Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05600 and ABZR86_RS05605 are separated by 1 nucleotides ABZR86_RS05605 and ABZR86_RS05610 are separated by 228 nucleotides
ABZR86_RS05600: ABZR86_RS05600 - carbamoyl-phosphate synthase large subunit, at 1,264,615 to 1,267,842
_RS05600
ABZR86_RS05605: ABZR86_RS05605 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 1,267,844 to 1,268,971
_RS05605
ABZR86_RS05610: ABZR86_RS05610 - 2OG-Fe(II) oxygenase, at 1,269,200 to 1,269,895
_RS05610
Position (kb)
1267
1268
1269 Strain fitness (log2 ratio)
-1
0
1
2 at 1268.499 kb on - strand, within ABZR86_RS05605 at 1269.070 kb on + strand at 1269.070 kb on + strand at 1269.070 kb on + strand at 1269.070 kb on + strand at 1269.071 kb on - strand at 1269.071 kb on - strand at 1269.071 kb on - strand at 1269.071 kb on - strand at 1269.107 kb on + strand at 1269.108 kb on - strand at 1269.135 kb on + strand at 1269.136 kb on - strand at 1269.163 kb on + strand at 1269.163 kb on + strand at 1269.164 kb on - strand at 1269.168 kb on + strand at 1269.168 kb on + strand at 1269.169 kb on - strand at 1269.169 kb on - strand at 1269.169 kb on - strand at 1269.248 kb on - strand at 1269.254 kb on - strand at 1269.254 kb on - strand at 1269.476 kb on + strand, within ABZR86_RS05610 at 1269.532 kb on + strand, within ABZR86_RS05610 at 1269.533 kb on - strand, within ABZR86_RS05610 at 1269.533 kb on - strand, within ABZR86_RS05610 at 1269.533 kb on - strand, within ABZR86_RS05610 at 1269.569 kb on + strand, within ABZR86_RS05610 at 1269.570 kb on - strand, within ABZR86_RS05610 at 1269.570 kb on - strand, within ABZR86_RS05610 at 1269.570 kb on - strand, within ABZR86_RS05610 at 1269.671 kb on + strand, within ABZR86_RS05610 at 1269.671 kb on + strand, within ABZR86_RS05610 at 1269.672 kb on - strand, within ABZR86_RS05610 at 1269.672 kb on - strand, within ABZR86_RS05610 at 1269.729 kb on - strand, within ABZR86_RS05610 at 1269.729 kb on - strand, within ABZR86_RS05610 at 1269.940 kb on + strand at 1269.941 kb on - strand at 1269.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,268,499 - ABZR86_RS05605 0.58 +0.0 1,269,070 + +0.4 1,269,070 + -1.7 1,269,070 + +1.6 1,269,070 + -0.7 1,269,071 - -0.1 1,269,071 - +0.3 1,269,071 - +0.4 1,269,071 - -0.3 1,269,107 + +0.1 1,269,108 - -0.0 1,269,135 + +0.3 1,269,136 - +0.1 1,269,163 + -1.5 1,269,163 + -0.5 1,269,164 - +0.3 1,269,168 + +0.3 1,269,168 + +0.1 1,269,169 - +1.0 1,269,169 - +0.5 1,269,169 - -0.0 1,269,248 - +0.7 1,269,254 - +0.8 1,269,254 - +1.0 1,269,476 + ABZR86_RS05610 0.40 +1.2 1,269,532 + ABZR86_RS05610 0.48 +0.5 1,269,533 - ABZR86_RS05610 0.48 +0.6 1,269,533 - ABZR86_RS05610 0.48 +0.6 1,269,533 - ABZR86_RS05610 0.48 +1.0 1,269,569 + ABZR86_RS05610 0.53 +1.0 1,269,570 - ABZR86_RS05610 0.53 +0.4 1,269,570 - ABZR86_RS05610 0.53 -0.2 1,269,570 - ABZR86_RS05610 0.53 +0.6 1,269,671 + ABZR86_RS05610 0.68 +0.8 1,269,671 + ABZR86_RS05610 0.68 +0.9 1,269,672 - ABZR86_RS05610 0.68 +1.9 1,269,672 - ABZR86_RS05610 0.68 +1.0 1,269,729 - ABZR86_RS05610 0.76 +0.8 1,269,729 - ABZR86_RS05610 0.76 +1.2 1,269,940 + +0.2 1,269,941 - -0.1 1,269,941 - +0.1
Or see this region's nucleotide sequence