Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04960

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,093,359	+				+1.3
1,093,359	+				-0.0
1,093,359	+				-0.8
1,093,359	+				-1.0
1,093,360	-				-1.4
1,093,388	+				-1.5
1,093,388	+				+1.0
1,093,389	-				-1.0
1,093,389	-				+0.2
1,093,398	+				-1.8
1,093,398	+				-0.5
1,093,399	-				+0.1
1,093,399	-				+0.1
1,093,399	-				+0.1
1,093,399	-				-0.0
1,093,399	-				+0.1
1,093,405	+				-0.4
1,093,405	+				+1.0
1,093,405	+				-0.8
1,093,405	+				+0.3
1,093,406	-				-0.8
1,093,406	-				+0.2
1,093,406	-				-0.6
1,093,406	-				-0.8
1,093,443	+				-0.6
1,093,443	+				-0.0
1,093,443	+				-1.7
1,093,443	+				-0.6
1,093,463	+				-0.2
1,093,463	+				-0.6
1,093,463	+				-0.0
1,093,463	+				-0.9
1,093,463	+				+0.5
1,093,463	+				-1.7
1,093,463	+				-0.4
1,093,463	+				+1.6
1,093,463	+				-0.3
1,093,463	+				+1.7
1,093,463	+				-0.9
1,093,463	+				-1.8
1,093,463	+				+0.3
1,093,463	+				-0.9
1,093,464	-				+1.5
1,093,464	-				+0.6
1,093,464	-				-2.1
1,093,464	-				+2.5
1,093,464	-				+0.2
1,093,464	-				+2.2
1,093,464	-				-0.7
1,093,467	+				+0.4
1,093,467	+				+1.1
1,093,467	+				-0.0
1,093,467	+				+0.6
1,093,467	+				+0.5
1,093,467	+				+0.2
1,093,468	-				-0.1
1,093,468	-				-1.4
1,093,468	-				-3.0
1,093,468	-				+1.0
1,093,468	-				+0.4
1,093,487	+				-0.3
1,093,487	+				-2.3
1,093,487	+				-0.8
1,093,487	+				-0.6
1,093,488	-				+1.0
1,093,488	-				+1.0
1,093,489	+				-1.2
1,093,489	+				-1.4
1,093,489	+				-1.5
1,093,490	-				-0.0
1,093,490	-				-0.8
1,093,490	-				-0.1
1,093,490	-				-0.0
1,093,666	+		AO353_04955	0.20	-1.5
1,093,666	+		AO353_04955	0.20	-0.9
1,093,667	-		AO353_04955	0.21	-0.2
1,093,676	+		AO353_04955	0.22	+1.6
1,093,676	+		AO353_04955	0.22	+0.1
1,093,676	+		AO353_04955	0.22	-0.4
1,093,677	-		AO353_04955	0.22	-0.0
1,093,677	-		AO353_04955	0.22	-1.0
1,093,677	-		AO353_04955	0.22	+0.7
1,093,677	-		AO353_04955	0.22	+0.2
1,093,722	-		AO353_04955	0.28	-2.9
1,093,743	-		AO353_04955	0.31	+0.6
1,093,743	-		AO353_04955	0.31	+0.7
1,093,854	+		AO353_04955	0.47	-0.8
1,093,962	+		AO353_04955	0.62	-0.0
1,093,962	+		AO353_04955	0.62	-2.6
1,093,963	-		AO353_04955	0.62	+1.0
1,094,059	+		AO353_04955	0.76	-0.5
1,094,059	+		AO353_04955	0.76	+0.8
1,094,059	+		AO353_04955	0.76	+0.4
1,094,060	-		AO353_04955	0.76	+1.7
1,094,060	-		AO353_04955	0.76	-0.9
1,094,060	-		AO353_04955	0.76	-1.9
1,094,089	-		AO353_04955	0.80	-0.1
1,094,149	-		AO353_04955	0.88	-1.1
1,094,149	-		AO353_04955	0.88	+1.7
1,094,163	+				+1.0
1,094,163	+				-0.3
1,094,164	-				-1.3
