Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05070 and ABZR86_RS05075 are separated by 5 nucleotides ABZR86_RS05075 and ABZR86_RS05080 are separated by 6 nucleotides ABZR86_RS05080 and ABZR86_RS05085 are separated by 323 nucleotides
ABZR86_RS05070: ABZR86_RS05070 - DUF4880 domain-containing protein, at 1,144,972 to 1,145,943
_RS05070
ABZR86_RS05075: ABZR86_RS05075 - RNA polymerase sigma factor, at 1,145,949 to 1,146,494
_RS05075
ABZR86_RS05080: ABZR86_RS05080 - STN domain-containing protein, at 1,146,501 to 1,147,106
_RS05080
ABZR86_RS05085: ABZR86_RS05085 - hypothetical protein, at 1,147,430 to 1,147,945
_RS05085
Position (kb)
1145
1146
1147 Strain fitness (log2 ratio)
-2
-1
0
1 at 1144.956 kb on - strand at 1145.156 kb on + strand, within ABZR86_RS05070 at 1145.255 kb on + strand, within ABZR86_RS05070 at 1145.300 kb on + strand, within ABZR86_RS05070 at 1145.520 kb on + strand, within ABZR86_RS05070 at 1145.521 kb on - strand, within ABZR86_RS05070 at 1145.521 kb on - strand, within ABZR86_RS05070 at 1145.521 kb on - strand, within ABZR86_RS05070 at 1145.944 kb on - strand at 1146.140 kb on + strand, within ABZR86_RS05075 at 1146.140 kb on + strand, within ABZR86_RS05075 at 1146.140 kb on + strand, within ABZR86_RS05075 at 1146.140 kb on + strand, within ABZR86_RS05075 at 1146.141 kb on - strand, within ABZR86_RS05075 at 1146.224 kb on + strand, within ABZR86_RS05075 at 1146.225 kb on - strand, within ABZR86_RS05075 at 1146.260 kb on - strand, within ABZR86_RS05075 at 1146.317 kb on - strand, within ABZR86_RS05075 at 1146.373 kb on + strand, within ABZR86_RS05075 at 1146.373 kb on + strand, within ABZR86_RS05075 at 1146.374 kb on - strand, within ABZR86_RS05075 at 1146.387 kb on + strand, within ABZR86_RS05075 at 1146.387 kb on + strand, within ABZR86_RS05075 at 1146.387 kb on + strand, within ABZR86_RS05075 at 1146.387 kb on + strand, within ABZR86_RS05075 at 1146.388 kb on - strand, within ABZR86_RS05075 at 1146.688 kb on - strand, within ABZR86_RS05080 at 1146.776 kb on - strand, within ABZR86_RS05080 at 1146.889 kb on + strand, within ABZR86_RS05080 at 1146.889 kb on + strand, within ABZR86_RS05080 at 1146.889 kb on + strand, within ABZR86_RS05080 at 1146.889 kb on + strand, within ABZR86_RS05080 at 1147.180 kb on + strand at 1147.187 kb on + strand at 1147.188 kb on - strand at 1147.188 kb on - strand at 1147.239 kb on + strand at 1147.239 kb on + strand at 1147.239 kb on + strand at 1147.240 kb on - strand at 1147.240 kb on - strand at 1147.241 kb on + strand at 1147.241 kb on + strand at 1147.242 kb on - strand at 1147.242 kb on - strand at 1147.242 kb on - strand at 1147.291 kb on - strand at 1147.291 kb on - strand at 1147.295 kb on - strand at 1147.295 kb on - strand at 1147.323 kb on + strand at 1147.352 kb on + strand at 1147.427 kb on + strand at 1147.431 kb on + strand at 1147.432 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 1,144,956 - +0.6 1,145,156 + ABZR86_RS05070 0.19 +0.6 1,145,255 + ABZR86_RS05070 0.29 +0.0 1,145,300 + ABZR86_RS05070 0.34 -0.2 1,145,520 + ABZR86_RS05070 0.56 -0.1 1,145,521 - ABZR86_RS05070 0.56 -0.1 1,145,521 - ABZR86_RS05070 0.56 +0.0 1,145,521 - ABZR86_RS05070 0.56 -0.9 1,145,944 - -0.1 1,146,140 + ABZR86_RS05075 0.35 -1.8 1,146,140 + ABZR86_RS05075 0.35 +0.2 1,146,140 + ABZR86_RS05075 0.35 +1.4 1,146,140 + ABZR86_RS05075 0.35 -0.4 1,146,141 - ABZR86_RS05075 0.35 +0.1 1,146,224 + ABZR86_RS05075 0.50 -0.0 1,146,225 - ABZR86_RS05075 0.51 -0.2 1,146,260 - ABZR86_RS05075 0.57 -0.7 1,146,317 - ABZR86_RS05075 0.67 +0.0 1,146,373 + ABZR86_RS05075 0.78 -0.1 1,146,373 + ABZR86_RS05075 0.78 -0.8 1,146,374 - ABZR86_RS05075 0.78 -0.7 1,146,387 + ABZR86_RS05075 0.80 -0.1 1,146,387 + ABZR86_RS05075 0.80 -0.0 1,146,387 + ABZR86_RS05075 0.80 +0.5 1,146,387 + ABZR86_RS05075 0.80 +1.0 1,146,388 - ABZR86_RS05075 0.80 -0.4 1,146,688 - ABZR86_RS05080 0.31 -0.3 1,146,776 - ABZR86_RS05080 0.45 -0.1 1,146,889 + ABZR86_RS05080 0.64 -0.9 1,146,889 + ABZR86_RS05080 0.64 -1.7 1,146,889 + ABZR86_RS05080 0.64 +0.7 1,146,889 + ABZR86_RS05080 0.64 -0.6 1,147,180 + +0.5 1,147,187 + +0.4 1,147,188 - -1.7 1,147,188 - +0.5 1,147,239 + -0.6 1,147,239 + -0.2 1,147,239 + -0.3 1,147,240 - -0.4 1,147,240 - +0.1 1,147,241 + +0.5 1,147,241 + -0.7 1,147,242 - -0.2 1,147,242 - +0.0 1,147,242 - +1.2 1,147,291 - +0.5 1,147,291 - -2.2 1,147,295 - -2.1 1,147,295 - -0.0 1,147,323 + -0.4 1,147,352 + +0.4 1,147,427 + +0.3 1,147,431 + -0.6 1,147,432 - +0.2
Or see this region's nucleotide sequence