Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04885

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
1,079,200	+		AO353_04880	0.66	+1.8
1,079,200	+		AO353_04880	0.66	+1.2
1,079,200	+		AO353_04880	0.66	+1.9
1,079,230	+		AO353_04880	0.67	-0.9
1,079,230	+		AO353_04880	0.67	+0.5
1,079,230	+		AO353_04880	0.67	-0.3
1,079,230	+		AO353_04880	0.67	-0.5
1,079,230	+		AO353_04880	0.67	+0.0
1,079,230	+		AO353_04880	0.67	+1.7
1,079,230	+		AO353_04880	0.67	-2.3
1,079,230	+		AO353_04880	0.67	-1.1
1,079,230	+		AO353_04880	0.67	-1.3
1,079,230	+		AO353_04880	0.67	-2.5
1,079,230	+		AO353_04880	0.67	+1.7
1,079,230	+		AO353_04880	0.67	+0.9
1,079,230	+		AO353_04880	0.67	+0.5
1,079,230	+		AO353_04880	0.67	+2.1
1,079,231	-		AO353_04880	0.67	-0.6
1,079,231	-		AO353_04880	0.67	-0.3
1,079,231	-		AO353_04880	0.67	+0.2
1,079,231	-		AO353_04880	0.67	-0.1
1,079,293	+		AO353_04880	0.69	+0.2
1,079,293	+		AO353_04880	0.69	+1.5
1,079,294	-		AO353_04880	0.69	+0.7
1,079,438	+		AO353_04880	0.75	-0.6
1,079,439	-		AO353_04880	0.75	-0.8
1,079,608	+		AO353_04880	0.82	-1.4
1,079,608	+		AO353_04880	0.82	+0.3
1,079,608	+		AO353_04880	0.82	+0.1
1,079,608	+		AO353_04880	0.82	+0.4
1,079,608	+		AO353_04880	0.82	+0.0
1,079,609	-		AO353_04880	0.82	-0.3
1,079,609	-		AO353_04880	0.82	-0.2
1,079,609	-		AO353_04880	0.82	-1.2
1,079,609	-		AO353_04880	0.82	-0.5
1,079,609	-		AO353_04880	0.82	+1.7
1,079,818	+				+0.0
1,079,819	-				+1.5
1,079,819	-				-0.6
1,079,819	-				+1.1
1,080,056	+				-0.5
1,080,057	-				-2.5
1,080,057	-				+2.3
1,080,057	-				+0.1
1,080,117	+				-1.9
1,080,139	+				-0.8
1,080,140	-				-0.6
1,080,155	+				-0.5
1,080,156	-				-0.4
1,080,156	-				+0.9
1,080,177	+				+0.2
1,080,177	+				+1.5
1,080,177	+				+0.1
1,080,178	-				+0.4
1,080,178	-				-1.5
1,080,178	-				-0.8
1,080,252	+				+0.8
1,080,252	+				-0.6
1,080,252	+				-2.4
1,080,253	-				+0.2
1,080,253	-				+0.5
1,080,253	-				-0.8
1,080,253	-				-1.0
1,080,253	-				-1.3
1,080,366	+		AO353_04885	0.11	-0.5
1,080,366	+		AO353_04885	0.11	-0.8
1,080,366	+		AO353_04885	0.11	+2.5
1,080,391	+		AO353_04885	0.13	+1.1
1,080,392	-		AO353_04885	0.13	+0.2
1,080,572	-		AO353_04885	0.23	+0.3
1,080,600	+		AO353_04885	0.25	+0.9
1,080,806	-		AO353_04885	0.37	-1.3
1,080,815	+		AO353_04885	0.38	-2.4
1,080,815	+		AO353_04885	0.38	+1.5
1,080,815	+		AO353_04885	0.38	-0.2
1,080,815	+		AO353_04885	0.38	-1.5
1,080,815	+		AO353_04885	0.38	+0.3
1,080,816	-		AO353_04885	0.38	-1.4
1,080,816	-		AO353_04885	0.38	-0.3
1,080,886	+		AO353_04885	0.42	-0.1
1,080,886	+		AO353_04885	0.42	-1.4
1,080,886	+		AO353_04885	0.42	+1.2
1,080,886	+		AO353_04885	0.42	-1.9
1,080,886	+		AO353_04885	0.42	+0.5
1,080,887	-		AO353_04885	0.42	-0.6
1,080,887	-		AO353_04885	0.42	+0.2
1,080,887	-		AO353_04885	0.42	-0.8
1,080,887	-		AO353_04885	0.42	-1.1
1,080,887	-		AO353_04885	0.42	+0.1
1,080,960	+		AO353_04885	0.46	-1.5
1,080,960	+		AO353_04885	0.46	+0.4
1,080,960	+		AO353_04885	0.46	-1.0
1,080,961	-		AO353_04885	0.46	+0.9
1,080,961	-		AO353_04885	0.46	-1.5
1,080,961	-		AO353_04885	0.46	+0.5
1,081,005	+		AO353_04885	0.49	-1.2
1,081,005	+		AO353_04885	0.49	-0.8
1,081,005	+		AO353_04885	0.49	-1.2
1,081,005	+		AO353_04885	0.49	+1.1
1,081,006	-		AO353_04885	0.49	+1.4
1,081,006	-		AO353_04885	0.49	+0.8
