Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00430 and ABZR86_RS00435 are separated by 136 nucleotides ABZR86_RS00435 and ABZR86_RS00440 are separated by 103 nucleotides ABZR86_RS00440 and ABZR86_RS00445 are separated by 103 nucleotides
ABZR86_RS00430: ABZR86_RS00430 - PhzF family phenazine biosynthesis protein, at 82,183 to 83,082
_RS00430
ABZR86_RS00435: ABZR86_RS00435 - rhomboid family intramembrane serine protease, at 83,219 to 83,824
_RS00435
ABZR86_RS00440: ABZR86_RS00440 - hypothetical protein, at 83,928 to 84,305
_RS00440
ABZR86_RS00445: ABZR86_RS00445 - aminopeptidase, at 84,409 to 85,437
_RS00445
Position (kb) 83
84 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 82.314 kb on + strand, within ABZR86_RS00430 at 82.314 kb on + strand, within ABZR86_RS00430 at 82.315 kb on - strand, within ABZR86_RS00430 at 82.315 kb on - strand, within ABZR86_RS00430 at 82.315 kb on - strand, within ABZR86_RS00430 at 82.316 kb on + strand, within ABZR86_RS00430 at 82.356 kb on + strand, within ABZR86_RS00430 at 82.357 kb on - strand, within ABZR86_RS00430 at 82.358 kb on + strand, within ABZR86_RS00430 at 82.359 kb on - strand, within ABZR86_RS00430 at 82.359 kb on - strand, within ABZR86_RS00430 at 82.359 kb on - strand, within ABZR86_RS00430 at 82.445 kb on + strand, within ABZR86_RS00430 at 82.613 kb on + strand, within ABZR86_RS00430 at 82.613 kb on + strand, within ABZR86_RS00430 at 82.614 kb on - strand, within ABZR86_RS00430 at 82.633 kb on + strand, within ABZR86_RS00430 at 82.720 kb on + strand, within ABZR86_RS00430 at 82.720 kb on + strand, within ABZR86_RS00430 at 82.720 kb on + strand, within ABZR86_RS00430 at 82.720 kb on + strand, within ABZR86_RS00430 at 82.721 kb on - strand, within ABZR86_RS00430 at 82.721 kb on - strand, within ABZR86_RS00430 at 82.721 kb on - strand, within ABZR86_RS00430 at 82.721 kb on - strand, within ABZR86_RS00430 at 82.844 kb on - strand, within ABZR86_RS00430 at 82.844 kb on - strand, within ABZR86_RS00430 at 82.902 kb on - strand, within ABZR86_RS00430 at 82.902 kb on - strand, within ABZR86_RS00430 at 83.116 kb on - strand at 83.128 kb on + strand at 83.128 kb on + strand at 83.128 kb on + strand at 83.129 kb on - strand at 83.129 kb on - strand at 83.129 kb on - strand at 83.216 kb on + strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.217 kb on - strand at 83.340 kb on - strand, within ABZR86_RS00435 at 83.340 kb on - strand, within ABZR86_RS00435 at 83.357 kb on + strand, within ABZR86_RS00435 at 83.357 kb on + strand, within ABZR86_RS00435 at 83.381 kb on + strand, within ABZR86_RS00435 at 83.381 kb on + strand, within ABZR86_RS00435 at 83.381 kb on + strand, within ABZR86_RS00435 at 83.381 kb on + strand, within ABZR86_RS00435 at 83.381 kb on + strand, within