1,094,164	-				-1.7
1,094,181	+				+0.4
1,094,181	+				-1.8
1,094,181	+				-1.5
1,094,181	+				+0.2
1,094,181	+				-2.1
1,094,181	+				-1.4
1,094,181	+				-0.6
1,094,181	+				+0.2
1,094,182	-				+1.0
1,094,182	-				-1.8
1,094,182	-				-0.0
1,094,182	-				-1.3
1,094,182	-				+1.3
1,094,182	-				-0.0
1,094,182	-				-2.1
1,094,182	-				-0.3
1,094,182	-				+0.3
1,094,182	-				-2.0
1,094,182	-				+0.4
1,094,182	-				+0.0
1,094,229	+				-0.7
1,094,229	+				-0.0
1,094,229	+				-0.6
1,094,230	-				+0.2
1,094,230	-				-1.4
1,094,230	-				-0.5
1,094,262	+				+1.6
1,094,280	-				-0.8
1,094,293	-				-1.1
1,094,295	+				-0.3
1,094,295	+				-1.3
1,094,295	+				-1.5
1,094,295	+				-0.3
1,094,295	+				+0.5
1,094,296	-				-2.0
1,094,296	-				-0.1
1,094,296	-				+1.6
1,094,296	-				-0.3
1,094,296	-				+0.7
1,094,296	-				-0.0
1,094,366	+		AO353_04960	0.20	-2.0
1,094,366	+		AO353_04960	0.20	-0.8
1,094,366	+		AO353_04960	0.20	-1.0
1,094,366	+		AO353_04960	0.20	-1.9
1,094,367	-		AO353_04960	0.20	-0.4
1,094,367	-		AO353_04960	0.20	+0.4
1,094,367	-		AO353_04960	0.20	-0.6
1,094,382	-		AO353_04960	0.23	+0.6
1,094,382	-		AO353_04960	0.23	+0.2
1,094,382	-		AO353_04960	0.23	-0.4
1,094,468	+		AO353_04960	0.38	-0.4
1,094,469	-		AO353_04960	0.38	-0.0
1,094,522	+		AO353_04960	0.48	+0.8
1,094,522	+		AO353_04960	0.48	+0.9
1,094,522	+		AO353_04960	0.48	-0.1
1,094,522	+		AO353_04960	0.48	-0.0
1,094,522	+		AO353_04960	0.48	-1.0
1,094,522	+		AO353_04960	0.48	-0.5
1,094,522	+		AO353_04960	0.48	+0.2
1,094,522	+		AO353_04960	0.48	+0.6
1,094,522	+		AO353_04960	0.48	-0.8
1,094,522	+		AO353_04960	0.48	-0.4
1,094,523	-		AO353_04960	0.48	+3.2
1,094,523	-		AO353_04960	0.48	-2.3
1,094,523	-		AO353_04960	0.48	+0.2
1,094,523	-		AO353_04960	0.48	-0.0
1,094,523	-		AO353_04960	0.48	+0.2
1,094,523	-		AO353_04960	0.48	-0.8
1,094,523	-		AO353_04960	0.48	+1.1
1,094,523	-		AO353_04960	0.48	-1.3
1,094,523	-		AO353_04960	0.48	-2.1
1,094,523	-		AO353_04960	0.48	-1.5
1,094,523	-		AO353_04960	0.48	-0.3
1,094,523	-		AO353_04960	0.48	+1.2
1,094,523	-		AO353_04960	0.48	-0.7
1,094,524	+		AO353_04960	0.48	-1.1
1,094,524	+		AO353_04960	0.48	+0.8
1,094,524	+		AO353_04960	0.48	-1.1
1,094,524	+		AO353_04960	0.48	+0.8
1,094,524	+		AO353_04960	0.48	-0.3
1,094,524	+		AO353_04960	0.48	-0.6
1,094,524	+		AO353_04960	0.48	+0.3
1,094,524	+		AO353_04960	0.48	-1.3
1,094,524	+		AO353_04960	0.48	-1.6
1,094,524	+		AO353_04960	0.48	+0.1
1,094,524	+		AO353_04960	0.48	-0.3
1,094,524	+		AO353_04960	0.48	-0.3
1,094,524	+		AO353_04960	0.48	-0.9
1,094,524	+		AO353_04960	0.48	-1.6
1,094,525	-		AO353_04960	0.48	-2.7
