Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11775 and ABZR86_RS11780 overlap by 1 nucleotides ABZR86_RS11780 and ABZR86_RS11785 overlap by 4 nucleotides ABZR86_RS11785 and ABZR86_RS11790 are separated by 168 nucleotides
ABZR86_RS11775: ABZR86_RS11775 - DUF4381 family protein, at 2,641,380 to 2,641,910
_RS11775
ABZR86_RS11780: ABZR86_RS11780 - DUF58 domain-containing protein, at 2,641,910 to 2,642,848
_RS11780
ABZR86_RS11785: ABZR86_RS11785 - MoxR family ATPase, at 2,642,845 to 2,643,840
_RS11785
ABZR86_RS11790: ABZR86_RS11790 - type IV pilus secretin PilQ, at 2,644,009 to 2,646,201
_RS11790
Position (kb)
2642
2643
2644 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2641.901 kb on + strand at 2642.676 kb on + strand, within ABZR86_RS11780 at 2642.677 kb on - strand, within ABZR86_RS11780 at 2643.131 kb on + strand, within ABZR86_RS11785 at 2643.131 kb on + strand, within ABZR86_RS11785 at 2643.131 kb on + strand, within ABZR86_RS11785 at 2643.132 kb on - strand, within ABZR86_RS11785 at 2643.132 kb on - strand, within ABZR86_RS11785 at 2643.132 kb on - strand, within ABZR86_RS11785 at 2643.166 kb on + strand, within ABZR86_RS11785 at 2643.166 kb on + strand, within ABZR86_RS11785 at 2643.166 kb on + strand, within ABZR86_RS11785 at 2643.187 kb on + strand, within ABZR86_RS11785 at 2643.188 kb on - strand, within ABZR86_RS11785 at 2643.188 kb on - strand, within ABZR86_RS11785 at 2643.639 kb on + strand, within ABZR86_RS11785 at 2643.639 kb on + strand, within ABZR86_RS11785 at 2643.639 kb on + strand, within ABZR86_RS11785 at 2643.640 kb on - strand, within ABZR86_RS11785 at 2643.640 kb on - strand, within ABZR86_RS11785 at 2643.793 kb on - strand at 2643.867 kb on + strand at 2643.868 kb on - strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2643.933 kb on + strand at 2644.163 kb on + strand at 2644.163 kb on + strand at 2644.164 kb on - strand at 2644.164 kb on - strand at 2644.164 kb on - strand at 2644.164 kb on - strand at 2644.164 kb on - strand at 2644.164 kb on - strand at 2644.198 kb on + strand at 2644.304 kb on + strand, within ABZR86_RS11790 at 2644.305 kb on - strand, within ABZR86_RS11790 at 2644.412 kb on + strand, within ABZR86_RS11790 at 2644.412 kb on + strand, within ABZR86_RS11790 at 2644.544 kb on + strand, within ABZR86_RS11790 at 2644.544 kb on + strand, within ABZR86_RS11790 at 2644.544 kb on + strand, within ABZR86_RS11790 at 2644.544 kb on + strand, within ABZR86_RS11790 at 2644.545 kb on - strand, within ABZR86_RS11790 at 2644.545 kb on - strand, within ABZR86_RS11790 at 2644.545 kb on - strand, within ABZR86_RS11790 at 2644.634 kb on + strand, within ABZR86_RS11790 at 2644.634 kb on + strand, within ABZR86_RS11790 at 2644.634 kb on + strand, within ABZR86_RS11790 at 2644.634 kb on + strand, within ABZR86_RS11790 at 2644.635 kb on - strand, within ABZR86_RS11790 at 2644.635 kb on - strand, within ABZR86_RS11790 at 