Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14510 and ABZR86_RS14515 are separated by 13 nucleotides ABZR86_RS14515 and ABZR86_RS14520 are separated by 31 nucleotides ABZR86_RS14520 and ABZR86_RS14525 are separated by 77 nucleotides ABZR86_RS14525 and ABZR86_RS14530 overlap by 8 nucleotides ABZR86_RS14530 and ABZR86_RS14535 are separated by 40 nucleotides
ABZR86_RS14510: ABZR86_RS14510 - tail fiber protein, at 3,254,155 to 3,254,655
_RS14510
ABZR86_RS14515: ABZR86_RS14515 - tail fiber protein, at 3,254,669 to 3,255,199
_RS14515
ABZR86_RS14520: ABZR86_RS14520 - tail fiber protein, at 3,255,231 to 3,255,770
_RS14520
ABZR86_RS14525: ABZR86_RS14525 - GNAT family N-acetyltransferase, at 3,255,848 to 3,256,330
_RS14525
ABZR86_RS14530: ABZR86_RS14530 - hypothetical protein, at 3,256,323 to 3,256,619
_RS14530
ABZR86_RS14535: ABZR86_RS14535 - hypothetical protein, at 3,256,660 to 3,256,887
_RS14535
Position (kb)
3255
3256 Strain fitness (log2 ratio)
-1
0
1 at 3254.285 kb on - strand, within ABZR86_RS14510 at 3254.287 kb on + strand, within ABZR86_RS14510 at 3254.287 kb on + strand, within ABZR86_RS14510 at 3254.288 kb on - strand, within ABZR86_RS14510 at 3254.515 kb on + strand, within ABZR86_RS14510 at 3254.515 kb on + strand, within ABZR86_RS14510 at 3254.515 kb on + strand, within ABZR86_RS14510 at 3254.516 kb on - strand, within ABZR86_RS14510 at 3254.516 kb on - strand, within ABZR86_RS14510 at 3254.638 kb on + strand at 3254.639 kb on - strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.768 kb on + strand, within ABZR86_RS14515 at 3254.769 kb on - strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.781 kb on - strand, within ABZR86_RS14515 at 3254.801 kb on + strand, within ABZR86_RS14515 at 3254.891 kb on + strand, within ABZR86_RS14515 at 3254.891 kb on + strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.956 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.967 kb on - strand, within ABZR86_RS14515 at 3254.967 kb on - strand, within ABZR86_RS14515 at 3254.967 kb on - strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3255.048 kb on - strand, within ABZR86_RS14515 at 3255.048 kb on - strand, within ABZR86_RS14515 at 3255.264 kb on + strand at 3255.264 kb on + strand at 3255.286 kb on - strand, within ABZR86_RS14520 at 3255.286 kb on - strand, within ABZR86_RS14520 at 3255.332 kb on + strand, within ABZR86_RS14520 at 3255.402 kb on + strand, within ABZR86_RS14520 at 3255.402 kb on + strand, within ABZR86_RS14520 at 3255.537 kb on + strand, within ABZR86_RS14520 at 3255.538 kb on - strand, within ABZR86_RS14520 at 3255.538 kb on - strand, within ABZR86_RS14520 at 3255.538 kb on - strand, within ABZR86_RS14520 at 3255.557 kb on + strand, within ABZR86_RS14520 at 3255.714 kb on + strand, within ABZR86_RS14520 at 3255.899 kb on + strand, within ABZR86_RS14525 at 3255.909 kb on + strand, within ABZR86_RS14525 at 3255.909 kb on + strand, within ABZR86_RS14525 at 3255.910 kb on - strand, within ABZR86_RS14525 at 3255.910 kb on - strand, within ABZR86_RS14525 at 3255.998 kb on + strand, within ABZR86_RS14525 at 3255.998 kb on + strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3256.025 kb on + strand, within ABZR86_RS14525 at 3256.067 kb on + strand, within ABZR86_RS14525 at 3256.067 kb on + strand, within ABZR86_RS14525 at 3256.495 kb on + strand, within ABZR86_RS14530 at 3256.703 kb on + strand, within ABZR86_RS14535 at 3256.704 kb on - strand, within ABZR86_RS14535