1,094,525	-		AO353_04960	0.48	-0.4
1,094,525	-		AO353_04960	0.48	+0.1
1,094,525	-		AO353_04960	0.48	-0.3
1,094,525	-		AO353_04960	0.48	+0.9
1,094,525	-		AO353_04960	0.48	+7.8
1,094,525	-		AO353_04960	0.48	-0.9
1,094,525	-		AO353_04960	0.48	-0.5
1,094,525	-		AO353_04960	0.48	+1.4
1,094,525	-		AO353_04960	0.48	-0.6
1,094,525	-		AO353_04960	0.48	-0.8
1,094,525	-		AO353_04960	0.48	-2.3
1,094,525	-		AO353_04960	0.48	+0.3
1,094,525	-		AO353_04960	0.48	+0.1
1,094,525	-		AO353_04960	0.48	-0.0
1,094,813	+				+2.0
1,094,813	+				+0.4
1,094,813	+				-0.2
1,094,813	+				-0.5
1,094,813	+				+0.4
1,094,813	+				+1.0
1,094,813	+				-0.5
1,094,813	+				-0.7
1,094,813	+				-1.6
1,094,813	+				-1.0
1,094,813	+				-0.3
1,094,814	-				+1.1
1,094,814	-				+0.2
1,094,814	-				+0.6
1,094,814	-				+0.2
1,094,814	-				+0.5
1,094,814	-				-0.0
1,094,814	-				-1.2
1,094,944	+		AO353_04965	0.34	-0.6
1,094,945	-		AO353_04965	0.34	-1.5
1,094,996	-		AO353_04965	0.48	+1.0
1,094,996	-		AO353_04965	0.48	-1.4
1,094,996	-		AO353_04965	0.48	-0.0
1,094,996	-		AO353_04965	0.48	+0.0
1,095,007	-		AO353_04965	0.51	-0.2
1,095,007	-		AO353_04965	0.51	+1.0
1,095,074	+		AO353_04965	0.69	-0.8
1,095,074	+		AO353_04965	0.69	+0.2
1,095,075	-		AO353_04965	0.69	-0.3
1,095,075	-		AO353_04965	0.69	-0.6
1,095,109	+		AO353_04965	0.78	+1.0
1,095,110	-		AO353_04965	0.78	+0.4
1,095,204	+				+0.5
1,095,205	-				+0.0
1,095,205	-				-0.9
1,095,220	+				+0.5
1,095,220	+				+0.2
1,095,220	+				+1.0
1,095,221	-				-0.9
1,095,221	-				-0.1
1,095,221	-				+0.2
1,095,221	-				-1.0
1,095,242	+				-1.2
1,095,243	-				+0.4
1,095,396	+		AO353_04970	0.46	+0.2
1,095,397	-		AO353_04970	0.47	+0.3
1,095,397	-		AO353_04970	0.47	+0.5
1,095,397	-		AO353_04970	0.47	-0.9
1,095,459	+		AO353_04970	0.68	+1.1
1,095,472	-		AO353_04970	0.72	+1.8
1,095,472	-		AO353_04970	0.72	+0.2
1,095,492	+		AO353_04970	0.79	+0.2
1,095,552	+				+0.5
1,095,582	-				-0.6
1,095,582	-				-1.0
1,095,582	-				-1.9
1,095,587	+				-1.2
1,095,587	+				-0.6
1,095,587	+				-0.6
1,095,588	-				-1.2
1,095,588	-				-0.3
1,095,601	+				-0.0
1,095,602	-				-0.7
1,095,602	-				-2.0
1,095,602	-				-1.3
1,095,625	+				-1.6
1,095,625	+				-1.5
1,095,625	+				-0.5
1,095,626	-				+0.9
1,095,626	-				+0.5
1,095,626	-				+0.2
1,095,626	-				+2.1
1,095,626	-				+0.5
1,095,626	-				-1.0
1,095,645	+				+1.3
1,095,645	+				+0.7
1,095,646	-				-1.6
1,095,646	-				+0.2
1,095,735	+				-0.3
1,095,735	+				-0.0
1,095,735	+				+0.5
1,095,735	+				+1.8
1,095,791	-				+0.9
1,095,809	+				-2.0
1,095,810	-				-0.4
1,095,810	-				-0.5