ABZR86_RS00435 at 83.382 kb on - strand, within ABZR86_RS00435 at 83.382 kb on - strand, within ABZR86_RS00435 at 83.382 kb on - strand, within ABZR86_RS00435 at 83.382 kb on - strand, within ABZR86_RS00435 at 83.441 kb on + strand, within ABZR86_RS00435 at 83.442 kb on - strand, within ABZR86_RS00435 at 83.480 kb on + strand, within ABZR86_RS00435 at 83.654 kb on + strand, within ABZR86_RS00435 at 83.654 kb on + strand, within ABZR86_RS00435 at 83.655 kb on - strand, within ABZR86_RS00435 at 83.666 kb on + strand, within ABZR86_RS00435 at 83.666 kb on + strand, within ABZR86_RS00435 at 83.666 kb on + strand, within ABZR86_RS00435 at 83.745 kb on - strand, within ABZR86_RS00435 at 83.745 kb on - strand, within ABZR86_RS00435 at 83.897 kb on - strand at 83.988 kb on + strand, within ABZR86_RS00440 at 83.988 kb on + strand, within ABZR86_RS00440 at 83.988 kb on + strand, within ABZR86_RS00440 at 83.989 kb on - strand, within ABZR86_RS00440 at 83.991 kb on + strand, within ABZR86_RS00440 at 83.992 kb on - strand, within ABZR86_RS00440 at 83.992 kb on - strand, within ABZR86_RS00440 at 84.004 kb on - strand, within ABZR86_RS00440 at 84.009 kb on + strand, within ABZR86_RS00440 at 84.009 kb on + strand, within ABZR86_RS00440 at 84.009 kb on + strand, within ABZR86_RS00440 at 84.009 kb on + strand, within ABZR86_RS00440 at 84.010 kb on - strand, within ABZR86_RS00440 at 84.010 kb on - strand, within ABZR86_RS00440 at 84.027 kb on + strand, within ABZR86_RS00440 at 84.028 kb on - strand, within ABZR86_RS00440 at 84.042 kb on + strand, within ABZR86_RS00440 at 84.043 kb on - strand, within ABZR86_RS00440 at 84.069 kb on + strand, within ABZR86_RS00440 at 84.069 kb on + strand, within ABZR86_RS00440 at 84.070 kb on - strand, within ABZR86_RS00440 at 84.081 kb on + strand, within ABZR86_RS00440 at 84.081 kb on + strand, within ABZR86_RS00440 at 84.082 kb on - strand, within ABZR86_RS00440 at 84.084 kb on + strand, within ABZR86_RS00440 at 84.096 kb on + strand, within ABZR86_RS00440 at 84.097 kb on - strand, within ABZR86_RS00440 at 84.097 kb on - strand, within ABZR86_RS00440 at 84.097 kb on - strand, within ABZR86_RS00440 at 84.100 kb on - strand, within ABZR86_RS00440 at 84.100 kb on - strand, within ABZR86_RS00440 at 84.111 kb on + strand, within ABZR86_RS00440 at 84.114 kb on + strand, within ABZR86_RS00440 at 84.114 kb on + strand, within ABZR86_RS00440 at 84.114 kb on + strand, within ABZR86_RS00440 at 84.115 kb on - strand, within ABZR86_RS00440 at 84.115 kb on - strand, within ABZR86_RS00440 at 84.126 kb on + strand, within ABZR86_RS00440 at 84.165 kb on + strand, within ABZR86_RS00440 at 84.166 kb on - strand, within ABZR86_RS00440 at 84.208 kb on - strand, within ABZR86_RS00440 at 84.208 kb on - strand, within ABZR86_RS00440 