Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18390 and ABZR86_RS18395 are separated by 56 nucleotides ABZR86_RS18395 and ABZR86_RS18400 are separated by 250 nucleotides ABZR86_RS18400 and ABZR86_RS18405 are separated by 73 nucleotides
ABZR86_RS18390: ABZR86_RS18390 - SPOR domain-containing protein, at 98,272 to 99,033
_RS18390
ABZR86_RS18395: ABZR86_RS18395 - tRNA-Thr, at 99,090 to 99,165
_RS18395
ABZR86_RS18400: ABZR86_RS18400 - sensor domain-containing diguanylate cyclase, at 99,416 to 101,578
_RS18400
ABZR86_RS18405: ABZR86_RS18405 - patatin-like phospholipase family protein, at 101,652 to 102,617
_RS18405
Position (kb) 99
100
101
102 Strain fitness (log2 ratio) -2
-1
0
1
2 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.578 kb on + strand, within ABZR86_RS18390 at 98.579 kb on - strand, within ABZR86_RS18390 at 98.579 kb on - strand, within ABZR86_RS18390 at 98.579 kb on - strand, within ABZR86_RS18390 at 98.710 kb on + strand, within ABZR86_RS18390 at 98.710 kb on + strand, within ABZR86_RS18390 at 98.711 kb on - strand, within ABZR86_RS18390 at 98.711 kb on - strand, within ABZR86_RS18390 at 98.785 kb on + strand, within ABZR86_RS18390 at 98.785 kb on + strand, within ABZR86_RS18390 at 98.786 kb on - strand, within ABZR86_RS18390 at 98.786 kb on - strand, within ABZR86_RS18390 at 98.786 kb on - strand, within ABZR86_RS18390 at 98.932 kb on + strand, within ABZR86_RS18390 at 98.933 kb on - strand, within ABZR86_RS18390 at 98.933 kb on - strand, within ABZR86_RS18390 at 99.071 kb on + strand at 99.071 kb on + strand at 99.071 kb on + strand at 99.071 kb on + strand at 99.072 kb on - strand at 99.072 kb on - strand at 99.325 kb on + strand at 99.326 kb on - strand at 99.326 kb on - strand at 99.366 kb on + strand at 99.366 kb on + strand at 99.366 kb on + strand at 99.366 kb on + strand at 99.366 kb on + strand at 99.366 kb on + strand at 99.367 kb on - strand at 99.367 kb on - strand at 99.367 kb on - strand at 99.367 kb on - strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.368 kb on + strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.370 kb on + strand at 99.370 kb on + strand at 99.370 kb on + strand at 99.370 kb on + strand at 99.370 kb on + strand at 99.370 kb on + strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.371 kb on - strand at 99.429 kb on + strand at 99.429 kb on + strand at 99.430 kb on - strand at 99.504 kb on - strand at 99.504 kb on - strand at 99.504 kb on - strand at 99.526 kb on + strand at 99.611 kb on + strand at 99.611 kb on + strand at 99.612 kb on - strand at 99.612 kb on - strand at 99.635 kb on + strand, within ABZR86_RS18400 at 99.635 kb on + strand, within ABZR86_RS18400 at 99.852 kb on - strand, within ABZR86_RS18400 at 99.852 kb on - strand, within ABZR86_RS18400 at 99.852 kb on - strand, within ABZR86_RS18400 at 100.094 kb on + strand, within ABZR86_RS18400 at 100.095 kb on - strand, within ABZR86_RS18400 at 100.095 kb on - strand, within ABZR86_RS18400 at 100.095 kb on - strand, within ABZR86_RS18400 at 100.162 kb on + strand, within ABZR86_RS18400 at 100.163 kb on - strand, within ABZR86_RS18400 at 100.341 kb on - strand, within ABZR86_RS18400 at 100.358 kb on + strand, within ABZR86_RS18400 at 100.358 kb on + strand, within ABZR86_RS18400 