Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13560 and ABZR86_RS13565 overlap by 53 nucleotides ABZR86_RS13565 and ABZR86_RS13570 overlap by 4 nucleotides ABZR86_RS13570 and ABZR86_RS13575 are separated by 71 nucleotides ABZR86_RS13575 and ABZR86_RS13580 are separated by 94 nucleotides
ABZR86_RS13560: ABZR86_RS13560 - LolA-related protein, at 3,036,852 to 3,037,493
_RS13560
ABZR86_RS13565: ABZR86_RS13565 - acyltransferase, at 3,037,441 to 3,038,394
_RS13565
ABZR86_RS13570: ABZR86_RS13570 - hydroxymyristoyl-ACP dehydratase, at 3,038,391 to 3,038,690
_RS13570
ABZR86_RS13575: ABZR86_RS13575 - phosphopantetheine-binding protein, at 3,038,762 to 3,039,034
_RS13575
ABZR86_RS13580: ABZR86_RS13580 - pteridine-dependent deoxygenase, at 3,039,129 to 3,040,121
_RS13580
Position (kb)
3038
3039 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3037.517 kb on + strand at 3037.517 kb on + strand at 3037.533 kb on + strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.536 kb on - strand at 3037.536 kb on - strand at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.717 kb on - strand, within ABZR86_RS13565 at 3037.717 kb on - strand, within ABZR86_RS13565 at 3037.717 kb on - strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.270 kb on + strand, within ABZR86_RS13565 at 3038.270 kb on + strand, within ABZR86_RS13565 at 3038.270 kb on + strand, within ABZR86_RS13565 at 3038.271 kb on - strand, within ABZR86_RS13565 at 3038.271 kb on - strand, within ABZR86_RS13565 at 3038.318 kb on + strand at 3038.331 kb on + strand at 3038.332 kb on - strand at 3038.332 kb on - strand at 3038.677 kb on + strand at 3038.677 kb on + strand at 3038.677 kb on + strand at 3038.677 kb on + strand at 3038.678 kb on - strand at 3038.678 kb on - strand at 3038.862 kb on + strand, within ABZR86_RS13575 at 3038.863 kb on - strand, within ABZR86_RS13575 at 3039.056 kb on + strand at 3039.056 kb on + strand at 3039.056 kb on + strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.193 kb on - strand at 3039.193 kb on - strand at 3039.289 kb on - strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.690 kb on + strand, within ABZR86_RS13580
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,037,517 + -0.3 3,037,517 + -1.0 3,037,533 + -0.2 3,037,534 - +1.2 3,037,534 - +0.1 3,037,534 - -0.7 3,037,534 - -0.8 3,037,534 - -1.4 3,037,535 + -0.2 3,037,535 + +0.1 3,037,535 + -0.9 3,037,535 + -2.6 3,037,535 + +0.0 3,037,535 + +0.7 3,037,536 - -0.0 3,037,536 - -1.7 3,037,553 + ABZR86_RS13565 0.12 -1.1 3,037,553 + ABZR86_RS13565 0.12 -1.1 3,037,553 + ABZR86_RS13565 0.12 -0.6 3,037,553 + ABZR86_RS13565 0.12 -1.8 3,037,553 + ABZR86_RS13565 0.12 -0.2 3,037,553 + ABZR86_RS13565 0.12 -1.5 3,037,553 + ABZR86_RS13565 0.12 -0.1 3,037,553 + ABZR86_RS13565 0.12 -0.5 3,037,553 + ABZR86_RS13565 0.12 +1.5 3,037,553 + ABZR86_RS13565 0.12 +0.4 3,037,554 - ABZR86_RS13565 0.12 -0.6 3,037,554 - ABZR86_RS13565 0.12 -1.3 3,037,554 - ABZR86_RS13565 0.12 -1.3 3,037,554 - ABZR86_RS13565 0.12 -2.0 3,037,554 - ABZR86_RS13565 0.12 -0.4 3,037,554 - ABZR86_RS13565 0.12 -1.4 3,037,554 - ABZR86_RS13565 0.12 -0.4 3,037,554 - ABZR86_RS13565 0.12 -0.8 3,037,554 - ABZR86_RS13565 0.12 -1.2 3,037,554 - ABZR86_RS13565 0.12 -1.3 3,037,554 - ABZR86_RS13565 0.12 -0.6 3,037,554 - ABZR86_RS13565 0.12 +0.3 3,037,554 - ABZR86_RS13565 0.12 -1.5 3,037,716 + ABZR86_RS13565 0.29 -1.8 3,037,716 + ABZR86_RS13565 0.29 -0.9 3,037,716 + ABZR86_RS13565 0.29 -0.1 3,037,716 + ABZR86_RS13565 0.29 -0.2 3,037,717 - ABZR86_RS13565 0.29 -1.1 3,037,717 - ABZR86_RS13565 0.29 -1.6 3,037,717 - ABZR86_RS13565 0.29 -0.7 3,038,264 + ABZR86_RS13565 0.86 -1.6 3,038,264 + ABZR86_RS13565 0.86 -0.7 3,038,264 + ABZR86_RS13565 0.86 +0.3 3,038,264 + ABZR86_RS13565 0.86 -0.5 3,038,264 + ABZR86_RS13565 0.86 -1.4 3,038,270 + ABZR86_RS13565 0.87 +0.4 3,038,270 + ABZR86_RS13565 0.87 -1.5 3,038,270 + ABZR86_RS13565 0.87 -1.3 3,038,271 - ABZR86_RS13565 0.87 -0.9 3,038,271 - ABZR86_RS13565 0.87 -0.4 3,038,318 + +0.2 3,038,331 + -0.5 3,038,332 - -0.2 3,038,332 - -1.4 3,038,677 + -0.1 3,038,677 + +0.8 3,038,677 + -0.2 3,038,677 + +0.9 3,038,678 - +0.5 3,038,678 - +0.5 3,038,862 + ABZR86_RS13575 0.37 -1.0 3,038,863 - ABZR86_RS13575 0.37 -1.1 3,039,056 + -0.8 3,039,056 + +0.9 3,039,056 + -1.0 3,039,057 - -0.2 3,039,057 - +0.3 3,039,057 - +0.2 3,039,057 - -0.4 3,039,057 - -0.8 3,039,094 + -0.3 3,039,094 + -0.8 3,039,094 + +0.4 3,039,094 + -0.8 3,039,094 + -0.1 3,039,094 + -0.6 3,039,094 + +0.4 3,039,094 + +0.2 3,039,095 - +0.4 3,039,095 - +0.3 3,039,095 - +0.3 3,039,095 - -1.0 3,039,095 - -0.1 3,039,095 - +0.0 3,039,095 - +0.1 3,039,095 - +0.1 3,039,193 - -0.7 3,039,193 - -0.2 3,039,289 - ABZR86_RS13580 0.16 +1.7 3,039,337 + ABZR86_RS13580 0.21 +0.5 3,039,337 + ABZR86_RS13580 0.21 +0.3 3,039,337 + ABZR86_RS13580 0.21 -0.0 3,039,337 + ABZR86_RS13580 0.21 +0.1 3,039,337 + ABZR86_RS13580 0.21 -0.9 3,039,337 + ABZR86_RS13580 0.21 -0.1 3,039,338 - ABZR86_RS13580 0.21 -0.5 3,039,338 - ABZR86_RS13580 0.21 -0.1 3,039,338 - ABZR86_RS13580 0.21 +0.8 3,039,537 + ABZR86_RS13580 0.41 -0.5 3,039,537 + ABZR86_RS13580 0.41 +1.9 3,039,537 + ABZR86_RS13580 0.41 +0.5 3,039,537 + ABZR86_RS13580 0.41 +0.6 3,039,537 + ABZR86_RS13580 0.41 +0.4 3,039,538 - ABZR86_RS13580 0.41 -0.0 3,039,538 - ABZR86_RS13580 0.41 +1.3 3,039,538 - ABZR86_RS13580 0.41 -0.5 3,039,579 + ABZR86_RS13580 0.45 +0.9 3,039,579 + ABZR86_RS13580 0.45 -0.7 3,039,579 + ABZR86_RS13580 0.45 +0.6 3,039,579 + ABZR86_RS13580 0.45 +0.5 3,039,579 + ABZR86_RS13580 0.45 +0.8 3,039,690 + ABZR86_RS13580 0.56 +0.4
Or see this region's nucleotide sequence