Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08090 and ABZR86_RS08095 are separated by 72 nucleotides ABZR86_RS08095 and ABZR86_RS08100 are separated by 9 nucleotides ABZR86_RS08100 and ABZR86_RS08105 are separated by 83 nucleotides
ABZR86_RS08090: ABZR86_RS08090 - phosphate/phosphite/phosphonate ABC transporter substrate-binding protein, at 1,806,614 to 1,807,639
_RS08090
ABZR86_RS08095: ABZR86_RS08095 - DUF3025 domain-containing protein, at 1,807,712 to 1,808,512
_RS08095
ABZR86_RS08100: ABZR86_RS08100 - 30S ribosomal protein S12 methylthiotransferase RimO, at 1,808,522 to 1,809,856
_RS08100
ABZR86_RS08105: ABZR86_RS08105 - phytanoyl-CoA dioxygenase family protein, at 1,809,940 to 1,810,827
_RS08105
Position (kb)
1808
1809
1810 Strain fitness (log2 ratio)
-1
0
1
2 at 1807.640 kb on - strand at 1807.640 kb on - strand at 1807.669 kb on + strand at 1807.669 kb on + strand at 1807.669 kb on + strand at 1807.669 kb on + strand at 1807.669 kb on + strand at 1807.670 kb on - strand at 1807.758 kb on + strand at 1807.758 kb on + strand at 1807.759 kb on - strand at 1807.759 kb on - strand at 1807.759 kb on - strand at 1808.223 kb on + strand, within ABZR86_RS08095 at 1808.310 kb on + strand, within ABZR86_RS08095 at 1808.310 kb on + strand, within ABZR86_RS08095 at 1808.396 kb on + strand, within ABZR86_RS08095 at 1808.433 kb on + strand at 1808.505 kb on + strand at 1808.505 kb on + strand at 1808.506 kb on - strand at 1809.125 kb on + strand, within ABZR86_RS08100 at 1809.125 kb on + strand, within ABZR86_RS08100 at 1809.125 kb on + strand, within ABZR86_RS08100 at 1809.125 kb on + strand, within ABZR86_RS08100 at 1809.126 kb on - strand, within ABZR86_RS08100 at 1809.126 kb on - strand, within ABZR86_RS08100 at 1809.126 kb on - strand, within ABZR86_RS08100 at 1809.145 kb on - strand, within ABZR86_RS08100 at 1809.151 kb on - strand, within ABZR86_RS08100 at 1809.156 kb on + strand, within ABZR86_RS08100 at 1809.156 kb on + strand, within ABZR86_RS08100 at 1809.156 kb on + strand, within ABZR86_RS08100 at 1809.156 kb on + strand, within ABZR86_RS08100 at 1809.223 kb on - strand, within ABZR86_RS08100 at 1809.252 kb on + strand, within ABZR86_RS08100 at 1809.252 kb on + strand, within ABZR86_RS08100 at 1809.271 kb on - strand, within ABZR86_RS08100 at 1809.438 kb on + strand, within ABZR86_RS08100 at 1809.438 kb on + strand, within ABZR86_RS08100 at 1809.438 kb on + strand, within ABZR86_RS08100 at 1809.438 kb on + strand, within ABZR86_RS08100 at 1809.439 kb on - strand, within ABZR86_RS08100 at 1809.439 kb on - strand, within ABZR86_RS08100 at 1809.439 kb on - strand, within ABZR86_RS08100 at 1809.439 kb on - strand, within ABZR86_RS08100 at 1809.482 kb on - strand, within ABZR86_RS08100 at 1809.547 kb on - strand, within ABZR86_RS08100 at 1809.738 kb on + strand at 1809.738 kb on + strand at 1809.738 kb on + strand at 1809.739 kb on - strand at 1809.756 kb on + strand at 1809.757 kb on - strand at 1809.894 kb on + strand at 1809.895 kb on - strand at 1809.895 kb on - strand at 1809.897 kb on - strand at 1809.962 kb on + strand at 1809.962 kb on + strand at 1809.962 kb on + strand at 1809.963 kb on - strand at 1809.963 kb on - strand at 1809.963 kb on - strand at 1809.963 kb on - strand at 1809.969 kb on - strand at 1809.969 kb on - strand at 1809.969 kb on - strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.992 kb on + strand at 