Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05230

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,150,604	-		AO353_05225	0.76	-0.7
1,150,651	+		AO353_05225	0.78	-2.4
1,150,651	+		AO353_05225	0.78	-1.7
1,150,819	+		AO353_05225	0.82	+1.4
1,150,819	+		AO353_05225	0.82	-0.7
1,150,819	+		AO353_05225	0.82	+0.6
1,150,820	-		AO353_05225	0.82	-0.5
1,150,943	+		AO353_05225	0.85	-0.9
1,150,943	+		AO353_05225	0.85	-1.2
1,150,943	+		AO353_05225	0.85	-0.6
1,150,944	-		AO353_05225	0.85	-0.6
1,150,960	+		AO353_05225	0.86	-1.1
1,150,960	+		AO353_05225	0.86	-1.2
1,150,960	+		AO353_05225	0.86	-1.0
1,150,960	+		AO353_05225	0.86	+0.3
1,150,960	+		AO353_05225	0.86	-1.5
1,150,960	+		AO353_05225	0.86	-0.6
1,150,960	+		AO353_05225	0.86	+0.2
1,150,960	+		AO353_05225	0.86	+0.4
1,150,960	+		AO353_05225	0.86	-1.0
1,150,960	+		AO353_05225	0.86	-1.5
1,150,960	+		AO353_05225	0.86	+1.8
1,150,960	+		AO353_05225	0.86	-1.4
1,150,960	+		AO353_05225	0.86	-0.3
1,150,960	+		AO353_05225	0.86	+0.3
1,150,960	+		AO353_05225	0.86	-0.7
1,150,960	+		AO353_05225	0.86	-0.2
1,150,961	-		AO353_05225	0.86	-1.3
1,150,961	-		AO353_05225	0.86	+0.1
1,150,961	-		AO353_05225	0.86	-1.7
1,150,961	-		AO353_05225	0.86	-1.2
1,150,961	-		AO353_05225	0.86	-0.0
1,150,961	-		AO353_05225	0.86	+0.4
1,150,961	-		AO353_05225	0.86	-0.9
1,151,413	+				-1.3
1,151,413	+				-0.6
1,151,413	+				-1.6
1,151,413	+				-0.5
1,151,413	+				-2.8
1,151,414	-				-1.0
1,151,414	-				-0.0
1,151,436	+				-0.6
1,151,551	+				-1.0
1,151,552	-				-1.3
1,151,552	-				-0.4
1,151,552	-				-0.1
1,151,587	+				-0.7
1,151,587	+				+2.4
1,151,587	+				+0.8
1,151,587	+				+0.6
1,151,587	+				-0.5
1,151,587	+				+0.9
1,151,587	+				+2.6
1,151,588	-				+3.8
1,151,588	-				+2.9
1,151,588	-				+1.2
1,151,588	-				+3.2
1,151,588	-				+0.5
1,151,588	-				+1.4
1,151,588	-				+0.7
1,151,602	+				+2.4
1,151,602	+				+1.9
1,151,602	+				+1.6
1,151,602	+				-0.2
1,151,603	-				+2.0
1,151,603	-				+2.6
1,151,603	-				+2.3
1,151,603	-				+2.4
1,151,603	-				+4.0
1,151,713	-				+2.9
1,151,773	+		AO353_05230	0.14	-1.7
1,151,774	-		AO353_05230	0.14	+0.5
1,151,774	-		AO353_05230	0.14	+1.5
1,151,951	+		AO353_05230	0.26	+2.6
1,151,951	+		AO353_05230	0.26	-0.4
1,151,952	-		AO353_05230	0.26	+0.9
1,151,952	-		AO353_05230	0.26	+1.9
1,151,952	-		AO353_05230	0.26	+2.0
1,152,166	+		AO353_05230	0.41	+0.6
1,152,229	+		AO353_05230	0.45	+2.4
1,152,229	+		AO353_05230	0.45	+0.9
1,152,229	+		AO353_05230	0.45	+1.8
1,152,229	+		AO353_05230	0.45	-1.5
1,152,229	+		AO353_05230	0.45	-0.4
1,152,229	+		AO353_05230	0.45	+1.2
1,152,230	-		AO353_05230	0.45	+1.4
1,152,230	-		AO353_05230	0.45	+2.1
1,152,230	-		AO353_05230	0.45	+1.8
1,152,230	-		AO353_05230	0.45	+2.2
1,152,230	-		AO353_05230	0.45	+1.7
1,152,230	-		AO353_05230	0.45	+1.3
1,152,230	-		AO353_05230	0.45	+1.3
1,152,230	-		AO353_05230	0.45	+1.9
1,152,230	-		AO353_05230	0.45	+2.5
1,152,230	-		AO353_05230	0.45	+2.4
1,152,409	+		AO353_05230	0.58	-0.0
1,152,409	+		AO353_05230	0.58	+1.3
1,152,409	+		AO353_05230	0.58	+1.1
1,152,410	-		AO353_05230	0.58	+1.4
1,152,410	-		AO353_05230	0.58	+0.5
1,152,410	-		AO353_05230	0.58	-0.0
1,152,414	+		AO353_05230	0.58	+1.6
1,152,414	+		AO353_05230	0.58	+1.5
1,152,415	-		AO353_05230	0.58	+1.3
1,152,415	-		AO353_05230	0.58	+0.1
1,152,475	+		AO353_05230	0.62	+1.0
1,152,476	-		AO353_05230	0.62	+3.4
1,152,533	+		AO353_05230	0.66	+1.2
1,152,534	-		AO353_05230	0.66	+3.7
1,152,534	-		AO353_05230	0.66	+0.4