2644.635 kb on - strand, within ABZR86_RS11790 at 2644.635 kb on - strand, within ABZR86_RS11790 at 2644.635 kb on - strand, within ABZR86_RS11790 at 2644.668 kb on + strand, within ABZR86_RS11790 at 2644.668 kb on + strand, within ABZR86_RS11790 at 2644.668 kb on + strand, within ABZR86_RS11790 at 2644.668 kb on + strand, within ABZR86_RS11790 at 2644.746 kb on + strand, within ABZR86_RS11790 at 2644.746 kb on + strand, within ABZR86_RS11790 at 2644.746 kb on + strand, within ABZR86_RS11790 at 2644.747 kb on - strand, within ABZR86_RS11790 at 2644.771 kb on + strand, within ABZR86_RS11790 at 2644.794 kb on + strand, within ABZR86_RS11790
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 2,641,901 + -0.0 2,642,676 + ABZR86_RS11780 0.82 -0.2 2,642,677 - ABZR86_RS11780 0.82 -0.0 2,643,131 + ABZR86_RS11785 0.29 -1.0 2,643,131 + ABZR86_RS11785 0.29 +0.3 2,643,131 + ABZR86_RS11785 0.29 -0.2 2,643,132 - ABZR86_RS11785 0.29 -0.1 2,643,132 - ABZR86_RS11785 0.29 +0.5 2,643,132 - ABZR86_RS11785 0.29 -0.3 2,643,166 + ABZR86_RS11785 0.32 -1.2 2,643,166 + ABZR86_RS11785 0.32 +0.2 2,643,166 + ABZR86_RS11785 0.32 -0.8 2,643,187 + ABZR86_RS11785 0.34 -0.5 2,643,188 - ABZR86_RS11785 0.34 +0.2 2,643,188 - ABZR86_RS11785 0.34 -0.1 2,643,639 + ABZR86_RS11785 0.80 +1.0 2,643,639 + ABZR86_RS11785 0.80 -0.4 2,643,639 + ABZR86_RS11785 0.80 -0.1 2,643,640 - ABZR86_RS11785 0.80 +0.2 2,643,640 - ABZR86_RS11785 0.80 -0.4 2,643,793 - +0.7 2,643,867 + +0.7 2,643,868 - -0.2 2,643,933 + +0.8 2,643,933 + -0.1 2,643,933 + -1.8 2,643,933 + -0.9 2,643,933 + -0.8 2,643,933 + +0.4 2,643,933 + -0.2 2,643,933 + +0.1 2,644,163 + -0.3 2,644,163 + +0.7 2,644,164 - -0.1 2,644,164 - -3.4 2,644,164 - +0.9 2,644,164 - -0.1 2,644,164 - -0.0 2,644,164 - +0.1 2,644,198 + -1.4 2,644,304 + ABZR86_RS11790 0.13 +0.6 2,644,305 - ABZR86_RS11790 0.13 +0.4 2,644,412 + ABZR86_RS11790 0.18 +0.3 2,644,412 + ABZR86_RS11790 0.18 +0.1 2,644,544 + ABZR86_RS11790 0.24 -0.2 2,644,544 + ABZR86_RS11790 0.24 -0.0 2,644,544 + ABZR86_RS11790 0.24 -0.5 2,644,544 + ABZR86_RS11790 0.24 +0.0 2,644,545 - ABZR86_RS11790 0.24 +0.0 2,644,545 - ABZR86_RS11790 0.24 -0.2 2,644,545 - ABZR86_RS11790 0.24 -0.1 2,644,634 + ABZR86_RS11790 0.28 +1.3 2,644,634 + ABZR86_RS11790 0.28 +1.9 2,644,634 + ABZR86_RS11790 0.28 -0.3 2,644,634 + ABZR86_RS11790 0.28 +0.6 2,644,635 - ABZR86_RS11790 0.29 -0.6 2,644,635 - ABZR86_RS11790 0.29 +0.4 2,644,635 - ABZR86_RS11790 0.29 +0.6 2,644,635 - ABZR86_RS11790 0.29 -0.1 2,644,635 - ABZR86_RS11790 0.29 -0.6 2,644,668 + ABZR86_RS11790 0.30 -1.2 2,644,668 + ABZR86_RS11790 0.30 -0.5 2,644,668 + ABZR86_RS11790 0.30 -0.4 2,644,668 + ABZR86_RS11790 0.30 -0.8 2,644,746 + ABZR86_RS11790 0.34 +0.8 2,644,746 + ABZR86_RS11790 0.34 -0.4 2,644,746 + ABZR86_RS11790 0.34 -0.4 2,644,747 - ABZR86_RS11790 0.34 -2.5 2,644,771 + ABZR86_RS11790 0.35 -0.9 2,644,794 + ABZR86_RS11790 0.36 -0.2
Or see this region's nucleotide sequence