1809.993 kb on + strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1809.993 kb on - strand at 1810.226 kb on + strand, within ABZR86_RS08105 at 1810.227 kb on - strand, within ABZR86_RS08105 at 1810.517 kb on + strand, within ABZR86_RS08105 at 1810.518 kb on - strand, within ABZR86_RS08105 at 1810.577 kb on + strand, within ABZR86_RS08105 at 1810.577 kb on + strand, within ABZR86_RS08105 at 1810.578 kb on - strand, within ABZR86_RS08105 at 1810.578 kb on - strand, within ABZR86_RS08105 at 1810.578 kb on - strand, within ABZR86_RS08105 at 1810.578 kb on - strand, within ABZR86_RS08105 at 1810.776 kb on - strand at 1810.776 kb on - strand at 1810.776 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,807,640 - +0.4 1,807,640 - +0.2 1,807,669 + +0.3 1,807,669 + -0.7 1,807,669 + +0.8 1,807,669 + +0.3 1,807,669 + -0.2 1,807,670 - +0.0 1,807,758 + +0.6 1,807,758 + +0.3 1,807,759 - +1.0 1,807,759 - +0.5 1,807,759 - +0.4 1,808,223 + ABZR86_RS08095 0.64 -0.4 1,808,310 + ABZR86_RS08095 0.75 -0.6 1,808,310 + ABZR86_RS08095 0.75 -0.1 1,808,396 + ABZR86_RS08095 0.85 +0.9 1,808,433 + -0.1 1,808,505 + +0.1 1,808,505 + -0.6 1,808,506 - -0.4 1,809,125 + ABZR86_RS08100 0.45 -0.7 1,809,125 + ABZR86_RS08100 0.45 -0.2 1,809,125 + ABZR86_RS08100 0.45 -0.2 1,809,125 + ABZR86_RS08100 0.45 -0.0 1,809,126 - ABZR86_RS08100 0.45 +0.3 1,809,126 - ABZR86_RS08100 0.45 +0.5 1,809,126 - ABZR86_RS08100 0.45 +0.6 1,809,145 - ABZR86_RS08100 0.47 -0.8 1,809,151 - ABZR86_RS08100 0.47 -0.4 1,809,156 + ABZR86_RS08100 0.47 -0.4 1,809,156 + ABZR86_RS08100 0.47 -0.1 1,809,156 + ABZR86_RS08100 0.47 +0.3 1,809,156 + ABZR86_RS08100 0.47 -0.4 1,809,223 - ABZR86_RS08100 0.53 -0.1 1,809,252 + ABZR86_RS08100 0.55 +0.1 1,809,252 + ABZR86_RS08100 0.55 +1.1 1,809,271 - ABZR86_RS08100 0.56 -1.4 1,809,438 + ABZR86_RS08100 0.69 -0.1 1,809,438 + ABZR86_RS08100 0.69 -0.5 1,809,438 + ABZR86_RS08100 0.69 +1.0 1,809,438 + ABZR86_RS08100 0.69 +0.5 1,809,439 - ABZR86_RS08100 0.69 -0.1 1,809,439 - ABZR86_RS08100 0.69 +0.0 1,809,439 - ABZR86_RS08100 0.69 -0.6 1,809,439 - ABZR86_RS08100 0.69 +0.0 1,809,482 - ABZR86_RS08100 0.72 -0.4 1,809,547 - ABZR86_RS08100 0.77 -0.5 1,809,738 + +0.2 1,809,738 + -1.0 1,809,738 + +0.1 1,809,739 - +0.4 1,809,756 + -0.5 1,809,757 - +0.1 1,809,894 + +0.4 1,809,895 - -0.1 1,809,895 - +0.5 1,809,897 - +0.5 1,809,962 + +0.1 1,809,962 + -0.1 1,809,962 + -0.9 1,809,963 - -0.1 1,809,963 - +0.5 1,809,963 - +0.1 1,809,963 - +0.2 1,809,969 - -0.8 1,809,969 - -1.2 1,809,969 - +1.2 1,809,992 + +1.0 1,809,992 + -0.0 1,809,992 + -0.2 1,809,992 + -0.6 1,809,992 + -0.5 1,809,992 + +0.4 1,809,992 + -0.8 1,809,992 + -0.8 1,809,992 + +0.2 1,809,992 + +0.1 1,809,992 + -0.2 1,809,992 + +0.4 1,809,992 + -0.5 1,809,992 + -0.1 1,809,993 + -0.2 1,809,993 - +0.4 1,809,993 - +0.4 1,809,993 - +0.0 1,809,993 - +0.3 1,809,993 - -0.4 1,809,993 - -1.1 1,809,993 - -0.1 1,809,993 - -0.2 1,809,993 - +0.2 1,809,993 - +1.8 1,809,993 - +0.2 1,809,993 - +0.1 1,810,226 + ABZR86_RS08105 0.32 -1.3 1,810,227 - ABZR86_RS08105 0.32 -0.1 1,810,517 + ABZR86_RS08105 0.65 -0.0 1,810,518 - ABZR86_RS08105 0.65 -0.5 1,810,577 + ABZR86_RS08105 0.72 +0.6 1,810,577 + ABZR86_RS08105 0.72 +0.7 1,810,578 - ABZR86_RS08105 0.72 -1.1 1,810,578 - ABZR86_RS08105 0.72 +0.4 1,810,578 - ABZR86_RS08105 0.72 +0.9 1,810,578 - ABZR86_RS08105 0.72 +0.5 1,810,776 - +0.5 1,810,776 - -0.0 1,810,776 - -1.3
Or see this region's nucleotide sequence