Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03475 and AO353_03480 are separated by 221 nucleotides AO353_03480 and AO353_03485 are separated by 57 nucleotides AO353_03485 and AO353_03490 are separated by 182 nucleotides
AO353_03475: AO353_03475 - ornithine carbamoyltransferase, at 743,081 to 744,091
_03475
AO353_03480: AO353_03480 - carbamate kinase, at 744,313 to 745,242
_03480
AO353_03485: AO353_03485 - acetyl-CoA carboxylase, at 745,300 to 745,656
_03485
AO353_03490: AO353_03490 - Fis family transcriptional regulator, at 745,839 to 747,347
_03490
Position (kb) 744
745
746 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 743.555 kb on + strand, within AO353_03475 at 743.556 kb on - strand, within AO353_03475 at 743.556 kb on - strand, within AO353_03475 at 743.556 kb on - strand, within AO353_03475 at 743.561 kb on + strand, within AO353_03475 at 743.561 kb on + strand, within AO353_03475 at 743.561 kb on + strand, within AO353_03475 at 743.561 kb on + strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.562 kb on - strand, within AO353_03475 at 743.579 kb on + strand, within AO353_03475 at 743.631 kb on + strand, within AO353_03475 at 743.631 kb on + strand, within AO353_03475 at 743.631 kb on + strand, within AO353_03475 at 743.631 kb on + strand, within AO353_03475 at 743.632 kb on - strand, within AO353_03475 at 743.632 kb on - strand, within AO353_03475 at 743.632 kb on - strand, within AO353_03475 at 743.632 kb on - strand, within AO353_03475 at 743.632 kb on - strand, within AO353_03475 at 743.632 kb on - strand, within AO353_03475 at 743.719 kb on + strand, within AO353_03475 at 743.841 kb on - strand, within AO353_03475 at 743.854 kb on + strand, within AO353_03475 at 743.986 kb on - strand, within AO353_03475 at 743.986 kb on - strand, within AO353_03475 at 743.997 kb on + strand at 743.997 kb on + strand at 743.997 kb on + strand at 743.998 kb on - strand at 743.998 kb on - strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.089 kb on + strand at 744.090 kb on - strand at 744.090 kb on - strand at 744.090 kb on - strand at 744.090 kb on - strand at 744.090 kb on - strand at 744.090 kb on - strand at 744.090 kb on - strand at 744.180 kb on + strand at 744.180 kb on + strand at 744.214 kb on + strand at 744.280 kb on + strand at 744.312 kb on + strand at 744.312 kb on + strand at 744.313 kb on - strand at 744.393 kb on + strand at 744.502 kb on + strand, within AO353_03480 at 744.502 kb on + strand, within AO353_03480 at 744.503 kb on - strand, within AO353_03480 at 744.503 kb on - strand, within AO353_03480 at 744.503 kb on - strand, within AO353_03480 at 744.565 kb on + strand at 744.565 kb on + strand, within AO353_03480 at 744.566 kb on - strand, within AO353_03480 at 744.694 kb on + strand, within AO353_03480 at 744.694 kb on + strand, within AO353_03480 at 744.694 kb on + strand, within AO353_03480 at 744.695 kb on - strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 745.227 kb on + strand at 745.234 kb on + strand at 745.234 kb on + strand at 745.234 kb on + strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.241 kb on - strand at 745.241 kb on - strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.366 kb on + strand, within AO353_03485 at 745.366 kb on + strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.654 kb on + strand at 745.654 kb on + strand at 745.654 kb on + strand at 745.654 kb on + strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.657 kb on + strand at 745.657 kb on + strand at 745.658 kb on - strand at 745.658 kb on - strand at 745.709 kb