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,254,285 - ABZR86_RS14510 0.26 -0.1 3,254,287 + ABZR86_RS14510 0.26 -0.9 3,254,287 + ABZR86_RS14510 0.26 -0.2 3,254,288 - ABZR86_RS14510 0.27 +0.4 3,254,515 + ABZR86_RS14510 0.72 +0.1 3,254,515 + ABZR86_RS14510 0.72 -0.1 3,254,515 + ABZR86_RS14510 0.72 +0.7 3,254,516 - ABZR86_RS14510 0.72 +0.2 3,254,516 - ABZR86_RS14510 0.72 +0.1 3,254,638 + -0.6 3,254,639 - +0.5 3,254,681 + -1.0 3,254,681 + -1.1 3,254,681 + +0.1 3,254,681 + +0.5 3,254,681 + -0.3 3,254,681 + +1.1 3,254,682 - +0.4 3,254,682 - -0.5 3,254,682 - -0.4 3,254,682 - -0.1 3,254,682 - +0.0 3,254,682 - +1.3 3,254,768 + ABZR86_RS14515 0.19 -0.5 3,254,769 - ABZR86_RS14515 0.19 +0.3 3,254,780 + ABZR86_RS14515 0.21 -0.7 3,254,780 + ABZR86_RS14515 0.21 -1.0 3,254,780 + ABZR86_RS14515 0.21 +0.4 3,254,780 + ABZR86_RS14515 0.21 -0.4 3,254,781 - ABZR86_RS14515 0.21 +0.6 3,254,801 + ABZR86_RS14515 0.25 -0.4 3,254,891 + ABZR86_RS14515 0.42 -0.1 3,254,891 + ABZR86_RS14515 0.42 -0.4 3,254,892 - ABZR86_RS14515 0.42 +0.0 3,254,892 - ABZR86_RS14515 0.42 +0.0 3,254,892 - ABZR86_RS14515 0.42 -1.0 3,254,892 - ABZR86_RS14515 0.42 +1.3 3,254,892 - ABZR86_RS14515 0.42 +0.3 3,254,892 - ABZR86_RS14515 0.42 +0.2 3,254,956 + ABZR86_RS14515 0.54 +0.1 3,254,966 + ABZR86_RS14515 0.56 -0.5 3,254,966 + ABZR86_RS14515 0.56 +1.0 3,254,966 + ABZR86_RS14515 0.56 -0.1 3,254,966 + ABZR86_RS14515 0.56 +0.2 3,254,966 + ABZR86_RS14515 0.56 +0.2 3,254,966 + ABZR86_RS14515 0.56 -0.3 3,254,966 + ABZR86_RS14515 0.56 +0.4 3,254,967 - ABZR86_RS14515 0.56 +0.0 3,254,967 - ABZR86_RS14515 0.56 +0.7 3,254,967 - ABZR86_RS14515 0.56 +0.2 3,254,969 + ABZR86_RS14515 0.56 -0.4 3,254,969 + ABZR86_RS14515 0.56 +0.5 3,254,969 + ABZR86_RS14515 0.56 +0.7 3,254,969 + ABZR86_RS14515 0.56 -0.4 3,254,969 + ABZR86_RS14515 0.56 -0.0 3,255,048 - ABZR86_RS14515 0.71 +0.6 3,255,048 - ABZR86_RS14515 0.71 +0.3 3,255,264 + +0.9 3,255,264 + +0.4 3,255,286 - ABZR86_RS14520 0.10 -0.5 3,255,286 - ABZR86_RS14520 0.10 +0.4 3,255,332 + ABZR86_RS14520 0.19 +0.7 3,255,402 + ABZR86_RS14520 0.32 -0.6 3,255,402 + ABZR86_RS14520 0.32 +0.6 3,255,537 + ABZR86_RS14520 0.57 -0.3 3,255,538 - ABZR86_RS14520 0.57 -0.6 3,255,538 - ABZR86_RS14520 0.57 +0.5 3,255,538 - ABZR86_RS14520 0.57 -0.5 3,255,557 + ABZR86_RS14520 0.60 +0.8 3,255,714 + ABZR86_RS14520 0.89 +0.4 3,255,899 + ABZR86_RS14525 0.11 +0.0 3,255,909 + ABZR86_RS14525 0.13 -0.9 3,255,909 + ABZR86_RS14525 0.13 -0.0 3,255,910 - ABZR86_RS14525 0.13 -0.2 3,255,910 - ABZR86_RS14525 0.13 -0.2 3,255,998 + ABZR86_RS14525 0.31 -0.7 3,255,998 + ABZR86_RS14525 0.31 +0.1 3,255,999 - ABZR86_RS14525 0.31 -1.2 3,255,999 - ABZR86_RS14525 0.31 -0.9 3,255,999 - ABZR86_RS14525 0.31 +0.3 3,255,999 - ABZR86_RS14525 0.31 -0.5 3,256,025 + ABZR86_RS14525 0.37 -0.7 3,256,067 + ABZR86_RS14525 0.45 -0.0 3,256,067 + ABZR86_RS14525 0.45 +0.7 3,256,495 + ABZR86_RS14530 0.58 -0.3 3,256,703 + ABZR86_RS14535 0.19 +0.0 3,256,704 - ABZR86_RS14535 0.19 +0.7
Or see this region's nucleotide sequence