at 100.358 kb on + strand, within ABZR86_RS18400 at 100.358 kb on + strand, within ABZR86_RS18400 at 100.359 kb on - strand, within ABZR86_RS18400 at 100.406 kb on + strand, within ABZR86_RS18400 at 100.407 kb on - strand, within ABZR86_RS18400 at 100.407 kb on - strand, within ABZR86_RS18400 at 100.407 kb on - strand, within ABZR86_RS18400 at 100.556 kb on + strand, within ABZR86_RS18400 at 100.580 kb on + strand, within ABZR86_RS18400 at 100.580 kb on + strand, within ABZR86_RS18400 at 100.580 kb on + strand, within ABZR86_RS18400 at 100.581 kb on - strand, within ABZR86_RS18400 at 100.581 kb on - strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.583 kb on + strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.584 kb on - strand, within ABZR86_RS18400 at 100.652 kb on + strand, within ABZR86_RS18400 at 100.653 kb on - strand, within ABZR86_RS18400 at 100.778 kb on + strand, within ABZR86_RS18400 at 100.778 kb on + strand, within ABZR86_RS18400 at 100.797 kb on - strand, within ABZR86_RS18400 at 100.874 kb on + strand, within ABZR86_RS18400 at 100.874 kb on + strand, within ABZR86_RS18400 at 100.874 kb on + strand, within ABZR86_RS18400 at 100.875 kb on - strand, within ABZR86_RS18400 at 100.875 kb on - strand, within ABZR86_RS18400 at 100.875 kb on - strand, within ABZR86_RS18400 at 100.895 kb on - strand, within ABZR86_RS18400 at 100.958 kb on + strand, within ABZR86_RS18400 at 100.959 kb on - strand, within ABZR86_RS18400 at 100.959 kb on - strand, within ABZR86_RS18400 at 100.979 kb on + strand, within ABZR86_RS18400 at 100.979 kb on + strand, within ABZR86_RS18400 at 100.979 kb on + strand, within ABZR86_RS18400 at 100.979 kb on + strand, within ABZR86_RS18400 at 100.979 kb on + strand, within ABZR86_RS18400 at 100.979 kb on + strand, within ABZR86_RS18400 at 100.980 kb on - strand, within ABZR86_RS18400 at 100.980 kb on - strand, within ABZR86_RS18400 at 101.021 kb on + strand, within ABZR86_RS18400 at 101.021 kb on + strand, within ABZR86_RS18400 at 101.021 kb on + strand, within ABZR86_RS18400 at 101.022 kb on - strand, within ABZR86_RS18400 at 101.022 kb on - strand, within ABZR86_RS18400 at 101.022 kb on - strand, within ABZR86_RS18400 at 101.087 kb on + strand, within ABZR86_RS18400 at 101.087 kb on + strand, within ABZR86_RS18400 at 101.087 kb on + strand, within ABZR86_RS18400 at 101.088 kb on - strand, within ABZR86_RS18400 at 101.088 kb on - strand, within ABZR86_RS18400 at 101.120 kb on + strand, within ABZR86_RS18400 at 101.121 kb on - strand, within ABZR86_RS18400 at 101.205 kb on - strand, within ABZR86_RS18400 at 101.363 kb on + strand at 101.364 kb on - strand at 101.364 kb on - strand at 101.364 kb on - strand at 101.364 kb on - strand at 101.395 kb on + strand at 101.395 kb on + strand at 101.395 kb on + strand at 101.395 kb on + strand at 101.396 kb on - strand at 101.396 kb on - strand at 101.553 kb on - strand at 101.576 kb on + strand at 101.576 kb on + strand at 101.576 kb on + strand at 101.576 kb on + strand at 101.576 kb on + strand at 101.576 kb on + strand at 101.576 kb on + strand at 101.577 kb on - strand at 101.577 kb on - strand at 101.577 kb on - strand at 101.577 kb on - strand at 101.577 kb on - strand at 101.577 kb on - strand at 101.577 kb on - strand at 