Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02535

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
2,680,314	+				-0.9
2,680,341	-				-1.5
2,680,404	+				+1.0
2,680,411	+				+0.2
2,680,411	+				+0.5
2,680,411	+				+0.5
2,680,419	+				+2.5
2,680,450	-				-0.4
2,680,473	+				-0.1
2,680,490	-				-1.8
2,680,517	-		CCNA_02532	0.20	+0.8
2,680,536	-		CCNA_02532	0.29	+1.2
2,680,549	+		CCNA_02532	0.35	-1.4
2,680,550	-		CCNA_02532	0.36	-0.0
2,680,557	-		CCNA_02532	0.39	-1.3
2,680,562	-		CCNA_02532	0.42	+0.7
2,680,583	+		CCNA_02532	0.52	+0.6
2,680,583	+		CCNA_02532	0.52	-1.3
2,680,583	+		CCNA_02532	0.52	+0.2
2,680,623	-		CCNA_02532	0.72	-0.1
2,680,626	+		CCNA_02532	0.73	-0.2
2,680,626	+		CCNA_02532	0.73	-1.4
2,680,634	-		CCNA_02532	0.77	-0.1
2,680,634	-		CCNA_02532	0.77	-0.6
2,680,634	-		CCNA_02532	0.77	+0.1
2,680,634	-		CCNA_02532	0.77	+0.3
2,680,664	-				+1.0
2,680,677	+				+1.1
2,680,682	+				+0.1
2,680,699	+				-2.2
2,680,702	-				+0.4
2,680,707	-				-1.3
2,680,715	+				-1.2
2,680,723	-				-0.2
2,680,727	+		CCNA_02533	0.11	-1.5
2,680,750	-		CCNA_02533	0.20	-0.8
2,680,757	+		CCNA_02533	0.22	-1.0
2,680,757	+		CCNA_02533	0.22	+0.6
2,680,765	-		CCNA_02533	0.25	-1.9
2,680,765	-		CCNA_02533	0.25	-1.0
2,680,770	-		CCNA_02533	0.27	+0.3
2,680,778	+		CCNA_02533	0.30	-0.6
2,680,851	+		CCNA_02533	0.57	-2.3
2,680,859	-		CCNA_02533	0.60	-0.3
2,680,883	+				-0.1
2,680,888	+				+0.2
2,680,891	-				+1.8
2,680,906	+				+0.9
2,680,907	+				-1.0
2,680,907	+				-1.5
2,680,915	-				+2.3
2,680,921	-				+1.3
2,680,948	+				-2.5
2,681,077	-		CCNA_02534	0.67	-0.4
2,681,101	-		CCNA_02534	0.81	+2.9
2,681,101	-		CCNA_02534	0.81	+0.8
2,681,137	+				-1.6
2,681,137	+				+1.1
2,681,156	+				-0.5
2,681,178	+				+0.4
2,681,186	-				+0.7
2,681,201	+				-1.7
2,681,239	+				+3.8
2,681,259	+				-0.3
2,683,629	+		CCNA_02535	0.86	-2.0
2,683,738	+		CCNA_02535	0.90	+1.7
2,683,738	+		CCNA_02535	0.90	-0.3
2,683,767	+				-2.0
2,683,813	-				+0.0
2,683,813	-				+0.0
2,683,852	+				+0.4
2,683,852	+				+0.5
2,683,852	+				+0.8
2,683,852	+				+0.9
2,683,852	+				+0.8
2,683,860	-				-1.0
2,683,935	+				+0.9
2,683,938	-				-1.2
2,683,942	+				+1.4
2,683,948	+				+0.8
2,683,948	+				+1.6
2,683,954	+				-0.3
2,684,008	-				-1.6
2,684,012	+				+0.4
2,684,014	-				-1.7
2,684,025	-				-0.1
2,684,030	-				-0.9
2,684,039	-				-1.3
2,684,041	+				+1.5
2,684,044	-				+0.5
2,684,091	-		CCNA_03900	0.11	-1.0
2,684,097	+		CCNA_03900	0.13	+2.9
2,684,098	-		CCNA_03900	0.13	-0.9
2,684,102	+		CCNA_03900	0.14	+1.0
2,684,105	-		CCNA_03900	0.15	+0.9
2,684,110	-		CCNA_03900	0.16	-0.3
2,684,110	-		CCNA_03900	0.16	-0.5
2,684,127	+		CCNA_03900	0.21	+2.0
2,684,132	+		CCNA_03900	0.22	+2.1
2,684,132	+		CCNA_03900	0.22	+0.8
2,684,132	+		CCNA_03900	0.22	+0.9
2,684,132	+		CCNA_03900	0.22	+1.7
2,684,140	-		CCNA_03900	0.24	-2.4
2,684,140	-		CCNA_03900	0.24	-0.4
2,684,176	-		CCNA_03900	0.34	+0.7
2,684,176	-		CCNA_03900	0.34	+1.7
2,684,181	-		CCNA_03900	0.36	+0.9
2,684,197	+		CCNA_03900	0.40	+0.7
2,684,207	-		CCNA_03900	0.43	+1.8
2,684,220	-		CCNA_03900	0.46	+2.7
2,684,269	+		CCNA_03900	0.60	+1.5
2,684,269	+		CCNA_03900	0.60	+1.4
2,684,269	+		CCNA_03900	0.60	+1.7
2,684,277	-		CCNA_03900	0.62	+2.5
2,684,277	-		CCNA_03900	0.62	-1.3
2,684,277	-		CCNA_03900	0.62	-1.2
2,684,277	-		CCNA_03900	0.62	+2.9
2,684,277	-		CCNA_03900	0.62	+0.3
2,684,346	+		CCNA_03900	0.81	-0.6
2,684,405	+				+1.3
2,684,413	-				-0.8
2,684,418	-				+0.4
2,684,465	-				+0.8
2,684,506	+				+2.1
2,684,514	-				+2.3
2,684,521	+				+1.1
2,684,521	+				+0.3
2,684,529	-				-0.7
2,684,564	+				+0.9
2,684,574	+				+0.7
2,684,574	+				+1.6
2,684,583	-				+1.1
2,684,609	+				-0.5
2,684,609	+				-1.3
2,684,617	-				+1.0
2,684,619	+				+0.9
2,684,623	-				+0.2
2,684,634	-				+1.2
2,684,649	-				-0.3
2,684,663	-				+1.5
2,684,663	-				-1.5
2,684,669	-				-0.9
2,684,684	-				-0.9
2,684,716	+				-0.2
2,684,789	-				-0.5
2,684,800	+				+2.7
2,684,806	+				-2.2
2,684,820	+				+0.5
2,684,828	-				+0.9
2,684,828	-				-0.0
2,684,839	-				-0.1
2,684,915	+		CCNA_02537	0.13	+0.6
2,684,918	-		CCNA_02537	0.13	+0.1
2,684,919	-		CCNA_02537	0.13	-0.9
2,684,923	-		CCNA_02537	0.13	-0.7
2,684,923	-		CCNA_02537	0.13	-0.5
2,684,933	-		CCNA_02537	0.14	-0.1
2,684,960	-		CCNA_02537	0.15	-2.3
2,684,967	+		CCNA_02537	0.15	+0.5
2,684,981	-		CCNA_02537	0.16	+1.5
2,685,011	+		CCNA_02537	0.17	+1.0