0.6
1,182,457	-				-1.6
1,182,457	-				-2.7
1,182,457	-				-1.1
1,182,457	-				-0.1
1,182,457	-				-0.6
1,182,457	-				-0.9
1,182,457	-				+1.0
1,182,457	-				+0.9
1,182,457	-				+0.6
1,182,457	-				-2.3
1,182,457	-				+1.3
1,182,457	-				+1.0
1,182,457	-				-0.7
1,182,457	-				+0.8
1,182,457	-				-0.7
1,182,460	+				-0.0
1,182,460	+				+1.4
1,182,460	+				-0.2
1,182,460	+				-0.8
1,182,460	+				+1.6
1,182,460	+				-0.5
1,182,460	+				-0.4
1,182,460	+				-0.7
1,182,460	+				-1.8
1,182,460	+				+0.8
1,182,460	+				-0.2
1,182,460	+				-0.4
1,182,460	+				-0.4
1,182,461	-				-1.8
1,182,461	-				+1.6
1,182,461	-				+0.5
1,182,461	-				-1.3
1,182,461	-				+0.2
1,182,461	-				-1.2
1,182,461	-				-0.6
1,182,461	-				+0.6
1,182,461	-				+0.6
1,182,461	-				+1.3
1,182,461	-				+0.6
1,182,461	-				+1.8
1,182,461	-				-1.2
1,182,461	-				-1.5
1,182,461	-				-0.3
1,182,461	-				-1.7
1,182,461	-				+1.0
1,182,461	-				+0.2
1,182,461	-				+1.3
1,182,461	-				+1.1
1,182,461	-				-1.0
1,182,461	-				-0.4
1,182,461	-				+0.4
1,182,461	-				-3.0
1,182,461	-				-0.5
1,182,461	-				-0.2
1,182,461	-				+2.0
1,182,461	-				-1.1
1,182,461	-				+1.2
1,182,464	+				-0.6
1,182,464	+				+0.3
1,182,464	+				-0.0
1,182,464	+				-1.5
1,182,465	-				-0.5
1,182,465	-				+0.1
1,182,465	-				+0.9
1,182,537	+				+0.2
1,182,538	-				-0.2
1,182,538	-				+0.5
1,182,571	+				-0.9
1,182,571	+				-0.9
1,182,572	-				+1.9
1,182,572	-				-0.2
1,182,575	+				-0.4
1,182,575	+				+0.4
1,182,575	+				-0.9
1,182,575	+				+0.6
1,182,575	+				+1.8
1,182,575	+				+2.0
1,182,575	+				-0.0
1,182,575	+				-1.0
1,182,575	+				-0.8
1,182,576	-				-1.7
1,182,576	-				+0.4
1,182,576	-				+1.3
1,182,576	-				+0.9
1,182,576	-				-2.0
1,182,576	-				-0.3
1,182,576	-				+0.6
1,182,576	-				+0.3
1,182,576	-				-0.9
1,182,586	+				-1.6
1,182,586	+				-0.9
1,182,586	+				-0.4
1,182,586	+				+1.0
1,182,587	-				-2.0
1,182,587	-				-1.7
1,182,590	+				-0.2
1,182,591	-				+0.8
1,182,591	-				+0.4
1,182,617	+				-0.9
1,182,617	+				+0.7
1,182,617	+				-2.0
1,182,617	+				-0.4
1,182,617	+				+1.6
1,182,617	+				+1.8
1,182,617	+				+0.1
1,182,617	+				+0.9
1,182,618	-				+1.0
1,182,642	+				-0.6
1,182,656	-				+0.4
1,182,656	-				-0.1
1,182,656	-				-0.0
1,182,656	-				-1.6
1,182,656	-				-0.2
1,182,656	-				+0.3
1,182,656	-				-0.4
1,182,656	-				+1.0
1,182,656	-				+1.2
1,182,656	-				+0.2
1,182,656	-				-1.7
1,182,656	-				-1.1
