Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03758

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
3,927,140	+		CCNA_03757	0.16	-1.7
3,927,140	+		CCNA_03757	0.16	-1.9
3,927,140	+		CCNA_03757	0.16	-0.5
3,927,143	-		CCNA_03757	0.16	-1.7
3,927,145	+		CCNA_03757	0.16	-2.6
3,927,145	-		CCNA_03757	0.16	-0.8
3,927,148	-		CCNA_03757	0.16	+0.4
3,927,219	-		CCNA_03757	0.23	-1.5
3,927,232	-		CCNA_03757	0.24	-0.8
3,927,303	+		CCNA_03757	0.31	+0.9
3,927,305	+		CCNA_03757	0.31	+1.1
3,927,314	+		CCNA_03757	0.32	-0.1
3,927,327	+		CCNA_03757	0.33	-2.0
3,927,327	+		CCNA_03757	0.33	-1.0
3,927,335	-		CCNA_03757	0.34	-0.2
3,927,335	-		CCNA_03757	0.34	+0.1
3,927,335	-		CCNA_03757	0.34	-0.1
3,927,360	+		CCNA_03757	0.36	-0.1
3,927,366	+		CCNA_03757	0.36	-2.8
3,927,368	-		CCNA_03757	0.37	-1.2
3,927,371	+		CCNA_03757	0.37	-0.2
3,927,371	+		CCNA_03757	0.37	-2.0
3,927,371	+		CCNA_03757	0.37	-1.8
3,927,371	+		CCNA_03757	0.37	-0.5
3,927,379	-		CCNA_03757	0.38	-1.3
3,927,379	-		CCNA_03757	0.38	-1.1
3,927,452	+		CCNA_03757	0.44	-0.8
3,927,452	+		CCNA_03757	0.44	+0.2
3,927,460	-		CCNA_03757	0.45	-0.2
3,927,487	+		CCNA_03757	0.48	-0.4
3,927,487	+		CCNA_03757	0.48	+0.9
3,927,487	+		CCNA_03757	0.48	+0.6
3,927,495	-		CCNA_03757	0.48	-1.5
3,927,495	-		CCNA_03757	0.48	-1.5
3,927,495	-		CCNA_03757	0.48	-1.8
3,927,502	+		CCNA_03757	0.49	+1.5
3,927,502	+		CCNA_03757	0.49	+1.5
3,927,529	+		CCNA_03757	0.51	-1.0
3,927,530	+				+1.1
3,927,537	-		CCNA_03757	0.52	-0.4
3,927,538	+		CCNA_03757	0.52	+0.3
3,927,538	+		CCNA_03757	0.52	-0.2
3,927,543	+		CCNA_03757	0.53	-1.0
3,927,546	-		CCNA_03757	0.53	-0.6
3,927,561	+		CCNA_03757	0.54	-0.6
3,927,619	-		CCNA_03757	0.60	-0.4
3,927,649	+		CCNA_03757	0.62	-1.3
3,927,677	-		CCNA_03757	0.65	-0.3
3,927,688	+		CCNA_03757	0.66	-2.7
3,927,696	-		CCNA_03757	0.67	-0.6
3,927,709	-		CCNA_03757	0.68	-1.6
3,927,729	+		CCNA_03757	0.70	-1.7
3,927,737	-		CCNA_03757	0.71	-0.1
3,927,737	-		CCNA_03757	0.71	-1.3
3,927,738	-		CCNA_03757	0.71	-0.7
3,927,740	+		CCNA_03757	0.71	-0.7
3,927,740	+		CCNA_03757	0.71	-0.9
3,927,815	+		CCNA_03757	0.78	-1.4
3,927,918	+		CCNA_03757	0.87	-0.1
3,927,924	-		CCNA_03757	0.88	+0.2
3,927,939	+		CCNA_03757	0.89	+2.0
3,928,017	+				+0.3
3,928,055	-				+0.5
3,928,060	-				-2.1
3,928,062	+				-2.1
3,928,109	-				-0.5
3,928,152	+				-0.1
3,928,191	+				-0.4
3,928,191	+				+1.3
3,928,199	-				-1.9
3,928,225	-				+0.4
3,928,235	+				+1.8
3,928,243	-				-1.7
3,928,275	-		CCNA_03758	0.12	+0.1
3,928,275	-		CCNA_03758	0.12	-0.0
3,928,281	+		CCNA_03758	0.13	+1.8
