Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03255 and AO353_03260 are separated by 306 nucleotides AO353_03260 and AO353_03265 are separated by 170 nucleotides
AO353_03255: AO353_03255 - LacI family transcriptional regulator, at 693,032 to 694,063
_03255
AO353_03260: AO353_03260 - epimerase, at 694,370 to 695,113
_03260
AO353_03265: AO353_03265 - siderophore synthetase, at 695,284 to 697,194
_03265
Position (kb) 694
695
696 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.404 kb on + strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.405 kb on - strand, within AO353_03255 at 693.414 kb on - strand, within AO353_03255 at 693.487 kb on + strand, within AO353_03255 at 693.488 kb on - strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.500 kb on + strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.501 kb on - strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.614 kb on + strand, within AO353_03255 at 693.615 kb on - strand, within AO353_03255 at 693.615 kb on - strand, within AO353_03255 at 693.693 kb on - strand, within AO353_03255 at 693.753 kb on + strand, within AO353_03255 at 693.753 kb on + strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 693.754 kb on - strand, within AO353_03255 at 694.027 kb on + strand at 694.042 kb on - strand at 694.057 kb on + strand at 694.057 kb on + strand at 694.058 kb on - strand at 694.058 kb on - strand at 694.058 kb on - strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.076 kb on + strand at 694.077 kb on - strand at 694.077 kb on - strand at 694.077 kb on - strand at 694.077 kb on - strand at 694.297 kb on + strand at 694.297 kb on + strand at 694.298 kb on - strand at 694.298 kb on - strand at 694.301 kb on + strand at 694.301 kb on + strand at 694.301 kb on + strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.302 kb on - strand at 694.329 kb on + strand at 694.329 kb on + strand at 694.329 kb on + strand at 694.330 kb on - strand at 694.330 kb on - strand at 694.330 kb on - strand at 694.386 kb on + strand at 694.386 kb on + strand at 694.386 kb on + strand at 694.387 kb on - strand at 694.387 kb on - strand at 694.387 kb on - strand at 694.448 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.649 kb on + strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.650 kb on - strand, within AO353_03260 at 694.778 kb on + strand, within AO353_03260 at 694.778 kb on + strand, within AO353_03260 at 694.779 kb on - strand, within AO353_03260 at 694.779 kb on - strand, within AO353_03260 at 694.797 kb on - strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.820 kb on + strand, within AO353_03260 at 694.948 kb on - strand, within AO353_03260 at 694.948 kb on - strand, within AO353_03260 at 694.948 kb on - strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.982 kb on + strand, within AO353_03260 at 694.983 kb on - strand, within AO353_03260 at 695.057 kb on + strand at 695.057 kb on + strand at 695.057 kb on + strand at 695.057 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.067 kb on + strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.068 kb on - strand at 695.115 kb on + strand at 695.116 kb on - strand at 695.116 kb on - strand at 695.116 kb on - strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.278 kb on + strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.279 kb on - strand at 695.316 kb on - strand at 695.391 kb on + strand at 695.392 kb on - strand at 695.392 kb on - strand at 695.392 kb on - strand at 695.430 kb on - strand at 695.502 kb on + strand, within AO353_03265 at 695.502 kb on + strand, within AO353_03265 at 695.503 kb on - strand, within AO353_03265 at 695.503 kb on - strand, within AO353_03265 at 695.503 kb on - strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.570 kb on + strand, within AO353_03265 at 695.571 kb on - strand, within AO353_03265 at 695.571 kb on - strand, within AO353_03265 at 695.639 kb on + strand, within AO353_03265 at 695.696 kb on + strand, within AO353_03265 at 695.802 kb on + strand, within AO353_03265 at 695.803 kb on - strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.899 kb on + strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.900 kb on - strand, within AO353_03265 at 695.943 kb on - strand, within AO353_03265 at 696.095 kb on + strand at 696.096 kb on - strand, within AO353_03265
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 693,404 + AO353_03255 0.36 +1.0 693,404 + AO353_03255 0.36 +0.4 693,404 + AO353_03255 0.36 -0.7 693,404 + AO353_03255 0.36 +0.6 693,404 + AO353_03255 0.36 -0.1 693,404 + AO353_03255 0.36 +0.3 693,404 + AO353_03255 0.36 -1.4 693,405 - AO353_03255 0.36 +0.1 693,405 - AO353_03255 0.36 -1.7 693,405 - AO353_03255 0.36 -0.3 693,405 - AO353_03255 0.36 +0.5 693,405 - AO353_03255 0.36 +1.2 693,405 - AO353_03255 0.36 +0.6 693,405 - AO353_03255 0.36 +1.5 693,405 - AO353_03255 0.36 +1.1 693,405 - AO353_03255 0.36 +0.5 693,405 - AO353_03255 0.36 -1.1 693,405 - AO353_03255 0.36 +0.5 693,405 - AO353_03255 0.36 +1.2 693,414 - AO353_03255 0.37 +1.5 693,487 + AO353_03255 0.44 -1.8 693,488 - AO353_03255 0.44 -0.1 693,500 + AO353_03255 0.45 +1.1 693,500 + AO353_03255 0.45 -0.1 693,500 + AO353_03255 0.45 -0.2 693,500 + AO353_03255 0.45 -2.8 693,500 + AO353_03255 0.45 +0.5 693,501 - AO353_03255 0.45 +1.3 693,501 - AO353_03255 0.45 +0.3 693,501 - AO353_03255 0.45 -0.5 693,501 - AO353_03255 0.45 -0.9 693,501 - AO353_03255 0.45 -1.4 693,501 - AO353_03255 0.45 -0.1 693,501 - AO353_03255 0.45 +1.1 693,501 - AO353_03255 0.45 -0.9 693,501 - AO353_03255 0.45 +1.5 693,614 + AO353_03255 0.56 -0.1 693,614 + AO353_03255 0.56 +0.5 693,614 + AO353_03255 0.56 +0.3 693,614 + AO353_03255 0.56 +0.0 693,615 - AO353_03255 0.56 +0.1 693,615 - AO353_03255 0.56 +1.8 693,693 - AO353_03255 0.64 -1.3 693,753 + AO353_03255 0.70 -1.9 693,753 + AO353_03255 0.70 +0.1 693,754 - AO353_03255 0.70 -0.5 693,754 - AO353_03255 0.70 -1.8 693,754 - AO353_03255 0.70 +0.8 693,754 - AO353_03255 0.70 -1.6 694,027 + +0.9 694,042 - +0.3 694,057 + -0.9 694,057 + +0.0 694,058 - -1.1 694,058 - -0.1 694,058 - +1.1 694,076 + -1.3 694,076 + +0.5 694,076 + +1.8 694,076 + +0.1 694,076 + +2.3 694,076 + +1.8 694,077 - -0.9 694,077 - -1.2 694,077 - +0.7 694,077 - +0.1 694,297 + -0.1 694,297 + -0.1 694,298 - -2.1 694,298 - -0.6 694,301 + -0.1 694,301 + -1.5 694,301 + -0.5 694,302 - -1.3 694,302 - +0.8 694,302 - -0.7 694,302 - -0.0 694,302 - -0.1 694,302 - -0.7 694,302 - -1.9 694,302 - -0.2 694,302 - -0.8 694,302 - +1.0 694,302 - +0.6 694,302 - +0.5 694,329 + +0.0 694,329 + -1.9 694,329 + -2.8 694,330 - +1.9 694,330 - +0.9 694,330 - +0.1 694,386 + -1.2 694,386 + +2.1 694,386 + -0.5 694,387 - +0.8 694,387 - -2.4 694,387 - +0.5 694,448 + AO353_03260 0.10 +0.1 694,649 + AO353_03260 0.38 +0.1 694,649 + AO353_03260 0.38 -0.0 694,649 + AO353_03260 0.38 -1.2 694,649 + AO353_03260 0.38 +1.7 694,649 + AO353_03260 0.38 -0.3 694,649 + AO353_03260 0.38 +1.1 694,649 + AO353_03260 0.38 +0.3 694,649 + AO353_03260 0.38 -0.6 694,650 - AO353_03260 0.38 -0.9 694,650 - AO353_03260 0.38 +0.2 694,650 - AO353_03260 0.38 -1.0 694,650 - AO353_03260 0.38 +0.9 694,650 - AO353_03260 0.38 -1.5 694,778 + AO353_03260 0.55 +0.1 694,778 + AO353_03260 0.55 -0.3 694,779 - AO353_03260 0.55 +0.8 694,779 - AO353_03260 0.55 -0.7 694,797 - AO353_03260 0.57 +0.5 694,820 + AO353_03260 0.60 -0.5 694,820 + AO353_03260 0.60 +0.7 694,820 + AO353_03260 0.60 -0.8 694,820 + AO353_03260 0.60 -0.1 694,948 - AO353_03260 0.78 +2.2 694,948 - AO353_03260 0.78 +0.8 694,948 - AO353_03260 0.78 +0.1 694,982 + AO353_03260 0.82 -2.1 694,982 + AO353_03260 0.82 -0.8 694,982 + AO353_03260 0.82 +0.1 694,982 + AO353_03260 0.82 -1.2 694,983 - AO353_03260 0.82 +0.1 695,057 + +1.0 695,057 + -0.2 695,057 + -2.1 695,057 + +0.3 695,067 + -0.4 695,067 + +0.2 695,067 + -0.1 695,067 + +0.4 695,067 + +1.3 695,067 + +0.5 695,068 - -1.9 695,068 - +0.1 695,068 - +1.1 695,068 - +0.9 695,068 - -0.7 695,068 - +0.4 695,115 + +0.3 695,116 - -1.1 695,116 - -0.5 695,116 - -0.6 695,278 + +0.3 695,278 + +1.1 695,278 + -1.1 695,278 + -1.0 695,278 + -0.5 695,278 + -1.6 695,278 + +0.5 695,278 + -0.7 695,278 + +1.2 695,278 + +0.7 695,278 + +1.9 695,278 + +0.5 695,278 + +2.5 695,279 - -1.0 695,279 - +1.1 695,279 - +3.2 695,279 - +1.5 695,279 - +0.7 695,279 - +0.0 695,316 - +1.2 695,391 + +3.1 695,392 - +1.3 695,392 - +0.5 695,392 - -1.1 695,430 - -0.9 695,502 + AO353_03265 0.11 +1.6 695,502 + AO353_03265 0.11 -0.9 695,503 - AO353_03265 0.11 -1.7 695,503 - AO353_03265 0.11 -0.5 695,503 - AO353_03265 0.11 -0.9 695,570 + AO353_03265 0.15 +0.7 695,570 + AO353_03265 0.15 -1.8 695,570 + AO353_03265 0.15 -1.2 695,570 + AO353_03265 0.15 -1.7 695,571 - AO353_03265 0.15 +0.5 695,571 - AO353_03265 0.15 +0.3 695,639 + AO353_03265 0.19 +0.2 695,696 + AO353_03265 0.22 +1.9 695,802 + AO353_03265 0.27 -1.9 695,803 - AO353_03265 0.27 -0.0 695,899 + AO353_03265 0.32 -0.8 695,899 + AO353_03265 0.32 +0.8 695,899 + AO353_03265 0.32 +1.5 695,899 + AO353_03265 0.32 +0.9 695,900 - AO353_03265 0.32 -1.6 695,900 - AO353_03265 0.32 -0.8 695,900 - AO353_03265 0.32 +0.6 695,900 - AO353_03265 0.32 +0.5 695,943 - AO353_03265 0.34 +0.1 696,095 + +1.9 696,096 - AO353_03265 0.42 -1.5
Or see this region's nucleotide sequence