Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11760 and ABZR86_RS11765 overlap by 1 nucleotides ABZR86_RS11765 and ABZR86_RS11770 overlap by 1 nucleotides ABZR86_RS11770 and ABZR86_RS11775 overlap by 8 nucleotides
ABZR86_RS11760: ABZR86_RS11760 - BatD family protein, at 2,636,830 to 2,638,512
_RS11760
ABZR86_RS11765: ABZR86_RS11765 - VWA domain-containing protein, at 2,638,512 to 2,640,401
_RS11765
ABZR86_RS11770: ABZR86_RS11770 - VWA domain-containing protein, at 2,640,401 to 2,641,387
_RS11770
ABZR86_RS11775: ABZR86_RS11775 - DUF4381 family protein, at 2,641,380 to 2,641,910
_RS11775
Position (kb)
2638
2639
2640
2641 Strain fitness (log2 ratio)
-1
0
1
2 at 2637.561 kb on - strand, within ABZR86_RS11760 at 2637.612 kb on - strand, within ABZR86_RS11760 at 2637.906 kb on - strand, within ABZR86_RS11760 at 2637.926 kb on + strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.927 kb on - strand, within ABZR86_RS11760 at 2637.954 kb on - strand, within ABZR86_RS11760 at 2638.040 kb on + strand, within ABZR86_RS11760 at 2638.040 kb on + strand, within ABZR86_RS11760 at 2638.040 kb on + strand, within ABZR86_RS11760 at 2638.041 kb on - strand, within ABZR86_RS11760 at 2638.041 kb on - strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.076 kb on + strand, within ABZR86_RS11760 at 2638.077 kb on - strand, within ABZR86_RS11760 at 2638.077 kb on - strand, within ABZR86_RS11760 at 2638.250 kb on + strand, within ABZR86_RS11760 at 2638.250 kb on + strand, within ABZR86_RS11760 at 2638.250 kb on + strand, within ABZR86_RS11760 at 2638.251 kb on - strand, within ABZR86_RS11760 at 2638.251 kb on - strand, within ABZR86_RS11760 at 2638.389 kb on + strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.390 kb on - strand at 2638.550 kb on - strand at 2639.122 kb on + strand, within ABZR86_RS11765 at 2639.179 kb on + strand, within ABZR86_RS11765 at 2639.180 kb on - strand, within ABZR86_RS11765 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.733 kb on + strand, within ABZR86_RS11765 at 2639.734 kb on - strand, within ABZR86_RS11765 at 2639.986 kb on + strand, within ABZR86_RS11765 at 2640.074 kb on + strand, within ABZR86_RS11765 at 2640.075 kb on - strand, within ABZR86_RS11765 at 2640.137 kb on - strand, within ABZR86_RS11765 at 2640.328 kb on + strand at 2640.328 kb on + strand at 2640.723 kb on + strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2641.166 kb on + strand, within ABZR86_RS11770 at 2641.167 kb on - strand, within ABZR86_RS11770
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 2,637,561 - ABZR86_RS11760 0.43 -0.2 2,637,612 - ABZR86_RS11760 0.46 +0.1 2,637,906 - ABZR86_RS11760 0.64 -0.1 2,637,926 + ABZR86_RS11760 0.65 -0.6 2,637,927 - ABZR86_RS11760 0.65 -1.1 2,637,927 - ABZR86_RS11760 0.65 -1.7 2,637,927 - ABZR86_RS11760 0.65 -0.6 2,637,927 - ABZR86_RS11760 0.65 -0.4 2,637,954 - ABZR86_RS11760 0.67 +0.6 2,638,040 + ABZR86_RS11760 0.72 -0.3 2,638,040 + ABZR86_RS11760 0.72 +2.1 2,638,040 + ABZR86_RS11760 0.72 -0.3 2,638,041 - ABZR86_RS11760 0.72 +0.0 2,638,041 - ABZR86_RS11760 0.72 -1.2 2,638,076 + ABZR86_RS11760 0.74 -0.1 2,638,076 + ABZR86_RS11760 0.74 -1.4 2,638,076 + ABZR86_RS11760 0.74 -0.4 2,638,076 + ABZR86_RS11760 0.74 +0.4 2,638,076 + ABZR86_RS11760 0.74 -0.5 2,638,077 - ABZR86_RS11760 0.74 -0.7 2,638,077 - ABZR86_RS11760 0.74 -0.3 2,638,250 + ABZR86_RS11760 0.84 -0.1 2,638,250 + ABZR86_RS11760 0.84 +0.6 2,638,250 + ABZR86_RS11760 0.84 -0.6 2,638,251 - ABZR86_RS11760 0.84 -0.5 2,638,251 - ABZR86_RS11760 0.84 +0.5 2,638,389 + -0.5 2,638,390 - -0.1 2,638,390 - -1.6 2,638,390 - -0.1 2,638,390 - -0.1 2,638,390 - -0.6 2,638,390 - -1.0 2,638,550 - +1.2 2,639,122 + ABZR86_RS11765 0.32 -0.4 2,639,179 + ABZR86_RS11765 0.35 +0.1 2,639,180 - ABZR86_RS11765 0.35 -1.4 2,639,594 - ABZR86_RS11765 0.57 +0.9 2,639,594 - ABZR86_RS11765 0.57 +0.4 2,639,733 + ABZR86_RS11765 0.65 +0.4 2,639,734 - ABZR86_RS11765 0.65 +0.4 2,639,986 + ABZR86_RS11765 0.78 -1.1 2,640,074 + ABZR86_RS11765 0.83 -0.9 2,640,075 - ABZR86_RS11765 0.83 -0.1 2,640,137 - ABZR86_RS11765 0.86 -0.5 2,640,328 + -0.2 2,640,328 + +0.8 2,640,723 + ABZR86_RS11770 0.33 -0.1 2,640,724 - ABZR86_RS11770 0.33 -0.3 2,640,724 - ABZR86_RS11770 0.33 +0.7 2,640,945 + ABZR86_RS11770 0.55 -0.4 2,640,945 + ABZR86_RS11770 0.55 -1.5 2,640,946 - ABZR86_RS11770 0.55 +0.6 2,640,946 - ABZR86_RS11770 0.55 -0.6 2,641,166 + ABZR86_RS11770 0.78 -1.5 2,641,167 - ABZR86_RS11770 0.78 +0.1
Or see this region's nucleotide sequence