at 84.445 kb on + strand at 84.446 kb on - strand at 84.446 kb on - strand at 84.446 kb on - strand at 84.448 kb on + strand at 84.448 kb on + strand at 84.448 kb on + strand at 84.448 kb on + strand at 84.449 kb on - strand at 84.449 kb on - strand at 84.449 kb on - strand at 84.625 kb on + strand, within ABZR86_RS00445 at 84.625 kb on + strand, within ABZR86_RS00445 at 84.625 kb on + strand, within ABZR86_RS00445 at 84.626 kb on - strand, within ABZR86_RS00445 at 84.626 kb on - strand, within ABZR86_RS00445 at 84.647 kb on - strand, within ABZR86_RS00445 at 84.647 kb on - strand, within ABZR86_RS00445 at 84.679 kb on + strand, within ABZR86_RS00445 at 84.730 kb on + strand, within ABZR86_RS00445 at 84.739 kb on + strand, within ABZR86_RS00445 at 84.802 kb on + strand, within ABZR86_RS00445 at 84.802 kb on + strand, within ABZR86_RS00445 at 84.802 kb on + strand, within ABZR86_RS00445 at 84.802 kb on + strand, within ABZR86_RS00445 at 84.802 kb on + strand, within ABZR86_RS00445 at 84.803 kb on - strand, within ABZR86_RS00445 at 84.803 kb on - strand, within ABZR86_RS00445 at 84.823 kb on + strand, within ABZR86_RS00445 at 84.823 kb on + strand, within ABZR86_RS00445
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 82,314 + ABZR86_RS00430 0.15 -1.3 82,314 + ABZR86_RS00430 0.15 -0.7 82,315 - ABZR86_RS00430 0.15 -0.2 82,315 - ABZR86_RS00430 0.15 -0.4 82,315 - ABZR86_RS00430 0.15 -0.4 82,316 + ABZR86_RS00430 0.15 +0.5 82,356 + ABZR86_RS00430 0.19 +0.6 82,357 - ABZR86_RS00430 0.19 +0.3 82,358 + ABZR86_RS00430 0.19 +1.1 82,359 - ABZR86_RS00430 0.20 -0.1 82,359 - ABZR86_RS00430 0.20 -0.8 82,359 - ABZR86_RS00430 0.20 -0.8 82,445 + ABZR86_RS00430 0.29 -0.5 82,613 + ABZR86_RS00430 0.48 +0.3 82,613 + ABZR86_RS00430 0.48 -0.0 82,614 - ABZR86_RS00430 0.48 -0.7 82,633 + ABZR86_RS00430 0.50 +0.2 82,720 + ABZR86_RS00430 0.60 -0.0 82,720 + ABZR86_RS00430 0.60 +0.1 82,720 + ABZR86_RS00430 0.60 +0.3 82,720 + ABZR86_RS00430 0.60 +0.2 82,721 - ABZR86_RS00430 0.60 -0.1 82,721 - ABZR86_RS00430 0.60 +1.1 82,721 - ABZR86_RS00430 0.60 +0.1 82,721 - ABZR86_RS00430 0.60 +0.7 82,844 - ABZR86_RS00430 0.73 +0.8 82,844 - ABZR86_RS00430 0.73 +0.4 82,902 - ABZR86_RS00430 0.80 -0.1 82,902 - ABZR86_RS00430 0.80 +0.6 83,116 - +0.0 83,128 + +0.0 83,128 + +0.3 83,128 + +0.1 83,129 - -0.0 83,129 - +0.1 83,129 - -0.0 83,216 + -0.3 83,217 - -0.3 83,217 - -0.0 83,217 - +0.1 83,217 - -0.4 83,217 - -0.1 83,217 - -0.6 83,217 - -0.6 83,217 - -1.0 83,340 - ABZR86_RS00435 0.20 -0.6 83,340 - ABZR86_RS00435 0.20 -0.1 83,357 + ABZR86_RS00435 0.23 -2.8 83,357 + ABZR86_RS00435 0.23 +1.1 83,381 + ABZR86_RS00435 0.27 -0.4 83,381 + ABZR86_RS00435 0.27 -1.5 83,381 + ABZR86_RS00435 0.27 +0.1 83,381 + ABZR86_RS00435 0.27 +0.3 83,381 + ABZR86_RS00435 0.27 +0.9 83,382 - ABZR86_RS00435 