1,152,658	+		AO353_05230	0.75	+1.2
1,152,658	+		AO353_05230	0.75	+2.1
1,152,659	-		AO353_05230	0.75	+1.5
1,152,659	-		AO353_05230	0.75	+2.2
1,152,659	-		AO353_05230	0.75	+1.6
1,152,659	-		AO353_05230	0.75	-1.2
1,152,659	-		AO353_05230	0.75	-0.4
1,152,667	+		AO353_05230	0.75	+1.2
1,152,667	+		AO353_05230	0.75	-0.2
1,152,825	-		AO353_05230	0.86	-0.7
1,152,893	+				+0.0
1,152,894	-				+1.3
1,152,894	-				+1.4
1,152,894	-				+1.9
1,152,894	-				+2.3
1,152,894	-				+2.1
1,152,894	-				+2.6
1,152,899	+				+1.8
1,152,900	-				+0.5
1,152,900	-				+2.2
1,152,901	+				+0.8
1,152,901	+				+1.3
1,152,901	+				+1.9
1,152,901	+				+0.4
1,152,901	+				-1.0
1,152,901	+				+0.4
1,152,901	+				+2.5
1,152,901	+				+0.2
1,152,901	+				+2.1
1,152,901	+				+0.4
1,152,901	+				+3.1
1,152,902	-				-0.2
1,152,902	-				+1.9
1,152,902	-				+2.3
1,152,902	-				+1.4
1,152,902	-				+2.8
1,152,902	-				+0.5
1,152,902	-				+1.5
1,152,902	-				+1.1
1,153,046	+				-0.4
1,153,046	+				-0.6
1,153,046	+				+0.5
1,153,046	+				-1.5
1,153,046	+				+0.6
1,153,046	+				+1.1
1,153,047	-				-0.2
1,153,047	-				-1.4
1,153,047	-				-1.8
1,153,047	-				+0.1
1,153,047	-				+1.3
1,153,047	-				+0.8
1,153,047	-				-0.0
1,153,047	-				-0.0
1,153,056	+				-1.4
1,153,076	-				-0.1
1,153,113	+				-2.1
1,153,114	-				-0.6
1,153,174	+		AO353_05235	0.17	+0.9
1,153,175	-		AO353_05235	0.17	-0.6
1,153,280	+		AO353_05235	0.34	+1.8
1,153,280	+		AO353_05235	0.34	-0.9
1,153,280	+		AO353_05235	0.34	-0.9
1,153,281	-		AO353_05235	0.34	+1.1
1,153,281	-		AO353_05235	0.34	+1.0
1,153,281	-		AO353_05235	0.34	+0.3
1,153,333	+		AO353_05235	0.42	-2.0
1,153,334	-		AO353_05235	0.43	-0.4
1,153,400	+		AO353_05235	0.53	-0.4
1,153,400	+		AO353_05235	0.53	+1.6
1,153,400	+		AO353_05235	0.53	+1.8
1,153,400	+		AO353_05235	0.53	+0.8
1,153,400	+		AO353_05235	0.53	+0.7
1,153,400	+		AO353_05235	0.53	-0.2
1,153,400	+		AO353_05235	0.53	-1.4
1,153,400	+		AO353_05235	0.53	+0.3
1,153,400	+		AO353_05235	0.53	-0.2
1,153,400	+		AO353_05235	0.53	+0.0
1,153,400	+		AO353_05235	0.53	+0.4
1,153,401	-		AO353_05235	0.53	-0.4
1,153,401	-		AO353_05235	0.53	+0.5
1,153,401	-		AO353_05235	0.53	+1.3
1,153,401	-		AO353_05235	0.53	-1.0
1,153,437	+		AO353_05235	0.59	-0.6
1,153,437	+		AO353_05235	0.59	+0.3
1,153,437	+		AO353_05235	0.59	-0.0
1,153,437	+		AO353_05235	0.59	-2.6
1,153,437	+		AO353_05235	0.59	-0.2
1,153,437	+		AO353_05235	0.59	-0.9
1,153,437	+		AO353_05235	0.59	-0.4
1,153,437	+		AO353_05235	0.59	-1.4
1,153,437	+		AO353_05235	0.59	-0.4
1,153,437	+		AO353_05235	0.59	-1.1
1,153,437	+		AO353_05235	0.59	-1.0
1,153,438	-		AO353_05235	0.59	-0.5
1,153,438	-		AO353_05235	0.59	+0.3
1,153,438	-		AO353_05235	0.59	-0.0
1,153,438	-		AO353_05235	0.59	-1.3
1,153,438	-		AO353_05235	0.59	+1.0
1,153,438	-		AO353_05235	0.59	-1.7
1,153,438	-		AO353_05235	0.59	-1.3
1,153,438	-		AO353_05235	0.59	-0.2
1,153,438	-		AO353_05235	0.59	+1.6
1,153,438	-		AO353_05235	0.59	+1.3
1,153,438	-		AO353_05235	0.59	-0.2
1,153,438	-		AO353_05235	0.59	+1.0
1,153,558	+		AO353_05235	0.79	-0.2
1,153,558	+		AO353_05235	0.79	-1.7
1,153,558	+		AO353_05235	0.79	-0.9
1,153,558	+		AO353_05235	0.79	-0.2
1,153,559	-		AO353_05235	0.79	-0.4
1,153,559	-		AO353_05235	0.79	-0.7
1,153,559	-		AO353_05235	0.79	+0.8
1,153,559	-		AO353_05235	0.79	-0.0
1,153,559	-		AO353_05235	0.79	+1.0
1,153,559	-		AO353_05235	0.79	+1.0
1,153,577	+		AO353_05235	0.82	+1.6
1,153,733	+				+1.4
1,153,733	+				-0.0
1,153,733	+				-0.3
1,153,734	-				+0.1