Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20360 and ABZR86_RS20365 overlap by 4 nucleotides ABZR86_RS20365 and ABZR86_RS20370 are separated by 88 nucleotides ABZR86_RS20370 and ABZR86_RS20375 are separated by 20 nucleotides
ABZR86_RS20360: ABZR86_RS20360 - ATP-binding protein, at 9,422 to 10,579
_RS20360
ABZR86_RS20365: ABZR86_RS20365 - response regulator transcription factor, at 10,576 to 11,238
_RS20365
ABZR86_RS20370: ABZR86_RS20370 - alpha/beta hydrolase, at 11,327 to 12,127
_RS20370
ABZR86_RS20375: ABZR86_RS20375 - nitrilase-related carbon-nitrogen hydrolase, at 12,148 to 13,575
_RS20375
Position (kb) 10
11
12 Strain fitness (log2 ratio) -2
-1
0
1 at 9.743 kb on + strand, within ABZR86_RS20360 at 9.744 kb on - strand, within ABZR86_RS20360 at 10.599 kb on - strand at 10.599 kb on - strand at 10.674 kb on + strand, within ABZR86_RS20365 at 10.675 kb on - strand, within ABZR86_RS20365 at 10.675 kb on - strand, within ABZR86_RS20365 at 10.703 kb on + strand, within ABZR86_RS20365 at 10.703 kb on + strand, within ABZR86_RS20365 at 10.703 kb on + strand, within ABZR86_RS20365 at 10.703 kb on + strand, within ABZR86_RS20365 at 10.704 kb on - strand, within ABZR86_RS20365 at 10.707 kb on + strand, within ABZR86_RS20365 at 10.707 kb on + strand, within ABZR86_RS20365 at 10.708 kb on - strand, within ABZR86_RS20365 at 10.708 kb on - strand, within ABZR86_RS20365 at 10.708 kb on - strand, within ABZR86_RS20365 at 11.031 kb on - strand, within ABZR86_RS20365 at 11.104 kb on - strand, within ABZR86_RS20365 at 11.106 kb on - strand, within ABZR86_RS20365 at 11.106 kb on - strand, within ABZR86_RS20365 at 11.234 kb on + strand at 11.234 kb on + strand at 11.625 kb on + strand, within ABZR86_RS20370 at 11.626 kb on - strand, within ABZR86_RS20370 at 11.931 kb on + strand, within ABZR86_RS20370
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 9,743 + ABZR86_RS20360 0.28 -1.4 9,744 - ABZR86_RS20360 0.28 -2.4 10,599 - -0.3 10,599 - -0.9 10,674 + ABZR86_RS20365 0.15 +0.7 10,675 - ABZR86_RS20365 0.15 +0.7 10,675 - ABZR86_RS20365 0.15 +0.1 10,703 + ABZR86_RS20365 0.19 -0.3 10,703 + ABZR86_RS20365 0.19 +0.7 10,703 + ABZR86_RS20365 0.19 -1.4 10,703 + ABZR86_RS20365 0.19 -1.4 10,704 - ABZR86_RS20365 0.19 +0.4 10,707 + ABZR86_RS20365 0.20 +0.7 10,707 + ABZR86_RS20365 0.20 +0.7 10,708 - ABZR86_RS20365 0.20 -0.8 10,708 - ABZR86_RS20365 0.20 -0.3 10,708 - ABZR86_RS20365 0.20 -0.2 11,031 - ABZR86_RS20365 0.69 +0.1 11,104 - ABZR86_RS20365 0.80 +0.4 11,106 - ABZR86_RS20365 0.80 -0.0 11,106 - ABZR86_RS20365 0.80 -1.4 11,234 + -0.5 11,234 + -1.1 11,625 + ABZR86_RS20370 0.37 +0.6 11,626 - ABZR86_RS20370 0.37 +1.2 11,931 + ABZR86_RS20370 0.75 +0.3
Or see this region's nucleotide sequence