Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19125 and ABZR86_RS19130 are separated by 183 nucleotides ABZR86_RS19130 and ABZR86_RS19135 are separated by 101 nucleotides ABZR86_RS19135 and ABZR86_RS19140 are separated by 147 nucleotides
ABZR86_RS19125: ABZR86_RS19125 - ATP-binding protein, at 269,357 to 270,634
_RS19125
ABZR86_RS19130: ABZR86_RS19130 - outer membrane beta-barrel protein, at 270,818 to 271,510
_RS19130
ABZR86_RS19135: ABZR86_RS19135 - hypothetical protein, at 271,612 to 271,872
_RS19135
ABZR86_RS19140: ABZR86_RS19140 - outer membrane beta-barrel protein, at 272,020 to 272,745
_RS19140
Position (kb) 270
271
272 Strain fitness (log2 ratio) -1
0
1
2 at 269.828 kb on + strand, within ABZR86_RS19125 at 269.829 kb on - strand, within ABZR86_RS19125 at 269.829 kb on - strand, within ABZR86_RS19125 at 269.829 kb on - strand, within ABZR86_RS19125 at 269.870 kb on + strand, within ABZR86_RS19125 at 269.904 kb on + strand, within ABZR86_RS19125 at 269.905 kb on - strand, within ABZR86_RS19125 at 269.956 kb on + strand, within ABZR86_RS19125 at 269.957 kb on - strand, within ABZR86_RS19125 at 270.036 kb on + strand, within ABZR86_RS19125 at 270.037 kb on - strand, within ABZR86_RS19125 at 270.037 kb on - strand, within ABZR86_RS19125 at 270.041 kb on - strand, within ABZR86_RS19125 at 270.113 kb on + strand, within ABZR86_RS19125 at 270.136 kb on + strand, within ABZR86_RS19125 at 270.176 kb on + strand, within ABZR86_RS19125 at 270.177 kb on - strand, within ABZR86_RS19125 at 270.215 kb on + strand, within ABZR86_RS19125 at 270.241 kb on + strand, within ABZR86_RS19125 at 270.241 kb on + strand, within ABZR86_RS19125 at 270.482 kb on + strand, within ABZR86_RS19125 at 270.482 kb on + strand, within ABZR86_RS19125 at 270.482 kb on + strand, within ABZR86_RS19125 at 270.482 kb on + strand, within ABZR86_RS19125 at 270.483 kb on - strand, within ABZR86_RS19125 at 270.483 kb on - strand, within ABZR86_RS19125 at 270.483 kb on - strand, within ABZR86_RS19125 at 270.483 kb on - strand, within ABZR86_RS19125 at 270.582 kb on + strand at 270.583 kb on - strand at 270.693 kb on + strand at 270.703 kb on + strand at 270.729 kb on + strand at 270.791 kb on - strand at 270.832 kb on + strand at 270.832 kb on + strand at 270.927 kb on - strand, within ABZR86_RS19130 at 271.177 kb on - strand, within ABZR86_RS19130 at 271.177 kb on - strand, within ABZR86_RS19130 at 271.177 kb on - strand, within ABZR86_RS19130 at 271.220 kb on + strand, within ABZR86_RS19130 at 271.221 kb on - strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.241 kb on + strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.242 kb on - strand, within ABZR86_RS19130 at 271.333 kb on + strand, within ABZR86_RS19130 at 271.333 kb on + strand, within ABZR86_RS19130 at 271.334 kb on - strand, within ABZR86_RS19130 at 271.334 kb on - strand, within ABZR86_RS19130 at 271.334 kb on - strand, within ABZR86_RS19130 at 271.336 kb on + strand, within ABZR86_RS19130 at 271.337 kb on - strand, within ABZR86_RS19130 at 271.337 kb on - strand, within ABZR86_RS19130 at 271.370 kb on + strand, within ABZR86_RS19130 at 271.384 kb on + strand, within ABZR86_RS19130 at 271.385 kb on - strand, within ABZR86_RS19130 at 271.465 kb on - strand at 271.496 kb on + strand at 271.508 kb on + strand at 271.508 kb on + strand at 271.509 kb on - strand at 271.509 kb on - strand at 271.516 kb on + strand at 271.516 kb on + strand at 271.517 kb on - strand at 271.728 kb on - strand, within ABZR86_RS19135 at 271.878 kb on + strand at 271.878 kb on + strand at 271.900 kb on + strand at 271.924 kb on - strand at 272.103 kb on - strand, within ABZR86_RS19140 at 272.128 kb on + strand, within ABZR86_RS19140 at 272.128 kb on + strand, within ABZR86_RS19140 at 272.128 kb on + strand, within ABZR86_RS19140 at 272.129 kb on - strand, within ABZR86_RS19140 at 272.129 kb on - strand, within ABZR86_RS19140 at 272.161 kb on + strand, within ABZR86_RS19140 at 272.287 kb on + strand, within ABZR86_RS19140 at 272.425 kb on + strand, within ABZR86_RS19140 at 272.446 kb on + strand, within ABZR86_RS19140 at 272.446 kb on + strand, within ABZR86_RS19140