1,182,656	-				+0.8
1,182,656	-				-0.2
1,182,656	-				-0.6
1,182,656	-				-0.7
1,182,656	-				+0.1
1,182,690	+				-1.1
1,182,690	+				-0.6
1,182,690	+				-2.1
1,182,691	-				-0.6
1,182,730	+				-0.5
1,182,730	+				+0.8
1,182,730	+				-0.0
1,182,730	+				-1.6
1,182,731	-				+1.3
1,182,731	-				-2.3
1,182,731	-				-1.3
1,182,731	-				-2.0
1,182,731	-				+0.5
1,182,731	-				-0.4
1,182,731	-				+1.1
1,182,753	+				-0.7
1,182,753	+				-2.7
1,182,754	-				+0.4
1,182,768	+				+0.1
1,182,768	+				-0.1
1,182,769	-				+1.6
1,182,769	-				+0.4
1,182,769	-				-1.1
1,182,769	-				-1.1
1,182,769	-				-1.1
1,182,769	-				+0.6
1,182,769	-				+1.6
1,182,769	-				-1.1
1,182,771	+				+1.0
1,182,771	+				-0.6
1,182,771	+				-0.7
1,182,771	+				+0.4
1,182,772	-				+0.8
1,182,772	-				-1.0
1,182,772	-				-0.4
1,182,772	-				-0.4
1,182,772	-				-0.2
1,182,772	-				+0.3
1,182,772	-				+0.0
1,182,772	-				-0.9
1,182,772	-				+2.1
1,182,772	-				+1.3
1,182,775	+				+1.4
1,182,775	+				-0.2
1,182,776	-				-0.1
1,182,854	+				+1.0
1,182,854	+				-1.1
1,182,854	+				+0.3
1,182,854	+				+0.3
1,182,854	+				+0.1
1,182,855	-				-0.7
1,182,855	-				+0.8
1,182,855	-				+1.2
1,182,986	+		AO353_05375	0.16	+2.0
1,182,986	+		AO353_05375	0.16	-0.9
1,182,986	+		AO353_05375	0.16	+0.7
1,182,986	+		AO353_05375	0.16	+0.9
1,182,986	+		AO353_05375	0.16	-0.5
1,182,987	-		AO353_05375	0.16	+1.3
1,182,987	-		AO353_05375	0.16	+0.6
1,182,987	-		AO353_05375	0.16	-0.2
1,182,987	-		AO353_05375	0.16	-1.0
1,182,987	-		AO353_05375	0.16	-1.4
1,182,987	-		AO353_05375	0.16	+0.7
1,182,987	-		AO353_05375	0.16	+1.6
1,182,987	-		AO353_05375	0.16	+0.8
1,183,031	+				+0.3
1,183,032	-		AO353_05375	0.19	-2.0
1,183,032	-		AO353_05375	0.19	-1.7
1,183,032	-		AO353_05375	0.19	-0.0
1,183,032	-		AO353_05375	0.19	-0.4
1,183,087	+		AO353_05375	0.22	-1.6
1,183,087	+				+1.6
1,183,087	+		AO353_05375	0.22	+1.1
1,183,088	-		AO353_05375	0.22	-0.2
1,183,088	-		AO353_05375	0.22	-1.3
1,183,093	+		AO353_05375	0.23	-0.7
1,183,094	-		AO353_05375	0.23	+0.3
1,183,094	-		AO353_05375	0.23	-0.1
1,183,094	-		AO353_05375	0.23	-0.2
1,183,139	+		AO353_05375	0.25	-1.6
1,183,140	-		AO353_05375	0.26	-1.3
1,183,284	-		AO353_05375	0.34	-0.4
1,183,284	-		AO353_05375	0.34	-2.2
1,183,368	-		AO353_05375	0.40	-1.6
1,183,409	+		AO353_05375	0.42	-0.5
1,183,409	+		AO353_05375	0.42	+2.3
1,183,409	+		AO353_05375	0.42	-0.7
1,183,410	-		AO353_05375	0.42	-1.4
1,183,410	-		AO353_05375	0.42	+0.8