3,928,281	+		CCNA_03758	0.13	+1.9
3,928,281	+		CCNA_03758	0.13	+1.9
3,928,289	-		CCNA_03758	0.13	+0.8
3,928,289	-		CCNA_03758	0.13	-1.6
3,928,289	-		CCNA_03758	0.13	-0.8
3,928,289	-		CCNA_03758	0.13	+1.2
3,928,313	+		CCNA_03758	0.15	+1.4
3,928,323	-		CCNA_03758	0.16	-1.5
3,928,340	+		CCNA_03758	0.18	+1.5
3,928,340	+		CCNA_03758	0.18	+2.0
3,928,348	-		CCNA_03758	0.18	-0.6
3,928,351	+		CCNA_03758	0.19	+1.6
3,928,359	-		CCNA_03758	0.19	-0.8
3,928,361	+		CCNA_03758	0.20	+1.5
3,928,361	+				+2.7
3,928,364	-		CCNA_03758	0.20	-0.7
3,928,364	-		CCNA_03758	0.20	-0.2
3,928,369	-		CCNA_03758	0.20	-0.9
3,928,377	+		CCNA_03758	0.21	+1.9
3,928,385	-		CCNA_03758	0.22	+0.4
3,928,394	+		CCNA_03758	0.22	+2.6
3,928,434	-		CCNA_03758	0.26	+0.0
3,928,445	-		CCNA_03758	0.27	-1.6
3,928,448	+		CCNA_03758	0.27	+1.9
3,928,488	+		CCNA_03758	0.30	+2.3
3,928,496	-		CCNA_03758	0.31	+2.6
3,928,531	+		CCNA_03758	0.34	+2.2
3,928,539	-		CCNA_03758	0.35	-1.1
3,928,602	+		CCNA_03758	0.40	+2.1
3,928,602	+		CCNA_03758	0.40	+2.0
3,928,602	+		CCNA_03758	0.40	+1.7
3,928,644	+		CCNA_03758	0.44	+1.9
3,928,673	+		CCNA_03758	0.46	+1.9
3,928,678	+		CCNA_03758	0.46	+1.9
3,928,691	-		CCNA_03758	0.47	-2.2
3,928,698	+		CCNA_03758	0.48	+1.9
3,928,705	+		CCNA_03758	0.49	+1.8
3,928,734	-		CCNA_03758	0.51	+0.4
3,928,736	+		CCNA_03758	0.51	+1.5
3,928,736	+		CCNA_03758	0.51	+2.2
3,928,765	+		CCNA_03758	0.54	+1.6
3,928,779	+		CCNA_03758	0.55	+1.9
3,928,779	+		CCNA_03758	0.55	+2.3
3,928,786	+		CCNA_03758	0.56	+2.2
3,928,792	+		CCNA_03758	0.56	+2.1
3,928,831	-		CCNA_03758	0.59	-1.1
3,928,859	+		CCNA_03758	0.62	+1.7
3,928,859	+		CCNA_03758	0.62	+1.3
3,928,859	+		CCNA_03758	0.62	+2.1
3,928,859	+		CCNA_03758	0.62	+1.3
3,928,859	+		CCNA_03758	0.62	+1.8
3,928,866	-		CCNA_03758	0.62	-1.0
3,928,867	-		CCNA_03758	0.62	-0.5
3,928,867	-		CCNA_03758	0.62	-1.0
3,928,867	-		CCNA_03758	0.62	+0.1
3,928,867	-		CCNA_03758	0.62	+0.2
3,928,867	-		CCNA_03758	0.62	-0.1
3,928,892	+		CCNA_03758	0.65	+1.6
3,928,902	+		CCNA_03758	0.65	+1.4
3,928,934	-		CCNA_03758	0.68	-2.8
3,928,951	+		CCNA_03758	0.70	+1.4
3,928,963	+		CCNA_03758	0.71	+1.6
3,928,971	-		CCNA_03758	0.71	-0.7
3,928,978	+		CCNA_03758	0.72	+0.9
3,928,986	-		CCNA_03758	0.73	-0.3
3,928,999	-		CCNA_03758	0.74	+0.5
3,929,044	+		CCNA_03758	0.77	+1.5
3,929,044	-		CCNA_03758	0.77	+0.5
3,929,044	-		CCNA_03758	0.77	-0.2
3,929,091	+		CCNA_03758	0.81	+0.5
3,929,099	+		CCNA_03758	0.82	+2.5
3,929,118	-		CCNA_03758	0.84	+0.6
3,929,141	+		CCNA_03758	0.86	+1.5
3,929,169	-		CCNA_03758	0.88	-1.2
