Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21765 and ABZR86_RS21770 are separated by 68 nucleotides ABZR86_RS21770 and ABZR86_RS21775 are separated by 23 nucleotides ABZR86_RS21775 and ABZR86_RS21780 are separated by 199 nucleotides
ABZR86_RS21765: ABZR86_RS21765 - amidase, at 327,041 to 328,666
_RS21765
ABZR86_RS21770: ABZR86_RS21770 - class II 3-deoxy-7-phosphoheptulonate synthase, at 328,735 to 330,108
_RS21770
ABZR86_RS21775: ABZR86_RS21775 - disulfide bond formation protein B, at 330,132 to 330,635
_RS21775
ABZR86_RS21780: ABZR86_RS21780 - 50S ribosomal protein L17, at 330,835 to 331,218
_RS21780
Position (kb) 328
329
330
331 Strain fitness (log2 ratio) -2
-1
0
1
2 at 328.082 kb on + strand, within ABZR86_RS21765 at 328.082 kb on + strand, within ABZR86_RS21765 at 328.082 kb on + strand, within ABZR86_RS21765 at 328.082 kb on + strand, within ABZR86_RS21765 at 328.083 kb on - strand, within ABZR86_RS21765 at 328.083 kb on - strand, within ABZR86_RS21765 at 328.083 kb on - strand, within ABZR86_RS21765 at 328.099 kb on + strand, within ABZR86_RS21765 at 328.099 kb on + strand, within ABZR86_RS21765 at 328.100 kb on - strand, within ABZR86_RS21765 at 328.100 kb on - strand, within ABZR86_RS21765 at 328.109 kb on + strand, within ABZR86_RS21765 at 328.256 kb on + strand, within ABZR86_RS21765 at 328.256 kb on + strand, within ABZR86_RS21765 at 328.256 kb on + strand, within ABZR86_RS21765 at 328.256 kb on + strand, within ABZR86_RS21765 at 328.257 kb on - strand, within ABZR86_RS21765 at 328.257 kb on - strand, within ABZR86_RS21765 at 328.257 kb on - strand, within ABZR86_RS21765 at 328.556 kb on + strand at 328.557 kb on - strand at 328.563 kb on - strand at 328.563 kb on - strand at 328.563 kb on - strand at 328.606 kb on + strand at 328.607 kb on - strand at 328.672 kb on - strand at 328.672 kb on - strand at 328.672 kb on - strand at 328.679 kb on - strand at 328.679 kb on - strand at 328.736 kb on + strand at 328.737 kb on - strand at 328.799 kb on + strand at 328.799 kb on + strand at 328.800 kb on - strand at 328.800 kb on - strand at 328.800 kb on - strand at 328.830 kb on - strand at 328.978 kb on - strand, within ABZR86_RS21770 at 329.001 kb on - strand, within ABZR86_RS21770 at 329.022 kb on + strand, within ABZR86_RS21770 at 329.023 kb on - strand, within ABZR86_RS21770 at 329.252 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.367 kb on - strand, within ABZR86_RS21770 at 329.532 kb on - strand, within ABZR86_RS21770 at 329.701 kb on + strand, within ABZR86_RS21770 at 329.744 kb on + strand, within ABZR86_RS21770 at 329.821 kb on + strand, within ABZR86_RS21770 at 329.822 kb on - strand, within ABZR86_RS21770 at 330.710 kb on - strand at 330.812 kb on + strand at 330.812 kb on + strand at 330.836 kb on + strand at 330.836 kb on + strand at 330.836 kb on + strand at 330.837 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 328,082 + ABZR86_RS21765 0.64 -0.1 328,082 + ABZR86_RS21765 0.64 +0.2 328,082 + ABZR86_RS21765 0.64 +0.5 328,082 + ABZR86_RS21765 0.64 -0.2 328,083 - ABZR86_RS21765 0.64 -0.1 328,083 - ABZR86_RS21765 0.64 +1.9 328,083 - ABZR86_RS21765 0.64 +1.1 328,099 + ABZR86_RS21765 0.65 +0.2 328,099 + ABZR86_RS21765 0.65 -0.1 328,100 - ABZR86_RS21765 0.65 -1.0 328,100 - ABZR86_RS21765 0.65 +0.7 328,109 + ABZR86_RS21765 0.66 +0.2 328,256 + ABZR86_RS21765 0.75 -0.2 328,256 + ABZR86_RS21765 0.75 -0.0 328,256 + ABZR86_RS21765 0.75 +1.2 328,256 + ABZR86_RS21765 0.75 -0.1 328,257 - ABZR86_RS21765 0.75 +0.1 328,257 - ABZR86_RS21765 0.75 +0.1 328,257 - ABZR86_RS21765 0.75 -0.7 328,556 + -0.6 328,557 - -0.5 328,563 - -1.8 328,563 - -1.6 328,563 - +0.3 328,606 + -1.1 328,607 - +0.3 328,672 - +0.2 328,672 - -1.3 328,672 - +0.4 328,679 - -0.5 328,679 - -1.0 328,736 + +1.4 328,737 - -0.8 328,799 + +1.4 328,799 + +0.6 328,800 - -0.1 328,800 - +0.3 328,800 - -1.3 328,830 - -0.1 328,978 - ABZR86_RS21770 0.18 +0.4 329,001 - ABZR86_RS21770 0.19 -0.6 329,022 + ABZR86_RS21770 0.21 +0.1 329,023 - ABZR86_RS21770 0.21 -0.5 329,252 + ABZR86_RS21770 0.38 -0.1 329,366 + ABZR86_RS21770 0.46 +0.6 329,366 + ABZR86_RS21770 0.46 +0.3 329,366 + ABZR86_RS21770 0.46 -0.7 329,366 + ABZR86_RS21770 0.46 -0.5 329,367 - ABZR86_RS21770 0.46 -0.5 329,532 - ABZR86_RS21770 0.58 +0.0 329,701 + ABZR86_RS21770 0.70 -0.4 329,744 + ABZR86_RS21770 0.73 -0.9 329,821 + ABZR86_RS21770 0.79 +0.5 329,822 - ABZR86_RS21770 0.79 +0.3 330,710 - +0.1 330,812 + -1.2 330,812 + +0.2 330,836 + -0.3 330,836 + -0.6 330,836 + +0.0 330,837 - -0.2
Or see this region's nucleotide sequence