Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03050 and ABZR86_RS03055 are separated by 120 nucleotides ABZR86_RS03055 and ABZR86_RS03060 are separated by 50 nucleotides
ABZR86_RS03050: ABZR86_RS03050 - excinuclease ABC subunit UvrA, at 621,627 to 624,035
_RS03050
ABZR86_RS03055: ABZR86_RS03055 - VOC family protein, at 624,156 to 624,566
_RS03055
ABZR86_RS03060: ABZR86_RS03060 - helix-turn-helix transcriptional regulator, at 624,617 to 625,066
_RS03060
Position (kb) 624
625 Strain fitness (log2 ratio) -1
0
1 at 623.272 kb on + strand, within ABZR86_RS03050 at 623.273 kb on - strand, within ABZR86_RS03050 at 623.273 kb on - strand, within ABZR86_RS03050 at 623.273 kb on - strand, within ABZR86_RS03050 at 623.317 kb on + strand, within ABZR86_RS03050 at 623.317 kb on + strand, within ABZR86_RS03050 at 623.318 kb on - strand, within ABZR86_RS03050 at 623.423 kb on - strand, within ABZR86_RS03050 at 623.470 kb on + strand, within ABZR86_RS03050 at 623.470 kb on + strand, within ABZR86_RS03050 at 623.471 kb on - strand, within ABZR86_RS03050 at 623.471 kb on - strand, within ABZR86_RS03050 at 623.648 kb on + strand, within ABZR86_RS03050 at 623.836 kb on + strand at 623.836 kb on + strand at 623.836 kb on + strand at 623.836 kb on + strand at 623.837 kb on - strand at 623.837 kb on - strand at 623.837 kb on - strand at 623.837 kb on - strand at 624.056 kb on + strand at 624.056 kb on + strand at 624.057 kb on - strand at 624.057 kb on - strand at 624.057 kb on - strand at 624.057 kb on - strand at 624.138 kb on + strand at 624.139 kb on - strand at 624.139 kb on - strand at 624.139 kb on - strand at 624.397 kb on + strand, within ABZR86_RS03055 at 624.624 kb on - strand at 624.879 kb on + strand, within ABZR86_RS03060 at 624.880 kb on - strand, within ABZR86_RS03060 at 624.880 kb on - strand, within ABZR86_RS03060 at 624.880 kb on - strand, within ABZR86_RS03060 at 624.984 kb on + strand, within ABZR86_RS03060 at 625.175 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 623,272 + ABZR86_RS03050 0.68 +0.4 623,273 - ABZR86_RS03050 0.68 -0.4 623,273 - ABZR86_RS03050 0.68 +0.9 623,273 - ABZR86_RS03050 0.68 -0.0 623,317 + ABZR86_RS03050 0.70 -0.1 623,317 + ABZR86_RS03050 0.70 +0.7 623,318 - ABZR86_RS03050 0.70 -0.0 623,423 - ABZR86_RS03050 0.75 -0.2 623,470 + ABZR86_RS03050 0.77 +0.5 623,470 + ABZR86_RS03050 0.77 +0.1 623,471 - ABZR86_RS03050 0.77 +0.2 623,471 - ABZR86_RS03050 0.77 -0.1 623,648 + ABZR86_RS03050 0.84 -0.7 623,836 + -1.0 623,836 + +0.8 623,836 + +0.4 623,836 + -0.0 623,837 - +1.0 623,837 - -0.8 623,837 - +1.0 623,837 - -0.4 624,056 + +1.1 624,056 + -0.7 624,057 - -0.3 624,057 - +0.9 624,057 - +0.1 624,057 - -0.9 624,138 + +0.1 624,139 - +0.5 624,139 - +0.4 624,139 - -1.2 624,397 + ABZR86_RS03055 0.59 -0.2 624,624 - +0.0 624,879 + ABZR86_RS03060 0.58 +0.8 624,880 - ABZR86_RS03060 0.58 -0.2 624,880 - ABZR86_RS03060 0.58 -0.1 624,880 - ABZR86_RS03060 0.58 +0.3 624,984 + ABZR86_RS03060 0.82 +0.4 625,175 - -0.2
Or see this region's nucleotide sequence