Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21340 and ABZR86_RS21345 are separated by 229 nucleotides ABZR86_RS21345 and ABZR86_RS21350 overlap by 4 nucleotides ABZR86_RS21350 and ABZR86_RS21355 are separated by 81 nucleotides ABZR86_RS21355 and ABZR86_RS21360 are separated by 5 nucleotides
ABZR86_RS21340: ABZR86_RS21340 - sensor histidine kinase, at 234,892 to 236,121
_RS21340
ABZR86_RS21345: ABZR86_RS21345 - GNAT family N-acetyltransferase, at 236,351 to 236,968
_RS21345
ABZR86_RS21350: ABZR86_RS21350 - septum site-determining protein MinC, at 236,965 to 237,747
_RS21350
ABZR86_RS21355: ABZR86_RS21355 - septum site-determining protein MinD, at 237,829 to 238,644
_RS21355
ABZR86_RS21360: ABZR86_RS21360 - cell division topological specificity factor MinE, at 238,650 to 238,934
_RS21360
Position (kb) 236
237
238 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 235.986 kb on + strand, within ABZR86_RS21340 at 235.986 kb on + strand, within ABZR86_RS21340 at 235.987 kb on - strand, within ABZR86_RS21340 at 236.063 kb on + strand at 236.063 kb on + strand at 236.063 kb on + strand at 236.063 kb on + strand at 236.063 kb on + strand at 236.063 kb on + strand at 236.063 kb on + strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.064 kb on - strand at 236.211 kb on + strand at 236.212 kb on - strand at 236.222 kb on + strand at 236.223 kb on - strand at 236.223 kb on - strand at 236.239 kb on + strand at 236.239 kb on + strand at 236.239 kb on + strand at 236.239 kb on + strand at 236.239 kb on + strand at 236.240 kb on - strand at 236.240 kb on - strand at 236.240 kb on - strand at 236.265 kb on + strand at 236.265 kb on + strand at 236.265 kb on + strand at 236.265 kb on + strand at 236.266 kb on - strand at 236.266 kb on - strand at 236.335 kb on + strand at 236.335 kb on + strand at 236.335 kb on + strand at 236.335 kb on + strand at 236.336 kb on + strand at 236.336 kb on - strand at 236.336 kb on - strand at 236.336 kb on - strand at 236.336 kb on - strand at 236.459 kb on + strand, within ABZR86_RS21345 at 236.459 kb on + strand, within ABZR86_RS21345 at 236.460 kb on - strand, within ABZR86_RS21345 at 236.460 kb on - strand, within ABZR86_RS21345 at 236.465 kb on + strand, within ABZR86_RS21345 at 236.465 kb on + strand, within ABZR86_RS21345 at 236.465 kb on + strand, within ABZR86_RS21345 at 236.466 kb on - strand, within ABZR86_RS21345 at 236.564 kb on + strand, within ABZR86_RS21345 at 236.564 kb on + strand, within ABZR86_RS21345 at 236.564 kb on + strand, within ABZR86_RS21345 at 236.564 kb on + strand, within ABZR86_RS21345 at 236.565 kb on - strand, within ABZR86_RS21345 at 236.565 kb on - strand, within ABZR86_RS21345 at 236.565 kb on - strand, within ABZR86_RS21345 at 236.585 kb on + strand, within ABZR86_RS21345 at 236.585 kb on + strand, within ABZR86_RS21345 at 236.585 kb on + strand, within ABZR86_RS21345 at 236.586 kb on - strand, within ABZR86_RS21345 at 236.600 kb on + strand, within ABZR86_RS21345 at 236.600 kb on + strand, within ABZR86_RS21345 at 236.600 kb on + strand, within ABZR86_RS21345 at 236.601 kb on - strand, within ABZR86_RS21345 at 236.660 kb on + strand, within ABZR86_RS21345 at 236.660 kb on + strand, within ABZR86_RS21345 at 236.660 kb on + strand, within ABZR86_RS21345 at 236.660 kb on + strand, within ABZR86_RS21345 at 236.661 kb on - strand, within ABZR86_RS21345 at 236.661 kb on - strand, within ABZR86_RS21345 at 236.661 kb on - strand, within ABZR86_RS21345 at 236.678 kb on + strand, within ABZR86_RS21345 at 236.679 kb on - strand, within ABZR86_RS21345 at 236.679 kb on - strand, within ABZR86_RS21345 at 236.679 kb on - strand, within ABZR86_RS21345 at 236.679 kb on - strand, within ABZR86_RS21345 at 236.762 kb on + strand, within ABZR86_RS21345 at 236.762 kb on + strand, within ABZR86_RS21345 at 236.763 kb on - strand, within ABZR86_RS21345 at 236.843 kb on + strand, within ABZR86_RS21345 at 236.844 kb on - strand, within ABZR86_RS21345 at 236.844 kb on - strand, within ABZR86_RS21345 at 236.849 kb on + strand, within ABZR86_RS21345 at 236.850 kb on - strand, within ABZR86_RS21345 at 236.850 kb on - strand, within ABZR86_RS21345 at 236.850 kb on - strand, within ABZR86_RS21345 at 236.850 kb on - strand, within ABZR86_RS21345 at 236.850 kb on - strand, within ABZR86_RS21345 at 236.850 kb on - strand, within ABZR86_RS21345 at 236.864 kb on + strand, within ABZR86_RS21345 at 236.864 kb on + strand, within ABZR86_RS21345 at 236.864 kb on + strand, within ABZR86_RS21345 at 236.864 kb on + strand, within ABZR86_RS21345 at 236.864 kb on + strand, within ABZR86_RS21345 at 236.865 kb on - strand, within ABZR86_RS21345 at 236.926 kb on + strand at 236.926 kb on + strand at 236.982 kb on + strand at 236.983 kb on - strand at 237.065 kb on - strand, within ABZR86_RS21350 at 237.469 kb on + strand, within ABZR86_RS21350 at 237.469 kb on + strand, within ABZR86_RS21350 at 237.469 kb on + strand, within ABZR86_RS21350 at 237.469 kb on + strand, within ABZR86_RS21350 at 237.550 kb on + strand, within ABZR86_RS21350 at 237.551 kb on - strand, within ABZR86_RS21350 at 237.551 kb on - strand, within ABZR86_RS21350 at 237.610 kb on + strand, within ABZR86_RS21350 at 237.610 kb on + strand, within ABZR86_RS21350 at 237.610 kb on + strand, within ABZR86_RS21350 at 237.610 kb on + strand, within ABZR86_RS21350 at 237.611 kb on - strand, within ABZR86_RS21350 at 237.611 kb on - strand, within ABZR86_RS21350 at 237.611 kb on - strand, within ABZR86_RS21350 at 237.611 kb on - strand, within ABZR86_RS21350 at 237.611 kb on - strand, within ABZR86_RS21350 at 237.611 kb on - strand, within ABZR86_RS21350 at 237.781 kb on + strand at 237.781 kb on + strand at 237.782 kb on - strand at 237.782 kb on - strand at 237.784 kb on + strand at 237.799 kb on + strand at 237.799 kb on + strand at 237.800 kb on - strand at 237.810 kb on + strand at 237.810 kb on + strand at 237.810 kb on + strand at 238.003 kb on + strand, within ABZR86_RS21355 at 238.081 kb on + strand, within ABZR86_RS21355 at 238.081 kb on + strand, within ABZR86_RS21355 at 238.082 kb on - strand, within ABZR86_RS21355 at 238.082 kb on - strand, within ABZR86_RS21355 at 238.232 kb on - strand, within ABZR86_RS21355 at 238.232 kb on - strand, within ABZR86_RS21355 at 238.232 kb on - strand, within ABZR86_RS21355 at 238.546 kb on + strand, within ABZR86_RS21355 at 238.546 kb on + strand, within ABZR86_RS21355 at 238.631 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 235,986 + ABZR86_RS21340 0.89 -2.5 235,986 + ABZR86_RS21340 0.89 -2.1 235,987 - ABZR86_RS21340 0.89 -1.3 236,063 + -3.1 236,063 + -2.0 236,063 + -1.2 236,063 + -3.4 236,063 + -2.4 236,063 + -1.9 236,063 + -1.0 236,064 - -1.3 236,064 - -0.7 236,064 - -1.1 236,064 - -2.0 236,064 - -1.3 236,064 - +0.0 236,064 - -1.0 236,064 - -1.4 236,064 - -1.2 236,064 - -0.1 236,064 - -0.4 236,064 - +0.2 236,064 - -0.8 236,064 - -1.8 236,064 - -0.8 236,064 - -0.3 236,211 + +0.8 236,212 - +0.1 236,222 + +0.0 236,223 - +0.3 236,223 - -0.6 236,239 + -0.8 236,239 + -0.9 236,239 + -0.6 236,239 + +0.4 236,239 + -0.5 236,240 - +0.8 236,240 - +0.6 236,240 - -0.2 236,265 + -0.8 236,265 + +0.2 236,265 + -0.4 236,265 + -0.0 236,266 - -1.2 236,266 - -3.5 236,335 + -0.4 236,335 + -0.4 236,335 + -1.2 236,335 + -0.6 236,336 + -0.4 236,336 - -2.0 236,336 - -2.0 236,336 - -0.5 236,336 - -1.7 236,459 + ABZR86_RS21345 0.17 -2.6 236,459 + ABZR86_RS21345 0.17 -1.2 236,460 - ABZR86_RS21345 0.18 -1.3 236,460 - ABZR86_RS21345 0.18 -0.5 236,465 + ABZR86_RS21345 0.18 -2.0 236,465 + ABZR86_RS21345 0.18 -3.7 236,465 + ABZR86_RS21345 0.18 -2.7 236,466 - ABZR86_RS21345 0.19 -2.4 236,564 + ABZR86_RS21345 0.34 -2.4 236,564 + ABZR86_RS21345 0.34 -3.1 236,564 + ABZR86_RS21345 0.34 -3.5 236,564 + ABZR86_RS21345 0.34 -0.5 236,565 - ABZR86_RS21345 0.35 -1.4 236,565 - ABZR86_RS21345 0.35 -3.1 236,565 - ABZR86_RS21345 0.35 -4.7 236,585 + ABZR86_RS21345 0.38 -1.8 236,585 + ABZR86_RS21345 0.38 -1.1 236,585 + ABZR86_RS21345 0.38 +0.0 236,586 - ABZR86_RS21345 0.38 -4.3 236,600 + ABZR86_RS21345 0.40 -2.0 236,600 + ABZR86_RS21345 0.40 -1.6 236,600 + ABZR86_RS21345 0.40 -1.6 236,601 - ABZR86_RS21345 0.40 -2.5 236,660 + ABZR86_RS21345 0.50 -0.7 236,660 + ABZR86_RS21345 0.50 -1.7 236,660 + ABZR86_RS21345 0.50 -1.5 236,660 + ABZR86_RS21345 0.50 -0.6 236,661 - ABZR86_RS21345 0.50 -3.3 236,661 - ABZR86_RS21345 0.50 -2.9 236,661 - ABZR86_RS21345 0.50 -1.2 236,678 + ABZR86_RS21345 0.53 -2.0 236,679 - ABZR86_RS21345 0.53 -3.8 236,679 - ABZR86_RS21345 0.53 -1.5 236,679 - ABZR86_RS21345 0.53 -2.3 236,679 - ABZR86_RS21345 0.53 -3.4 236,762 + ABZR86_RS21345 0.67 -1.1 236,762 + ABZR86_RS21345 0.67 -1.6 236,763 - ABZR86_RS21345 0.67 -2.3 236,843 + ABZR86_RS21345 0.80 -1.7 236,844 - ABZR86_RS21345 0.80 -0.9 236,844 - ABZR86_RS21345 0.80 -4.1 236,849 + ABZR86_RS21345 0.81 -2.1 236,850 - ABZR86_RS21345 0.81 -3.0 236,850 - ABZR86_RS21345 0.81 -3.6 236,850 - ABZR86_RS21345 0.81 -1.7 236,850 - ABZR86_RS21345 0.81 -1.8 236,850 - ABZR86_RS21345 0.81 -1.9 236,850 - ABZR86_RS21345 0.81 -2.1 236,864 + ABZR86_RS21345 0.83 -1.3 236,864 + ABZR86_RS21345 0.83 -1.6 236,864 + ABZR86_RS21345 0.83 -1.8 236,864 + ABZR86_RS21345 0.83 -0.4 236,864 + ABZR86_RS21345 0.83 -2.3 236,865 - ABZR86_RS21345 0.83 -2.6 236,926 + -0.4 236,926 + -1.0 236,982 + -0.9 236,983 - -0.7 237,065 - ABZR86_RS21350 0.13 -3.0 237,469 + ABZR86_RS21350 0.64 -2.8 237,469 + ABZR86_RS21350 0.64 -0.3 237,469 + ABZR86_RS21350 0.64 -0.8 237,469 + ABZR86_RS21350 0.64 -0.6 237,550 + ABZR86_RS21350 0.75 +1.0 237,551 - ABZR86_RS21350 0.75 -2.0 237,551 - ABZR86_RS21350 0.75 -2.3 237,610 + ABZR86_RS21350 0.82 -2.8 237,610 + ABZR86_RS21350 0.82 -1.9 237,610 + ABZR86_RS21350 0.82 -0.7 237,610 + ABZR86_RS21350 0.82 -0.8 237,611 - ABZR86_RS21350 0.83 -3.5 237,611 - ABZR86_RS21350 0.83 -0.5 237,611 - ABZR86_RS21350 0.83 -1.9 237,611 - ABZR86_RS21350 0.83 -0.6 237,611 - ABZR86_RS21350 0.83 -1.2 237,611 - ABZR86_RS21350 0.83 -0.8 237,781 + -2.7 237,781 + -2.1 237,782 - -1.2 237,782 - -3.0 237,784 + -2.4 237,799 + +0.5 237,799 + -1.0 237,800 - -0.6 237,810 + +1.2 237,810 + -1.1 237,810 + -0.4 238,003 + ABZR86_RS21355 0.21 -2.9 238,081 + ABZR86_RS21355 0.31 -2.9 238,081 + ABZR86_RS21355 0.31 -1.4 238,082 - ABZR86_RS21355 0.31 -2.5 238,082 - ABZR86_RS21355 0.31 -3.5 238,232 - ABZR86_RS21355 0.49 -3.0 238,232 - ABZR86_RS21355 0.49 -1.4 238,232 - ABZR86_RS21355 0.49 -0.7 238,546 + ABZR86_RS21355 0.88 -0.7 238,546 + ABZR86_RS21355 0.88 -1.7 238,631 + +0.1
Or see this region's nucleotide sequence