Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_02370

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_02365 and AO353_02370 are separated by 121 nucleotidesAO353_02370 and AO353_02375 are separated by 200 nucleotides AO353_02365: AO353_02365 - lipid A biosynthesis lauroyl acyltransferase, at 503,200 to 504,132 _02365 AO353_02370: AO353_02370 - septum formation inhibitor, at 504,254 to 504,991 _02370 AO353_02375: AO353_02375 - septum site-determining protein MinD, at 505,192 to 506,004 _02375 Position (kb) 504 505Strain fitness (log2 ratio) -2 -1 0 1 2at 504.169 kb on - strandat 504.169 kb on - strandat 504.169 kb on - strandat 504.169 kb on - strandat 504.169 kb on - strandat 504.169 kb on - strandat 504.169 kb on - strandat 504.212 kb on + strandat 504.212 kb on + strandat 504.212 kb on + strandat 504.212 kb on + strandat 504.213 kb on - strandat 504.228 kb on + strandat 504.228 kb on + strandat 504.244 kb on + strandat 504.791 kb on + strand, within AO353_02370at 504.945 kb on + strandat 505.085 kb on + strandat 505.085 kb on + strandat 505.132 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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504,169 - +0.6
504,169 - -2.1
504,169 - -0.8
504,169 - -0.7
504,169 - -0.8
504,169 - +1.0
504,169 - -0.6
504,212 + -0.2
504,212 + -0.2
504,212 + +0.3
504,212 + +0.8
504,213 - +1.4
504,228 + +0.2
504,228 + +2.1
504,244 + -0.4
504,791 + AO353_02370 0.73 +1.0
504,945 + -1.2
505,085 + -1.2
505,085 + -2.5
505,132 + -1.0

Or see this region's nucleotide sequence