on + strand at 745.709 kb on + strand at 745.710 kb on - strand at 745.710 kb on - strand at 745.710 kb on - strand at 745.710 kb on - strand at 745.717 kb on - strand at 745.717 kb on - strand at 745.717 kb on - strand at 745.717 kb on - strand at 745.755 kb on + strand at 745.755 kb on + strand at 745.766 kb on + strand at 745.766 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.953 kb on + strand at 745.953 kb on + strand at 745.954 kb on - strand at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 743,555 + AO353_03475 0.47 -2.2 743,556 - AO353_03475 0.47 -1.5 743,556 - AO353_03475 0.47 -1.5 743,556 - AO353_03475 0.47 +1.2 743,561 + AO353_03475 0.47 +1.1 743,561 + AO353_03475 0.47 -0.2 743,561 + AO353_03475 0.47 -1.0 743,561 + AO353_03475 0.47 -2.6 743,562 - AO353_03475 0.48 -0.1 743,562 - AO353_03475 0.48 +0.7 743,562 - AO353_03475 0.48 -0.5 743,562 - AO353_03475 0.48 -1.5 743,562 - AO353_03475 0.48 -0.6 743,562 - AO353_03475 0.48 +0.4 743,562 - AO353_03475 0.48 +0.6 743,579 + AO353_03475 0.49 +0.1 743,631 + AO353_03475 0.54 +1.1 743,631 + AO353_03475 0.54 -0.7 743,631 + AO353_03475 0.54 +1.1 743,631 + AO353_03475 0.54 +1.1 743,632 - AO353_03475 0.55 +0.2 743,632 - AO353_03475 0.55 -1.5 743,632 - AO353_03475 0.55 +0.3 743,632 - AO353_03475 0.55 -0.8 743,632 - AO353_03475 0.55 -0.4 743,632 - AO353_03475 0.55 +0.8 743,719 + AO353_03475 0.63 -0.1 743,841 - AO353_03475 0.75 -1.0 743,854 + AO353_03475 0.76 -0.1 743,986 - AO353_03475 0.90 -0.4 743,986 - AO353_03475 0.90 -0.9 743,997 + +1.1 743,997 + -0.7 743,997 + -0.1 743,998 - -0.0 743,998 - +2.4 744,089 + +2.4 744,089 + -0.9 744,089 + +1.4 744,089 + -0.4 744,089 + -0.4 744,089 + +6.6 744,089 + +1.1 744,089 + -1.4 744,089 + +0.6 744,090 - -0.6 744,090 - -1.0 744,090 - +0.4 744,090 - +0.4 744,090 - -0.1 744,090 - +2.4 744,090 - -1.1 744,180 + -0.7 744,180 + -0.3 744,214 + -0.3 744,280 + +0.2 744,312 + -2.0 744,312 + +0.1 744,313 - +1.3 744,393 + -1.6 744,502 + AO353_03480 0.20 -0.1 744,502 + AO353_03480 0.20 +0.3 744,503 - AO353_03480 0.20 -2.4 744,503 - AO353_03480 0.20 +0.9 744,503 - AO353_03480 0.20 -1.5 744,565 + +2.4 744,565 + AO353_03480 0.27 +1.8 744,566 - AO353_03480 0.27 -0.5 744,694 + AO353_03480 0.41 -0.1 744,694 + AO353_03480 0.41 +1.6 744,694 + AO353_03480 0.41 +0.1 744,695 - AO353_03480 0.41 -0.6 744,883 + AO353_03480 0.61 +0.9 744,883 + AO353_03480 0.61 -0.3 744,883 + AO353_03480 0.61 -0.3 744,883 + AO353_03480 0.61 +0.3 744,883 + AO353_03480 0.61 -0.1 744,883 + AO353_03480 0.61 -0.5 744,884 - AO353_03480 0.61 +0.4 744,884 - AO353_03480 0.61 -2.1 744,884 - AO353_03480 0.61 +0.5 744,884 - AO353_03480 0.61 +0.2 744,884 - AO353_03480 0.61 -0.4 744,884 - AO353_03480 0.61 +1.5 745,227 + +1.6 745,234 + +0.8 745,234 + -0.7 745,234 + +0.3 745,235 - +2.7 745,235 - -1.8 745,235 - -1.5 745,235 - +0.2 745,235 - -1.4 745,241 - +0.2 745,241 - +0.1 745,307 + +0.4 745,307 + +0.6 745,307 + +0.9 745,307 + -0.6 745,307 + -0.2 745,307 + +1.2 745,307 + +0.9 745,307 + -1.3 745,308 - -0.4 745,308 - -1.1 745,308 - -0.5 745,308 - -0.9 745,308 - -1.6 745,308 - -2.8 745,366 + AO353_03485 0.18 +0.1 745,366 + AO353_03485 0.18 +1.3 745,367 - AO353_03485 0.19 -0.8 745,367 - AO353_03485 0.19 +1.2 745,367 - AO353_03485 0.19 -1.3 745,367 - AO353_03485 0.19 -0.5 745,413 + AO353_03485 0.32 +0.3 745,413 + AO353_03485 0.32 +0.3 745,413 + AO353_03485 0.32 +0.3 745,413 + AO353_03485 0.32 -1.8 745,413 + AO353_03485 0.32 +2.1 745,413 + AO353_03485 0.32 +0.6 745,413 + AO353_03485 0.32 +0.6 745,413 + AO353_03485 0.32 +2.0 745,414 - AO353_03485 0.32 -0.8 745,414 - AO353_03485 0.32 +0.3 745,414 - AO353_03485 0.32 +1.9 745,414 - AO353_03485 0.32 +0.5 745,414 - AO353_03485 0.32 -0.6 745,414 - AO353_03485 0.32 +0.5 745,414 - AO353_03485 0.32 +2.2 745,414 - AO353_03485 0.32 +0.1 745,414 - AO353_03485 0.32 +1.0 745,415 + AO353_03485 0.32 +1.8 745,415 + AO353_03485 0.32 +0.9 745,415 + AO353_03485 0.32 +0.1 745,415 + AO353_03485 0.32 -1.0 745,415 + AO353_03485 0.32 +0.1 745,415 + AO353_03485 0.32 -1.1 745,415 + AO353_03485 0.32 +0.4 745,415 + AO353_03485 0.32 -0.4 745,415 + AO353_03485 0.32 -0.6 745,415 + AO353_03485 0.32 +1.6 745,415 + AO353_03485 0.32 +0.6 745,415 + AO353_03485 0.32 +0.2 745,415 + AO353_03485 0.32 +1.4 745,415 + AO353_03485 0.32 -2.1 745,415 + AO353_03485 0.32 +2.4 745,415 + AO353_03485 0.32 -2.5 745,415 + AO353_03485 0.32 -1.3 745,415 + AO353_03485 0.32 +0.6 745,415 + AO353_03485 0.32 +2.1 745,416 - AO353_03485 0.32 +0.2 745,416 - AO353_03485 0.32 -0.4 745,416 - AO353_03485 0.32 +0.3 745,416 - AO353_03485 0.32 -1.3 745,416 - AO353_03485 0.32 -0.6 745,416 - AO353_03485 0.32 +1.0 745,416 - AO353_03485 0.32 -0.7 745,416 - AO353_03485 0.32 -2.6 745,416 - AO353_03485 0.32 -1.9 745,416 - AO353_03485 0.32 +0.3 745,416 - AO353_03485 0.32 -0.6 745,416 - AO353_03485 0.32 +0.9 745,416 - AO353_03485 0.32 -0.8 745,416 - AO353_03485 0.32 -2.1 745,416 - AO353_03485 0.32 +0.3 745,416 - AO353_03485 0.32 +0.3 745,534 + AO353_03485 0.66 -0.9 745,534 + AO353_03485 0.66 +0.1 745,534 + AO353_03485 0.66 +0.8 745,534 + AO353_03485 0.66 +1.1 745,534 + AO353_03485 0.66 +0.9 745,535 - AO353_03485 0.66 +0.4 745,535 - AO353_03485 0.66 +1.3 745,535 - AO353_03485 0.66 +2.4 745,535 - AO353_03485 0.66 -0.4 745,576 + AO353_03485 0.77 +0.4 745,576 + AO353_03485 0.77 -0.7 745,576 + AO353_03485 0.77 +0.0 745,576 + AO353_03485 0.77 -0.1 745,576 + AO353_03485 0.77 -0.3 745,576 + AO353_03485 0.77 +0.4 745,577 - AO353_03485 0.78 +1.9 745,577 - AO353_03485 0.78 +0.4 745,577 - AO353_03485 0.78 +0.4 745,577 - AO353_03485 0.78 -0.5 745,577 - AO353_03485 0.78 -0.3 745,579 + AO353_03485 0.78 -1.3 745,579 + AO353_03485 0.78 -0.1 745,579 + AO353_03485 0.78 -0.0 745,579 + AO353_03485 0.78 +0.3 745,579 + AO353_03485 0.78 +2.0 745,579 + AO353_03485 0.78 +3.1 745,579 + AO353_03485 0.78 +0.5 745,580 - AO353_03485 0.78 -0.5 745,580 - AO353_03485 0.78 +1.0 745,580 - AO353_03485 0.78 -1.8 745,580 - AO353_03485 0.78 +0.1 745,601 + AO353_03485 0.84 -1.8 745,601 + AO353_03485 0.84 +1.0 745,601 + AO353_03485 0.84 -1.0 745,601 + AO353_03485 0.84 -1.8 745,602 - AO353_03485 0.85 +2.6 745,602 - AO353_03485 0.85 +1.2 745,602 - AO353_03485 0.85 +1.2 745,602 - AO353_03485 0.85 -0.6 745,602 - AO353_03485 0.85 +0.4 745,654 + +0.1 745,654 + -0.8 745,654 + -0.2 745,654 + -1.1 745,655 - -1.1 745,655 - +1.4 745,655 - +2.7 745,655 - -0.1 745,655 - +0.3 745,655 - +0.2 745,655 - -1.0 745,655 - +1.6 745,655 - +1.4 745,657 + +0.6 745,657 + +0.1 745,658 - -0.1 745,658 - -1.2 745,709 + +0.1 745,709 + -0.7 745,710 - +0.5 745,710 - -0.9 745,710 - -1.1 745,710 - -1.7 745,717 - -1.6 745,717 - +0.3 745,717 - +0.7 745,717 - -1.5 745,755 + +1.5 745,755 + +0.0 745,766 + +0.9 745,766 + +0.1 745,799 + -1.1 745,799 + -0.4 745,799 + -0.1 745,799 + +1.4 745,799 + -1.4 745,799 + -0.7 745,799 + +2.4 745,800 - +1.3 745,800 - +0.2 745,800 - -0.1 745,800 - -0.6 745,800 - -0.6 745,800 - -0.6 745,800 - -1.1 745,800 - +0.1 745,953 + -0.6 745,953 + +2.2 745,954 - -0.9 746,172 + AO353_03490 0.22 +0.4 746,172 + AO353_03490 0.22 -0.9 746,172 + AO353_03490 0.22 +0.1 746,172 + AO353_03490 0.22 -0.7 746,172 + AO353_03490 0.22 -0.9 746,172 + AO353_03490 0.22 -1.4
Or see this region's nucleotide sequence