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 269,828 + ABZR86_RS19125 0.37 +0.7 269,829 - ABZR86_RS19125 0.37 -0.5 269,829 - ABZR86_RS19125 0.37 -0.0 269,829 - ABZR86_RS19125 0.37 -0.2 269,870 + ABZR86_RS19125 0.40 -1.0 269,904 + ABZR86_RS19125 0.43 -0.5 269,905 - ABZR86_RS19125 0.43 -0.4 269,956 + ABZR86_RS19125 0.47 -0.4 269,957 - ABZR86_RS19125 0.47 -1.5 270,036 + ABZR86_RS19125 0.53 -1.1 270,037 - ABZR86_RS19125 0.53 -0.0 270,037 - ABZR86_RS19125 0.53 -0.3 270,041 - ABZR86_RS19125 0.54 +0.2 270,113 + ABZR86_RS19125 0.59 +0.2 270,136 + ABZR86_RS19125 0.61 -0.6 270,176 + ABZR86_RS19125 0.64 +0.1 270,177 - ABZR86_RS19125 0.64 +0.5 270,215 + ABZR86_RS19125 0.67 -0.0 270,241 + ABZR86_RS19125 0.69 +0.2 270,241 + ABZR86_RS19125 0.69 +0.4 270,482 + ABZR86_RS19125 0.88 -1.1 270,482 + ABZR86_RS19125 0.88 -0.0 270,482 + ABZR86_RS19125 0.88 -0.1 270,482 + ABZR86_RS19125 0.88 +0.1 270,483 - ABZR86_RS19125 0.88 +1.2 270,483 - ABZR86_RS19125 0.88 -1.3 270,483 - ABZR86_RS19125 0.88 -0.2 270,483 - ABZR86_RS19125 0.88 -0.4 270,582 + -1.3 270,583 - -0.2 270,693 + +0.5 270,703 + +0.6 270,729 + -0.2 270,791 - +0.4 270,832 + +0.7 270,832 + -0.8 270,927 - ABZR86_RS19130 0.16 +0.1 271,177 - ABZR86_RS19130 0.52 -0.2 271,177 - ABZR86_RS19130 0.52 +0.4 271,177 - ABZR86_RS19130 0.52 +1.9 271,220 + ABZR86_RS19130 0.58 +0.1 271,221 - ABZR86_RS19130 0.58 +0.5 271,241 + ABZR86_RS19130 0.61 -0.0 271,241 + ABZR86_RS19130 0.61 +0.4 271,241 + ABZR86_RS19130 0.61 +0.2 271,241 + ABZR86_RS19130 0.61 -0.2 271,241 + ABZR86_RS19130 0.61 -0.1 271,241 + ABZR86_RS19130 0.61 +0.2 271,241 + ABZR86_RS19130 0.61 +0.1 271,241 + ABZR86_RS19130 0.61 -0.0 271,242 - ABZR86_RS19130 0.61 -0.5 271,242 - ABZR86_RS19130 0.61 +0.2 271,242 - ABZR86_RS19130 0.61 -0.6 271,242 - ABZR86_RS19130 0.61 -1.1 271,242 - ABZR86_RS19130 0.61 +1.3 271,242 - ABZR86_RS19130 0.61 -0.2 271,242 - ABZR86_RS19130 0.61 +0.7 271,242 - ABZR86_RS19130 0.61 -0.0 271,242 - ABZR86_RS19130 0.61 +0.2 271,242 - ABZR86_RS19130 0.61 +0.5 271,242 - ABZR86_RS19130 0.61 +0.9 271,242 - ABZR86_RS19130 0.61 -0.6 271,333 + ABZR86_RS19130 0.74 +0.7 271,333 + ABZR86_RS19130 0.74 +0.9 271,334 - ABZR86_RS19130 0.74 -0.1 271,334 - ABZR86_RS19130 0.74 -0.7 271,334 - ABZR86_RS19130 0.74 -0.7 271,336 + ABZR86_RS19130 0.75 +0.5 271,337 - ABZR86_RS19130 0.75 +0.2 271,337 - ABZR86_RS19130 0.75 +1.4 271,370 + ABZR86_RS19130 0.80 -0.2 271,384 + ABZR86_RS19130 0.82 +1.5 271,385 - ABZR86_RS19130 0.82 -0.1 271,465 - +0.0 271,496 + -0.1 271,508 + -0.1 271,508 + +0.2 271,509 - -0.2 271,509 - -0.3 271,516 + +0.4 271,516 + -0.1 271,517 - +1.0 271,728 - ABZR86_RS19135 0.44 -0.3 271,878 + -0.2 271,878 + -1.3 271,900 + +0.2 271,924 - -1.0 272,103 - ABZR86_RS19140 0.11 -0.8 272,128 + ABZR86_RS19140 0.15 -0.6 272,128 + ABZR86_RS19140 0.15 -0.1 272,128 + ABZR86_RS19140 0.15 -0.2 272,129 - ABZR86_RS19140 0.15 -0.4 272,129 - ABZR86_RS19140 0.15 +0.1 272,161 + ABZR86_RS19140 0.19 -0.1 272,287 + ABZR86_RS19140 0.37 -0.1 272,425 + ABZR86_RS19140 0.56 -0.5 272,446 + ABZR86_RS19140 0.59 +0.5 272,446 + ABZR86_RS19140 0.59 -0.9
Or see this region's nucleotide sequence