1,081,110	+		AO353_04885	0.55	+0.2
1,081,111	-		AO353_04885	0.55	+0.4
1,081,722	+				+1.2
1,081,740	+				-0.8
1,081,741	-				-0.5
1,081,940	-				+1.0
1,081,967	-				+0.5
1,081,967	-				-0.1
1,081,967	-				-0.1
1,081,971	+				+0.2
1,081,971	+				+1.2
1,081,971	+				-1.6
1,081,971	+				-1.3
1,081,971	+				+0.1
1,081,971	+				-0.6
1,081,971	+				+0.3
1,081,972	-				-2.1
1,081,972	-				-0.6
1,082,019	+		AO353_04890	0.16	-0.5
1,082,019	+		AO353_04890	0.16	-1.2
1,082,019	+		AO353_04890	0.16	+1.1
1,082,019	+		AO353_04890	0.16	+1.4
1,082,019	+		AO353_04890	0.16	+0.4
1,082,019	+		AO353_04890	0.16	-1.6
1,082,020	-		AO353_04890	0.16	+1.1
1,082,020	-		AO353_04890	0.16	+0.8
1,082,096	+		AO353_04890	0.28	-1.0
1,082,096	+		AO353_04890	0.28	+0.3
1,082,097	-		AO353_04890	0.28	-0.6
1,082,276	+		AO353_04890	0.56	+0.5
1,082,276	+		AO353_04890	0.56	-0.1
1,082,276	+		AO353_04890	0.56	+0.9
1,082,277	-		AO353_04890	0.56	-0.3
1,082,422	+		AO353_04890	0.79	-0.5
1,082,422	+		AO353_04890	0.79	-0.7
1,082,423	-		AO353_04890	0.79	+0.9
1,082,468	+		AO353_04890	0.86	+1.7
1,082,525	+				+0.6
1,082,525	+				-0.5
1,082,525	+				+1.5
1,082,525	+				-0.1
1,082,525	+				+0.7
1,082,526	-				-1.6
1,082,526	-				+0.1
1,082,526	-				+0.5
1,082,532	+				+0.3
1,082,532	+				+1.3
1,082,532	+				-0.7
1,082,532	+				+0.5
1,082,532	+				-0.5
1,082,533	-				-0.6
1,082,533	-				-0.1
1,082,533	-				+2.0
1,082,647	+				-1.2
1,082,647	+				+0.5
1,082,647	+				+0.2
1,082,647	+				+0.0
1,082,647	+				-0.9
1,082,647	+				-1.1
1,082,647	+				+0.2
1,082,647	+				-1.4
1,082,647	+				+1.7
1,082,648	-				-2.0
1,082,648	-				-2.1
1,082,648	-				-0.2
1,082,648	-				-0.1
1,082,648	-				-0.1
1,082,651	-				-1.2
1,082,651	-				+0.0
1,082,651	-				-0.3
1,082,657	+				+0.9
1,082,657	+				-1.1
1,082,657	+				+1.3
1,082,657	+				+2.0
1,082,658	-				-2.3
1,082,719	+				-0.4
1,082,719	+				+0.7
1,082,720	-				-0.1
1,082,720	-				+0.3
1,082,720	-				-1.0
1,082,720	-				+0.2
1,082,720	-				-1.4
1,082,720	-				-0.6
1,082,733	+				+0.2
1,082,733	+				+1.5
1,082,733	+				+0.6
1,082,734	-				-0.9
1,082,734	-				-0.6
1,082,781	-				-0.6
1,082,794	+				-0.2
1,082,794	+				-1.4
1,082,794	+				-0.5
1,082,795	-				-0.7
1,082,795	-				-0.9
1,082,795	-				-0.3
1,082,860	+		AO353_04895	0.12	+0.2
1,082,860	+		AO353_04895	0.12	+0.5
1,082,863	+		AO353_04895	0.12	-0.7
1,082,863	+		AO353_04895	0.12	-0.5
1,082,863	+		AO353_04895	0.12	-1.1
1,082,863	+		AO353_04895	0.12	+2.1
1,082,864	-		AO353_04895	0.12	-1.4
1,082,864	-		AO353_04895	0.12	+1.1
1,082,864	-		AO353_04895	0.12	-1.1
1,082,864	-		AO353_04895	0.12	+1.9
1,082,864	-		AO353_04895	0.12	-0.7
1,082,864	-		AO353_04895	0.12	-0.1
1,082,864	-		AO353_04895	0.12	-1.9
1,082,864	-		AO353_04895	0.12	-0.1
1,082,864	-		AO353_04895	0.12	+0.9
1,082,875	+		AO353_04895	0.12	+0.0
1,082,875	+		AO353_04895	0.12	-0.3
1,082,875	+		AO353_04895	0.12	+0.1
1,082,875	+		AO353_04895	0.12	-0.1
1,082,875	+		AO353_04895	0.12	+0.9
1,082,875	+		AO353_04895	0.12	-0.1
1,082,875	+		AO353_04895	0.12	+1.1
1,082,876	-		AO353_04895	0.13	-0.1
1,082,876	-		AO353_04895	0.13	-0.9
1,082,876	-		AO353_04895	0.13	-0.9
1,082,876	-		AO353_04895	0.13	+1.9
1,082,876	-		AO353_04895	0.13	+0.4
1,082,876	-		AO353_04895	0.13	+0.1
1,082,876	-		AO353_04895	0.13	+2.1
1,082,876	-		AO353_04895	0.13	-0.6