Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07520 and ABZR86_RS07525 are separated by 46 nucleotides ABZR86_RS07525 and ABZR86_RS07530 are separated by 8 nucleotides ABZR86_RS07530 and ABZR86_RS07535 are separated by 5 nucleotides
ABZR86_RS07520: ABZR86_RS07520 - thiamine pyrophosphate-dependent enzyme, at 1,657,361 to 1,659,628
_RS07520
ABZR86_RS07525: ABZR86_RS07525 - hypothetical protein, at 1,659,675 to 1,660,151
_RS07525
ABZR86_RS07530: ABZR86_RS07530 - GNAT family N-acetyltransferase, at 1,660,160 to 1,660,720
_RS07530
ABZR86_RS07535: ABZR86_RS07535 - acyl-CoA dehydrogenase family protein, at 1,660,726 to 1,661,895
_RS07535
Position (kb)
1660
1661 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1659.294 kb on + strand, within ABZR86_RS07520 at 1659.295 kb on - strand, within ABZR86_RS07520 at 1659.375 kb on + strand, within ABZR86_RS07520 at 1659.375 kb on + strand, within ABZR86_RS07520 at 1659.375 kb on + strand, within ABZR86_RS07520 at 1659.376 kb on - strand, within ABZR86_RS07520 at 1659.376 kb on - strand, within ABZR86_RS07520 at 1659.376 kb on - strand, within ABZR86_RS07520 at 1659.376 kb on - strand, within ABZR86_RS07520 at 1659.542 kb on + strand at 1659.542 kb on + strand at 1659.542 kb on + strand at 1659.542 kb on + strand at 1659.543 kb on - strand at 1659.673 kb on + strand at 1659.674 kb on - strand at 1659.807 kb on + strand, within ABZR86_RS07525 at 1659.807 kb on + strand, within ABZR86_RS07525 at 1659.807 kb on + strand, within ABZR86_RS07525 at 1659.816 kb on + strand, within ABZR86_RS07525 at 1659.816 kb on + strand, within ABZR86_RS07525 at 1659.816 kb on + strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.817 kb on - strand, within ABZR86_RS07525 at 1659.949 kb on + strand, within ABZR86_RS07525 at 1659.949 kb on + strand, within ABZR86_RS07525 at 1659.949 kb on + strand, within ABZR86_RS07525 at 1659.950 kb on - strand, within ABZR86_RS07525 at 1659.950 kb on - strand, within ABZR86_RS07525 at 1659.950 kb on - strand, within ABZR86_RS07525 at 1660.386 kb on + strand, within ABZR86_RS07530 at 1660.387 kb on - strand, within ABZR86_RS07530 at 1660.593 kb on + strand, within ABZR86_RS07530 at 1660.593 kb on + strand, within ABZR86_RS07530 at 1660.594 kb on - strand, within ABZR86_RS07530 at 1660.594 kb on - strand, within ABZR86_RS07530 at 1660.705 kb on + strand at 1660.793 kb on + strand at 1660.793 kb on + strand at 1660.793 kb on + strand at 1660.794 kb on - strand at 1660.794 kb on - strand at 1660.846 kb on - strand, within ABZR86_RS07535 at 1661.087 kb on + strand, within ABZR86_RS07535 at 1661.088 kb on - strand, within ABZR86_RS07535 at 1661.368 kb on - strand, within ABZR86_RS07535 at 1661.531 kb on + strand, within ABZR86_RS07535 at 1661.531 kb on + strand, within ABZR86_RS07535 at 1661.531 kb on + strand, within ABZR86_RS07535 at 1661.531 kb on + strand, within ABZR86_RS07535 at 1661.565 kb on - strand, within ABZR86_RS07535 at 1661.573 kb on + strand, within ABZR86_RS07535 at 1661.574 kb on - strand, within ABZR86_RS07535 at 1661.574 kb on - strand, within ABZR86_RS07535 at 1661.654 kb on + strand, within ABZR86_RS07535 at 1661.654 kb on + strand, within ABZR86_RS07535 at 1661.655 kb on - strand, within ABZR86_RS07535 at 1661.655 kb on - strand, within ABZR86_RS07535 at 1661.685 kb on - strand, within ABZR86_RS07535 at 1661.685 kb on - strand, within ABZR86_RS07535
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,659,294 + ABZR86_RS07520 0.85 -0.7 1,659,295 - ABZR86_RS07520 0.85 +0.0 1,659,375 + ABZR86_RS07520 0.89 -0.3 1,659,375 + ABZR86_RS07520 0.89 +1.5 1,659,375 + ABZR86_RS07520 0.89 +0.0 1,659,376 - ABZR86_RS07520 0.89 -0.2 1,659,376 - ABZR86_RS07520 0.89 -0.2 1,659,376 - ABZR86_RS07520 0.89 +0.0 1,659,376 - ABZR86_RS07520 0.89 +0.0 1,659,542 + +0.7 1,659,542 + -0.5 1,659,542 + +0.2 1,659,542 + -0.0 1,659,543 - +0.5 1,659,673 + +0.2 1,659,674 - -0.4 1,659,807 + ABZR86_RS07525 0.28 +0.7 1,659,807 + ABZR86_RS07525 0.28 -0.6 1,659,807 + ABZR86_RS07525 0.28 -0.6 1,659,816 + ABZR86_RS07525 0.30 +0.1 1,659,816 + ABZR86_RS07525 0.30 -0.1 1,659,816 + ABZR86_RS07525 0.30 +0.9 1,659,817 - ABZR86_RS07525 0.30 +0.2 1,659,817 - ABZR86_RS07525 0.30 -1.3 1,659,817 - ABZR86_RS07525 0.30 +0.2 1,659,817 - ABZR86_RS07525 0.30 -1.5 1,659,817 - ABZR86_RS07525 0.30 -0.4 1,659,817 - ABZR86_RS07525 0.30 -0.1 1,659,817 - ABZR86_RS07525 0.30 +0.6 1,659,949 + ABZR86_RS07525 0.57 -1.9 1,659,949 + ABZR86_RS07525 0.57 -0.3 1,659,949 + ABZR86_RS07525 0.57 -0.3 1,659,950 - ABZR86_RS07525 0.58 +0.6 1,659,950 - ABZR86_RS07525 0.58 +2.0 1,659,950 - ABZR86_RS07525 0.58 -2.0 1,660,386 + ABZR86_RS07530 0.40 +0.3 1,660,387 - ABZR86_RS07530 0.40 +1.4 1,660,593 + ABZR86_RS07530 0.77 -0.3 1,660,593 + ABZR86_RS07530 0.77 -0.7 1,660,594 - ABZR86_RS07530 0.77 +0.1 1,660,594 - ABZR86_RS07530 0.77 +0.5 1,660,705 + -0.4 1,660,793 + +0.5 1,660,793 + -0.3 1,660,793 + -0.3 1,660,794 - +0.2 1,660,794 - +0.2 1,660,846 - ABZR86_RS07535 0.10 -2.7 1,661,087 + ABZR86_RS07535 0.31 +0.8 1,661,088 - ABZR86_RS07535 0.31 -0.1 1,661,368 - ABZR86_RS07535 0.55 -0.4 1,661,531 + ABZR86_RS07535 0.69 -0.2 1,661,531 + ABZR86_RS07535 0.69 -0.2 1,661,531 + ABZR86_RS07535 0.69 -0.9 1,661,531 + ABZR86_RS07535 0.69 +0.6 1,661,565 - ABZR86_RS07535 0.72 +0.9 1,661,573 + ABZR86_RS07535 0.72 +0.1 1,661,574 - ABZR86_RS07535 0.72 +0.2 1,661,574 - ABZR86_RS07535 0.72 -0.2 1,661,654 + ABZR86_RS07535 0.79 +0.0 1,661,654 + ABZR86_RS07535 0.79 -0.2 1,661,655 - ABZR86_RS07535 0.79 +0.1 1,661,655 - ABZR86_RS07535 0.79 -0.7 1,661,685 - ABZR86_RS07535 0.82 +0.4 1,661,685 - ABZR86_RS07535 0.82 -0.1
Or see this region's nucleotide sequence