3,929,202	+				+1.7
3,929,217	-				-1.4
3,929,219	+				-0.7
3,929,219	+				-1.9
3,929,227	-				-0.7
3,929,227	-				-0.0
3,929,227	-				+1.0
3,929,232	+				+2.7
3,929,245	-				+0.4
3,929,326	-				+0.1
3,929,331	-				+0.0
3,929,342	-				-2.3
3,929,348	-				+0.6
3,929,348	-				+0.6
3,929,367	-				+0.7
3,929,368	-				+1.3
3,929,378	+				-0.5
3,929,379	-				+0.8
3,929,386	-				-0.5
3,929,386	-				+0.1
3,929,397	+		CCNA_03759	0.11	-1.6
3,929,403	+		CCNA_03759	0.11	-2.5
3,929,470	+		CCNA_03759	0.18	+0.8
3,929,470	+		CCNA_03759	0.18	+2.1
3,929,488	-		CCNA_03759	0.20	+0.1
3,929,555	-		CCNA_03759	0.26	-1.0
3,929,579	-		CCNA_03759	0.29	-0.8
3,929,581	+		CCNA_03759	0.29	-1.1
3,929,617	+		CCNA_03759	0.32	-2.9
3,929,620	-		CCNA_03759	0.33	-1.5
3,929,658	-		CCNA_03759	0.36	-0.1
3,929,664	+		CCNA_03759	0.37	-1.6
3,929,672	-		CCNA_03759	0.38	-0.8
3,929,720	+		CCNA_03759	0.42	+0.7
3,929,757	+		CCNA_03759	0.46	-2.3
3,929,776	-		CCNA_03759	0.48	+1.1
3,929,785	+		CCNA_03759	0.49	-1.1
3,929,793	-		CCNA_03759	0.49	-1.3
3,929,795	+		CCNA_03759	0.50	-1.9
3,929,819	-		CCNA_03759	0.52	-1.1
3,929,819	-		CCNA_03759	0.52	-1.1
3,929,910	+		CCNA_03759	0.61	-0.3
3,929,911	-		CCNA_03759	0.61	-1.6
3,929,918	-		CCNA_03759	0.62	-1.0
3,929,918	-		CCNA_03759	0.62	-1.4
3,929,918	-		CCNA_03759	0.62	-0.8
3,929,952	-		CCNA_03759	0.65	-3.4
3,929,968	+		CCNA_03759	0.66	-1.1
3,929,969	+		CCNA_03759	0.66	-1.4
3,929,969	+		CCNA_03759	0.66	-1.4
3,929,969	+		CCNA_03759	0.66	-3.2
3,929,969	+		CCNA_03759	0.66	-1.2
3,929,974	+		CCNA_03759	0.67	-0.3
3,929,977	-		CCNA_03759	0.67	-1.3
3,929,977	-		CCNA_03759	0.67	+0.4
3,929,989	+		CCNA_03759	0.68	+0.2
3,930,001	-		CCNA_03759	0.70	-0.2
3,930,001	-		CCNA_03759	0.70	-2.1
3,930,002	-		CCNA_03759	0.70	+1.0
3,930,019	-		CCNA_03759	0.71	+0.6
3,930,035	+		CCNA_03759	0.73	-0.5
3,930,074	-		CCNA_03759	0.77	-0.3
3,930,098	+		CCNA_03759	0.79	-0.6
3,930,098	+		CCNA_03759	0.79	-2.0
3,930,106	-		CCNA_03759	0.80	-0.5
3,930,106	-		CCNA_03759	0.80	-1.5
3,930,106	-		CCNA_03759	0.80	+0.4
3,930,108	-		CCNA_03759	0.80	-0.4
3,930,163	-		CCNA_03759	0.85	+1.1
3,930,163	-		CCNA_03759	0.85	-1.1
3,930,178	-		CCNA_03759	0.87	-0.1
3,930,192	-		CCNA_03759	0.88	-2.1
3,930,213	+				+0.5
3,930,236	-				-0.5
3,930,251	+				-1.9
3,930,251	+				-2.0
3,930,251	+				-0.7
3,930,251	+				-1.8
3,930,251	+				-0.1
3,930,259	-				-0.8
3,930,259	-				-1.6
3,930,259	-				+0.4
3,930,259	-				-1.4
3,930,265	+				+0.6
3,930,281	+				-0.2
3,930,283	-				-1.5
3,930,298	+				+1.4
3,930,306	-				-0.0
3,930,306	-				+1.0