101.657 kb on + strand at 101.657 kb on + strand at 101.657 kb on + strand at 101.658 kb on - strand at 101.702 kb on + strand at 101.703 kb on - strand at 101.703 kb on - strand at 102.007 kb on + strand, within ABZR86_RS18405 at 102.007 kb on + strand, within ABZR86_RS18405 at 102.008 kb on - strand, within ABZR86_RS18405 at 102.008 kb on - strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.039 kb on + strand, within ABZR86_RS18405 at 102.040 kb on - strand, within ABZR86_RS18405 at 102.040 kb on - strand, within ABZR86_RS18405 at 102.171 kb on + strand, within ABZR86_RS18405 at 102.171 kb on + strand, within ABZR86_RS18405 at 102.516 kb on + strand, within ABZR86_RS18405 at 102.516 kb on + strand, within ABZR86_RS18405 at 102.517 kb on - strand, within ABZR86_RS18405 at 102.517 kb on - strand, within ABZR86_RS18405
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 98,578 + ABZR86_RS18390 0.40 +0.3 98,578 + ABZR86_RS18390 0.40 +0.1 98,578 + ABZR86_RS18390 0.40 +0.3 98,578 + ABZR86_RS18390 0.40 -0.2 98,578 + ABZR86_RS18390 0.40 +1.0 98,578 + ABZR86_RS18390 0.40 +1.3 98,578 + ABZR86_RS18390 0.40 +0.4 98,578 + ABZR86_RS18390 0.40 +0.1 98,578 + ABZR86_RS18390 0.40 -0.1 98,579 - ABZR86_RS18390 0.40 +0.3 98,579 - ABZR86_RS18390 0.40 +1.5 98,579 - ABZR86_RS18390 0.40 +0.7 98,710 + ABZR86_RS18390 0.57 +0.2 98,710 + ABZR86_RS18390 0.57 +0.7 98,711 - ABZR86_RS18390 0.58 +1.2 98,711 - ABZR86_RS18390 0.58 -0.3 98,785 + ABZR86_RS18390 0.67 +0.4 98,785 + ABZR86_RS18390 0.67 -0.1 98,786 - ABZR86_RS18390 0.67 +0.5 98,786 - ABZR86_RS18390 0.67 +0.0 98,786 - ABZR86_RS18390 0.67 +1.0 98,932 + ABZR86_RS18390 0.87 +0.6 98,933 - ABZR86_RS18390 0.87 -1.0 98,933 - ABZR86_RS18390 0.87 -1.0 99,071 + +0.0 99,071 + +1.9 99,071 + +0.3 99,071 + -0.1 99,072 - -0.3 99,072 - +0.1 99,325 + +0.4 99,326 - -0.8 99,326 - +0.4 99,366 + +0.0 99,366 + -0.7 99,366 + +0.6 99,366 + +0.5 99,366 + +0.2 99,366 + +0.4 99,367 - +0.8 99,367 - -0.4 99,367 - +0.6 99,367 - +0.2 99,368 + +0.8 99,368 + +0.9 99,368 + -0.4 99,368 + +0.5 99,368 + +0.5 99,368 + -0.1 99,368 + +1.0 99,368 + -0.1 99,368 + -0.6 99,369 - -0.7 99,369 - +0.6 99,369 - +0.1 99,369 - +0.4 99,369 - +1.3 99,369 - +0.3 99,369 - +1.5 99,369 - +1.1 99,370 + -0.1 99,370 + +0.1 99,370 + +0.5 99,370 + +0.3 99,370 + -0.2 99,370 + +0.3 99,371 - +0.6 99,371 - -0.5 99,371 - +0.6 99,371 - +1.3 99,371 - +0.1 99,371 - +0.5 99,371 - +0.1 99,371 - +0.8 99,371 - +0.6 99,371 - +0.4 99,429 + +1.5 99,429 + +0.1 99,430 - -0.3 99,504 - -0.3 99,504 - +1.7 99,504 - -0.7 99,526 + -1.0 99,611 + +0.1 99,611 + -0.2 99,612 - +0.1 99,612 - +0.1 99,635 + ABZR86_RS18400 0.10 +1.2 99,635 + ABZR86_RS18400 0.10 +1.0 99,852 - ABZR86_RS18400 0.20 -0.1 99,852 - ABZR86_RS18400 0.20 +0.3 99,852 - ABZR86_RS18400 0.20 -0.2 100,094 + ABZR86_RS18400 0.31 +0.3 100,095 - ABZR86_RS18400 0.31 -0.6 100,095 - ABZR86_RS18400 0.31 +0.5 100,095 - ABZR86_RS18400 0.31 +2.6 100,162 + ABZR86_RS18400 0.34 -1.3 100,163 - ABZR86_RS18400 0.35 -0.1 100,341 - ABZR86_RS18400 0.43 +0.4 100,358 + ABZR86_RS18400 0.44 +0.6 100,358 + ABZR86_RS18400 0.44 +0.7 100,358 + ABZR86_RS18400 0.44 -0.8 100,358 + ABZR86_RS18400 0.44 +1.1 100,359 - ABZR86_RS18400 0.44 +1.0 100,406 + ABZR86_RS18400 0.46 -0.2 100,407 - ABZR86_RS18400 0.46 +0.1 100,407 - ABZR86_RS18400 0.46 -0.0 100,407 - ABZR86_RS18400 0.46 +0.9 100,556 + ABZR86_RS18400 0.53 +0.8 100,580 + ABZR86_RS18400 0.54 +0.2 100,580 + ABZR86_RS18400 0.54 -1.1 100,580 + ABZR86_RS18400 0.54 +1.5 100,581 - ABZR86_RS18400 0.54 -0.8 100,581 - ABZR86_RS18400 0.54 +0.1 100,583 + ABZR86_RS18400 0.54 +0.4 100,583 + ABZR86_RS18400 0.54 +0.1 100,583 + ABZR86_RS18400 0.54 +0.9 100,583 + ABZR86_RS18400 0.54 +0.6 100,583 + ABZR86_RS18400 0.54 +0.5 100,583 + ABZR86_RS18400 0.54 +0.0 100,583 + ABZR86_RS18400 0.54 +1.5 100,584 - ABZR86_RS18400 0.54 +1.1 100,584 - ABZR86_RS18400 0.54 +0.6 100,584 - ABZR86_RS18400 0.54 +0.3 100,584 - ABZR86_RS18400 0.54 -0.2 100,584 - ABZR86_RS18400 0.54 -0.4 100,584 - ABZR86_RS18400 0.54 +0.3 100,584 - ABZR86_RS18400 0.54 +1.3 100,584 - ABZR86_RS18400 0.54 +0.2 100,652 + ABZR86_RS18400 0.57 -0.2 100,653 - ABZR86_RS18400 0.57 +1.7 100,778 + ABZR86_RS18400 0.63 +0.7 100,778 + ABZR86_RS18400 0.63 -0.2 100,797 - ABZR86_RS18400 0.64 +0.6 100,874 + ABZR86_RS18400 0.67 +0.8 100,874 + ABZR86_RS18400 0.67 +0.6 100,874 + ABZR86_RS18400 0.67 +0.0 100,875 - ABZR86_RS18400 0.67 +0.7 100,875 - ABZR86_RS18400 0.67 -0.2 100,875 - ABZR86_RS18400 0.67 +0.2 100,895 - ABZR86_RS18400 0.68 +0.7 100,958 + ABZR86_RS18400 0.71 +0.3 100,959 - ABZR86_RS18400 0.71 +0.6 100,959 - ABZR86_RS18400 0.71 +0.1 100,979 + ABZR86_RS18400 0.72 -0.1 100,979 + ABZR86_RS18400 0.72 +0.5 100,979 + ABZR86_RS18400 0.72 +0.8 100,979 + ABZR86_RS18400 0.72 +0.4 100,979 + ABZR86_RS18400 0.72 -0.1 100,979 + ABZR86_RS18400 0.72 -0.2 100,980 - ABZR86_RS18400 0.72 +0.7 100,980 - ABZR86_RS18400 0.72 +0.1 101,021 + ABZR86_RS18400 0.74 +1.4 101,021 + ABZR86_RS18400 0.74 +0.6 101,021 + ABZR86_RS18400 0.74 -0.5 101,022 - ABZR86_RS18400 0.74 -0.2 101,022 - ABZR86_RS18400 0.74 +0.4 101,022 - ABZR86_RS18400 0.74 -0.1 101,087 + ABZR86_RS18400 0.77 +1.0 101,087 + ABZR86_RS18400 0.77 +0.4 101,087 + ABZR86_RS18400 0.77 +0.3 101,088 - ABZR86_RS18400 0.77 +0.5 101,088 - ABZR86_RS18400 0.77 +0.4 101,120 + ABZR86_RS18400 0.79 +1.0 101,121 - ABZR86_RS18400 0.79 +1.0 101,205 - ABZR86_RS18400 0.83 +0.5 101,363 + +0.3 101,364 - -1.9 101,364 - -0.3 101,364 - +0.2 101,364 - +0.0 101,395 + -0.0 101,395 + +0.1 101,395 + +0.3 101,395 + -0.5 101,396 - +2.3 101,396 - +0.5 101,553 - -0.3 101,576 + -0.3 101,576 + +0.2 101,576 + +0.3 101,576 + +0.6 101,576 + -0.7 101,576 + +0.1 101,576 + +0.6 101,577 - -0.6 101,577 - +0.1 101,577 - +2.1 101,577 - +1.2 101,577 - +0.2 101,577 - +0.4 101,577 - +1.1 101,657 + -0.2 101,657 + +0.0 101,657 + +0.8 101,658 - +1.7 101,702 + +0.5 101,703 - +0.2 101,703 - +0.1 102,007 + ABZR86_RS18405 0.37 +0.6 102,007 + ABZR86_RS18405 0.37 +1.0 102,008 - ABZR86_RS18405 0.37 -0.8 102,008 - ABZR86_RS18405 0.37 -0.3 102,039 + ABZR86_RS18405 0.40 -0.1 102,039 + ABZR86_RS18405 0.40 +0.2 102,039 + ABZR86_RS18405 0.40 -1.4 102,039 + ABZR86_RS18405 0.40 +0.9 102,039 + ABZR86_RS18405 0.40 +1.0 102,039 + ABZR86_RS18405 0.40 +0.1 102,039 + ABZR86_RS18405 0.40 -0.5 102,040 - ABZR86_RS18405 0.40 +0.0 102,040 - ABZR86_RS18405 0.40 +0.3 102,171 + ABZR86_RS18405 0.54 -0.7 102,171 + ABZR86_RS18405 0.54 -0.4 102,516 + ABZR86_RS18405 0.89 +0.4 102,516 + ABZR86_RS18405 0.89 -0.2 102,517 - ABZR86_RS18405 0.90 -0.5 102,517 - ABZR86_RS18405 0.90 +0.4
Or see this region's nucleotide sequence