0.27 -0.4 83,382 - ABZR86_RS00435 0.27 -0.7 83,382 - ABZR86_RS00435 0.27 +0.2 83,382 - ABZR86_RS00435 0.27 -0.1 83,441 + ABZR86_RS00435 0.37 +0.6 83,442 - ABZR86_RS00435 0.37 -0.4 83,480 + ABZR86_RS00435 0.43 -0.8 83,654 + ABZR86_RS00435 0.72 -0.2 83,654 + ABZR86_RS00435 0.72 -0.7 83,655 - ABZR86_RS00435 0.72 +0.3 83,666 + ABZR86_RS00435 0.74 -1.5 83,666 + ABZR86_RS00435 0.74 +1.8 83,666 + ABZR86_RS00435 0.74 -0.3 83,745 - ABZR86_RS00435 0.87 -0.1 83,745 - ABZR86_RS00435 0.87 -0.3 83,897 - +0.9 83,988 + ABZR86_RS00440 0.16 -0.4 83,988 + ABZR86_RS00440 0.16 +0.2 83,988 + ABZR86_RS00440 0.16 -0.5 83,989 - ABZR86_RS00440 0.16 -0.2 83,991 + ABZR86_RS00440 0.17 -0.0 83,992 - ABZR86_RS00440 0.17 -0.3 83,992 - ABZR86_RS00440 0.17 -0.5 84,004 - ABZR86_RS00440 0.20 -0.2 84,009 + ABZR86_RS00440 0.21 +0.6 84,009 + ABZR86_RS00440 0.21 -0.4 84,009 + ABZR86_RS00440 0.21 +0.4 84,009 + ABZR86_RS00440 0.21 -0.2 84,010 - ABZR86_RS00440 0.22 +0.3 84,010 - ABZR86_RS00440 0.22 -0.3 84,027 + ABZR86_RS00440 0.26 -0.3 84,028 - ABZR86_RS00440 0.26 +1.2 84,042 + ABZR86_RS00440 0.30 +0.3 84,043 - ABZR86_RS00440 0.30 -1.1 84,069 + ABZR86_RS00440 0.37 +0.6 84,069 + ABZR86_RS00440 0.37 +0.0 84,070 - ABZR86_RS00440 0.38 -0.2 84,081 + ABZR86_RS00440 0.40 -1.2 84,081 + ABZR86_RS00440 0.40 +0.3 84,082 - ABZR86_RS00440 0.41 -0.3 84,084 + ABZR86_RS00440 0.41 -1.0 84,096 + ABZR86_RS00440 0.44 +1.1 84,097 - ABZR86_RS00440 0.45 +0.5 84,097 - ABZR86_RS00440 0.45 -0.7 84,097 - ABZR86_RS00440 0.45 +0.4 84,100 - ABZR86_RS00440 0.46 +0.2 84,100 - ABZR86_RS00440 0.46 -1.7 84,111 + ABZR86_RS00440 0.48 +0.9 84,114 + ABZR86_RS00440 0.49 -0.1 84,114 + ABZR86_RS00440 0.49 +0.3 84,114 + ABZR86_RS00440 0.49 -0.6 84,115 - ABZR86_RS00440 0.49 +0.7 84,115 - ABZR86_RS00440 0.49 -0.4 84,126 + ABZR86_RS00440 0.52 +0.4 84,165 + ABZR86_RS00440 0.63 +0.4 84,166 - ABZR86_RS00440 0.63 -0.3 84,208 - ABZR86_RS00440 0.74 -0.9 84,208 - ABZR86_RS00440 0.74 -0.6 84,445 + +0.5 84,446 - +0.2 84,446 - -0.4 84,446 - -1.4 84,448 + -0.1 84,448 + -0.5 84,448 + -0.4 84,448 + -0.7 84,449 - +0.0 84,449 - -0.8 84,449 - -0.6 84,625 + ABZR86_RS00445 0.21 +0.2 84,625 + ABZR86_RS00445 0.21 -0.3 84,625 + ABZR86_RS00445 0.21 +0.5 84,626 - ABZR86_RS00445 0.21 -0.0 84,626 - ABZR86_RS00445 0.21 -0.2 84,647 - ABZR86_RS00445 0.23 +0.3 84,647 - ABZR86_RS00445 0.23 +1.0 84,679 + ABZR86_RS00445 0.26 +0.4 84,730 + ABZR86_RS00445 0.31 -0.2 84,739 + ABZR86_RS00445 0.32 -0.1 84,802 + ABZR86_RS00445 0.38 -0.7 84,802 + ABZR86_RS00445 0.38 -1.6 84,802 + ABZR86_RS00445 0.38 +0.2 84,802 + ABZR86_RS00445 0.38 +1.0 84,802 + ABZR86_RS00445 0.38 -1.7 84,803 - ABZR86_RS00445 0.38 +0.2 84,803 - ABZR86_RS00445 0.38 -0.2 84,823 + ABZR86_RS00445 0.40 +0.2 84,823 + ABZR86_RS00445 0.40 +0.8
Or see this region's nucleotide sequence