Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS22180 and ABZR86_RS22185 are separated by 66 nucleotides ABZR86_RS22185 and ABZR86_RS22190 are separated by 865 nucleotides
ABZR86_RS22180: ABZR86_RS22180 - DMT family transporter, at 398,046 to 399,020
_RS22180
ABZR86_RS22185: ABZR86_RS22185 - NUDIX hydrolase, at 399,087 to 399,653
_RS22185
ABZR86_RS22190: ABZR86_RS22190 - hypothetical protein, at 400,519 to 400,878
_RS22190
Position (kb) 399
400 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 398.157 kb on + strand, within ABZR86_RS22180 at 398.158 kb on - strand, within ABZR86_RS22180 at 398.277 kb on + strand, within ABZR86_RS22180 at 398.277 kb on + strand, within ABZR86_RS22180 at 398.277 kb on + strand, within ABZR86_RS22180 at 398.278 kb on - strand, within ABZR86_RS22180 at 398.278 kb on - strand, within ABZR86_RS22180 at 398.280 kb on + strand, within ABZR86_RS22180 at 398.280 kb on + strand, within ABZR86_RS22180 at 398.280 kb on + strand, within ABZR86_RS22180 at 398.281 kb on - strand, within ABZR86_RS22180 at 398.701 kb on + strand, within ABZR86_RS22180 at 399.018 kb on + strand at 399.142 kb on - strand at 399.142 kb on - strand at 399.142 kb on - strand at 399.142 kb on - strand at 399.142 kb on - strand at 399.187 kb on - strand, within ABZR86_RS22185 at 399.268 kb on - strand, within ABZR86_RS22185 at 399.656 kb on + strand at 399.656 kb on + strand at 399.656 kb on + strand at 399.657 kb on - strand at 399.688 kb on - strand at 399.688 kb on - strand at 400.444 kb on - strand at 400.471 kb on + strand at 400.472 kb on - strand at 400.472 kb on - strand at 400.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 398,157 + ABZR86_RS22180 0.11 -0.5 398,158 - ABZR86_RS22180 0.11 +0.2 398,277 + ABZR86_RS22180 0.24 -1.0 398,277 + ABZR86_RS22180 0.24 +0.0 398,277 + ABZR86_RS22180 0.24 -0.2 398,278 - ABZR86_RS22180 0.24 +0.0 398,278 - ABZR86_RS22180 0.24 -0.1 398,280 + ABZR86_RS22180 0.24 -0.5 398,280 + ABZR86_RS22180 0.24 +0.7 398,280 + ABZR86_RS22180 0.24 -0.1 398,281 - ABZR86_RS22180 0.24 -0.4 398,701 + ABZR86_RS22180 0.67 +0.0 399,018 + -0.4 399,142 - -2.9 399,142 - -2.1 399,142 - -1.6 399,142 - +0.1 399,142 - +0.2 399,187 - ABZR86_RS22185 0.18 -0.7 399,268 - ABZR86_RS22185 0.32 +0.1 399,656 + -0.4 399,656 + +0.2 399,656 + +0.2 399,657 - +0.1 399,688 - -0.0 399,688 - -0.3 400,444 - +0.0 400,471 + -0.2 400,472 - +0.3 400,472 - -0.1 400,487 - -0.4
Or see this region's nucleotide sequence