Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02375 and AO353_02380 overlap by 1 nucleotides AO353_02380 and AO353_02385 are separated by 91 nucleotides AO353_02385 and AO353_02390 are separated by 230 nucleotides
AO353_02375: AO353_02375 - septum site-determining protein MinD, at 505,192 to 506,004
_02375
AO353_02380: AO353_02380 - cell division topological specificity factor, at 506,004 to 506,258
_02380
AO353_02385: AO353_02385 - pseudouridine synthase, at 506,350 to 506,985
_02385
AO353_02390: AO353_02390 - aminopeptidase, at 507,216 to 508,505
_02390
Position (kb) 506
507 Strain fitness (log2 ratio) -2
-1
0
1
2 at 505.085 kb on + strand at 505.085 kb on + strand at 505.132 kb on + strand at 506.335 kb on + strand at 506.335 kb on + strand at 506.348 kb on + strand at 506.348 kb on + strand at 506.349 kb on - strand at 506.393 kb on + strand at 506.393 kb on + strand at 506.412 kb on + strand at 506.413 kb on - strand at 506.614 kb on + strand, within AO353_02385 at 506.615 kb on - strand, within AO353_02385 at 506.867 kb on - strand, within AO353_02385 at 506.983 kb on + strand at 506.984 kb on - strand at 506.991 kb on - strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 507.056 kb on + strand at 507.056 kb on + strand at 507.168 kb on + strand at 507.169 kb on - strand at 507.179 kb on + strand at 507.179 kb on + strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.184 kb on + strand at 507.185 kb on - strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 505,085 + -1.2 505,085 + -2.5 505,132 + -1.0 506,335 + -0.4 506,335 + -0.2 506,348 + +0.1 506,348 + +0.7 506,349 - -0.8 506,393 + -0.7 506,393 + -1.1 506,412 + -0.9 506,413 - -1.4 506,614 + AO353_02385 0.42 +0.4 506,615 - AO353_02385 0.42 -1.6 506,867 - AO353_02385 0.81 +0.6 506,983 + -1.4 506,984 - -1.9 506,991 - -1.3 506,993 + +0.4 506,993 + +0.6 506,993 + +0.1 506,993 + -0.8 506,993 + -2.1 506,993 + +0.8 506,993 + -1.4 506,993 + -0.1 506,994 - +0.1 506,994 - -0.8 506,994 - +0.4 506,994 - -0.0 506,994 - -2.1 506,994 - -1.4 506,994 - -0.7 507,056 + +0.1 507,056 + -0.2 507,168 + +0.1 507,169 - -0.3 507,179 + -0.2 507,179 + -0.6 507,180 - +0.1 507,180 - +1.1 507,180 - -0.7 507,180 - +1.4 507,180 - +0.1 507,184 + -1.1 507,185 - +0.4 507,211 + -0.2 507,211 + +2.6 507,211 + +1.6 507,211 + +2.4 507,211 + +0.8 507,211 + +0.8 507,212 - -2.6 507,212 - -0.7 507,212 - -1.7 507,215 + +2.0 507,215 + +0.6 507,215 + +1.7 507,215 + +0.6 507,215 + -0.6 507,216 - +0.2 507,216 - -1.0 507,216 - -0.2 507,216 - +2.0 507,216 - -0.3 507,216 - -1.4
Or see this region's nucleotide sequence