Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS21525

Experiment: perchlorate 75 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS21520 and ABZR86_RS21525 are separated by 202 nucleotidesABZR86_RS21525 and ABZR86_RS21530 are separated by 31 nucleotides ABZR86_RS21520: ABZR86_RS21520 - penicillin acylase family protein, at 269,747 to 272,167 _RS21520 ABZR86_RS21525: ABZR86_RS21525 - DUF4019 domain-containing protein, at 272,370 to 272,864 _RS21525 ABZR86_RS21530: ABZR86_RS21530 - type II toxin-antitoxin system HipA family toxin, at 272,896 to 274,206 _RS21530 Position (kb) 272 273Strain fitness (log2 ratio) -2 -1 0 1 2at 271.572 kb on - strand, within ABZR86_RS21520at 271.581 kb on + strand, within ABZR86_RS21520at 271.581 kb on + strand, within ABZR86_RS21520at 271.614 kb on + strand, within ABZR86_RS21520at 271.649 kb on + strand, within ABZR86_RS21520at 271.650 kb on - strand, within ABZR86_RS21520at 271.650 kb on - strand, within ABZR86_RS21520at 272.063 kb on + strandat 272.064 kb on - strandat 272.066 kb on + strandat 272.066 kb on + strandat 272.066 kb on + strandat 272.067 kb on - strandat 272.067 kb on - strandat 272.228 kb on + strandat 272.228 kb on + strandat 272.228 kb on + strandat 272.229 kb on - strandat 272.229 kb on - strandat 272.229 kb on - strandat 272.307 kb on + strandat 272.307 kb on + strandat 272.307 kb on + strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.308 kb on - strandat 272.369 kb on + strandat 272.369 kb on + strandat 272.369 kb on + strandat 272.369 kb on + strandat 272.369 kb on + strandat 272.369 kb on + strandat 272.369 kb on + strandat 272.370 kb on - strandat 272.370 kb on - strandat 272.370 kb on - strandat 272.586 kb on + strand, within ABZR86_RS21525at 272.587 kb on - strand, within ABZR86_RS21525at 272.587 kb on - strand, within ABZR86_RS21525at 272.587 kb on - strand, within ABZR86_RS21525at 272.782 kb on - strand, within ABZR86_RS21525at 272.782 kb on - strand, within ABZR86_RS21525at 272.782 kb on - strand, within ABZR86_RS21525at 272.782 kb on - strand, within ABZR86_RS21525at 273.227 kb on + strand, within ABZR86_RS21530at 273.227 kb on + strand, within ABZR86_RS21530at 273.228 kb on - strand, within ABZR86_RS21530at 273.480 kb on + strand, within ABZR86_RS21530at 273.480 kb on + strand, within ABZR86_RS21530at 273.480 kb on + strand, within ABZR86_RS21530at 273.480 kb on + strand, within ABZR86_RS21530at 273.481 kb on - strand, within ABZR86_RS21530at 273.481 kb on - strand, within ABZR86_RS21530at 273.481 kb on - strand, within ABZR86_RS21530at 273.481 kb on - strand, within ABZR86_RS21530at 273.481 kb on - strand, within ABZR86_RS21530at 273.481 kb on - strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.483 kb on + strand, within ABZR86_RS21530at 273.484 kb on - strand, within ABZR86_RS21530at 273.484 kb on - strand, within ABZR86_RS21530at 273.625 kb on - strand, within ABZR86_RS21530at 273.625 kb on - strand, within ABZR86_RS21530at 273.625 kb on - strand, within ABZR86_RS21530at 273.625 kb on - strand, within ABZR86_RS21530

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Per-strain Table

Position Strand Gene LocusTag Fraction perchlorate 75 mM
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271,572 - ABZR86_RS21520 0.75 +0.2
271,581 + ABZR86_RS21520 0.76 -1.1
271,581 + ABZR86_RS21520 0.76 -1.5
271,614 + ABZR86_RS21520 0.77 +1.1
271,649 + ABZR86_RS21520 0.79 +0.0
271,650 - ABZR86_RS21520 0.79 +0.1
271,650 - ABZR86_RS21520 0.79 -0.1
272,063 + -1.2
272,064 - -0.6
272,066 + -0.1
272,066 + +1.4
272,066 + -0.3
272,067 - -0.3
272,067 - +0.6
272,228 + -0.1
272,228 + -0.6
272,228 + -0.6
272,229 - -0.8
272,229 - -2.2
272,229 - +0.0
272,307 + +0.2
272,307 + +0.2
272,307 + +0.7
272,308 - -0.1
272,308 - +0.4
272,308 - +0.5
272,308 - +1.3
272,308 - +1.0
272,308 - +0.3
272,308 - -0.6
272,308 - +0.4
272,308 - -0.0
272,369 + -1.6
272,369 + +0.4
272,369 + +0.9
272,369 + +0.1
272,369 + -0.3
272,369 + -0.2
272,369 + -0.5
272,370 - -0.2
272,370 - +0.5
272,370 - -1.2
272,586 + ABZR86_RS21525 0.44 -1.6
272,587 - ABZR86_RS21525 0.44 +0.4
272,587 - ABZR86_RS21525 0.44 -0.3
272,587 - ABZR86_RS21525 0.44 -0.9
272,782 - ABZR86_RS21525 0.83 -0.8
272,782 - ABZR86_RS21525 0.83 +0.3
272,782 - ABZR86_RS21525 0.83 +0.7
272,782 - ABZR86_RS21525 0.83 +2.0
273,227 + ABZR86_RS21530 0.25 +0.2
273,227 + ABZR86_RS21530 0.25 -1.2
273,228 - ABZR86_RS21530 0.25 -0.5
273,480 + ABZR86_RS21530 0.45 -0.5
273,480 + ABZR86_RS21530 0.45 -0.4
273,480 + ABZR86_RS21530 0.45 +0.3
273,480 + ABZR86_RS21530 0.45 +0.2
273,481 - ABZR86_RS21530 0.45 -0.3
273,481 - ABZR86_RS21530 0.45 +0.7
273,481 - ABZR86_RS21530 0.45 +0.1
273,481 - ABZR86_RS21530 0.45 -0.2
273,481 - ABZR86_RS21530 0.45 -0.8
273,481 - ABZR86_RS21530 0.45 -0.4
273,483 + ABZR86_RS21530 0.45 -0.3
273,483 + ABZR86_RS21530 0.45 -0.1
273,483 + ABZR86_RS21530 0.45 +0.1
273,483 + ABZR86_RS21530 0.45 +0.4
273,483 + ABZR86_RS21530 0.45 +0.2
273,483 + ABZR86_RS21530 0.45 +0.6
273,483 + ABZR86_RS21530 0.45 +0.2
273,483 + ABZR86_RS21530 0.45 +0.7
273,484 - ABZR86_RS21530 0.45 +0.2
273,484 - ABZR86_RS21530 0.45 +0.0
273,625 - ABZR86_RS21530 0.56 -0.3
273,625 - ABZR86_RS21530 0.56 -1.3
273,625 - ABZR86_RS21530 0.56 -0.2
273,625 - ABZR86_RS21530 0.56 +0.4

Or see this region's nucleotide sequence