Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02290

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
2,436,730	-		CCNA_02288	0.42	-0.3
2,436,746	-		CCNA_02288	0.44	-3.6
2,436,805	+		CCNA_02288	0.51	-1.7
2,436,828	+		CCNA_02288	0.53	-0.7
2,436,837	+		CCNA_02288	0.54	-1.7
2,436,838	-		CCNA_02288	0.55	-0.9
2,436,845	-		CCNA_02288	0.55	-1.8
2,436,875	-		CCNA_02288	0.59	-0.6
2,436,876	+		CCNA_02288	0.59	+0.2
2,436,893	+		CCNA_02288	0.61	-1.6
2,436,893	+		CCNA_02288	0.61	-2.3
2,436,901	-		CCNA_02288	0.62	-1.6
2,436,901	-		CCNA_02288	0.62	+1.5
2,436,901	-		CCNA_02288	0.62	-0.2
2,436,902	-		CCNA_02288	0.62	-0.7
2,436,929	-		CCNA_02288	0.65	-2.3
2,436,929	-		CCNA_02288	0.65	-0.0
2,436,934	-		CCNA_02288	0.66	-0.8
2,436,971	+		CCNA_02288	0.70	-1.2
2,436,993	+		CCNA_02288	0.73	+0.0
2,436,996	-		CCNA_02288	0.73	-0.3
2,437,000	-		CCNA_02288	0.74	-0.8
2,437,002	+		CCNA_02288	0.74	+1.4
2,437,006	+		CCNA_02288	0.75	+1.0
2,437,007	+		CCNA_02288	0.75	-1.3
2,437,024	+		CCNA_02288	0.77	+0.8
2,437,066	-		CCNA_02288	0.82	-1.3
2,437,129	+		CCNA_02288	0.89	-0.5
2,437,131	-		CCNA_02288	0.89	-1.1
2,437,144	+				+0.5
2,437,144	+				-0.3
2,437,144	+				-2.1
2,437,152	-				-0.1
2,437,214	+				-3.1
2,437,243	+				+0.4
2,437,249	-				+0.9
2,437,280	-				-0.6
2,437,282	+				-1.5
2,437,282	+				+0.4
2,437,282	+				+0.6
2,437,290	-				+0.5
2,437,290	-				-0.7
2,437,290	-				-0.6
2,437,290	-				-1.5
2,437,303	+				-2.8
2,437,306	-				-0.8
2,437,310	-				+0.0
2,437,367	-				-0.6
2,437,377	-				+0.6
2,437,404	+		CCNA_02289	0.12	+1.4
2,437,464	-		CCNA_02289	0.31	+2.6
2,437,482	-		CCNA_02289	0.37	+2.7
2,437,488	-		CCNA_02289	0.39	+2.7
2,437,488	-		CCNA_02289	0.39	+2.6
2,437,517	-		CCNA_02289	0.48	+2.9
2,437,543	-		CCNA_02289	0.57	+2.9
2,437,595	-		CCNA_02289	0.73	+2.9
2,437,595	-		CCNA_02289	0.73	+2.9
2,437,600	-		CCNA_02289	0.75	+2.7
2,437,605	-		CCNA_02289	0.77	+2.8
2,437,605	-		CCNA_02289	0.77	+2.9
2,437,605	-		CCNA_02289	0.77	+3.1
2,437,613	+		CCNA_02289	0.79	+1.4
2,437,672	-				+0.7
2,437,691	-				+3.1
2,437,751	+		CCNA_02290	0.10	-1.3
2,437,751	+		CCNA_02290	0.10	-0.2
2,437,759	-		CCNA_02290	0.11	+1.6
2,437,830	-		CCNA_02290	0.22	+0.9
2,437,873	-		CCNA_02290	0.29	-0.1
2,437,873	-		CCNA_02290	0.29	+1.1
2,437,873	-		CCNA_02290	0.29	+0.4
2,437,878	+		CCNA_02290	0.30	-0.7
2,437,899	+		CCNA_02290	0.33	-0.3
2,437,901	-		CCNA_02290	0.33	+0.8
2,438,120	-		CCNA_02290	0.67	-0.3
2,438,143	-		CCNA_02290	0.71	-0.2
2,438,188	+		CCNA_02290	0.77	+0.5
2,438,188	+		CCNA_02290	0.77	-0.5
2,438,196	-		CCNA_02290	0.79	-0.1
2,438,201	-		CCNA_02290	0.79	+2.6
2,438,211	+		CCNA_02290	0.81	-1.3
2,438,211	+		CCNA_02290	0.81	-1.6
2,438,226	+		CCNA_02290	0.83	-2.3
2,438,301	+				-1.1
2,438,301	+				-1.3
2,438,301	+				-0.8
2,438,309	-				+1.3
2,438,331	-				-0.2
2,438,394	-				+0.5
2,438,398	+				-0.6
2,438,403	+				-0.2
2,438,408	+				-2.7
2,438,413	-				-1.4
2,438,416	-				-1.1
2,438,423	+				+1.0
2,438,439	+				-1.3
2,438,439	+				+1.2
2,438,447	-				-0.4
2,438,447	-				-0.3
2,438,457	-				+0.2
2,438,479	+		CCNA_02291	0.10	+0.4
2,438,512	+		CCNA_02291	0.13	+0.2
2,438,512	+		CCNA_02291	0.13	-0.2
2,438,520	-		CCNA_02291	0.14	-1.6
2,438,556	-		CCNA_02291	0.17	+0.2
2,438,563	+		CCNA_02291	0.17	-1.6
2,438,573	+		CCNA_02291	0.18	-0.2
2,438,585	+		CCNA_02291	0.19	-1.7
2,438,585	+		CCNA_02291	0.19	-0.8
2,438,590	+		CCNA_02291	0.19	-1.4
2,438,605	+		CCNA_02291	0.21	+0.2
2,438,605	+		CCNA_02291	0.21	+0.1
2,438,608	-		CCNA_02291	0.21	-1.5
2,438,608	-		CCNA_02291	0.21	-1.0
2,438,608	-		CCNA_02291	0.21	-1.3
2,438,609	+		CCNA_02291	0.21	-0.2
2,438,613	-		CCNA_02291	0.21	-0.5
2,438,615	+		CCNA_02291	0.21	-0.6
2,438,615	+		CCNA_02291	0.21	+1.4
2,438,623	-		CCNA_02291	0.22	-0.3
2,438,623	-		CCNA_02291	0.22	+0.1
2,438,712	-		CCNA_02291	0.29	-0.0
2,438,732	-		CCNA_02291	0.31	-1.9
2,438,742	+		CCNA_02291	0.32	-0.7
2,438,764	+		CCNA_02291	0.33	+2.4
2,438,779	+		CCNA_02291	0.35	-1.5
2,438,787	-		CCNA_02291	0.35	-0.7
2,438,787	-		CCNA_02291	0.35	-1.3
2,438,827	+		CCNA_02291	0.38	+1.0
2,438,834	+		CCNA_02291	0.39	-1.2
2,438,842	-		CCNA_02291	0.40	-2.3
2,438,852	+		CCNA_02291	0.40	+0.2
2,438,852	+		CCNA_02291	0.40	+0.0
2,438,853	+		CCNA_02291	0.41	-0.5
2,438,860	-		CCNA_02291	0.41	+0.4
2,438,860	-		CCNA_02291	0.41	+1.9
2,438,860	-		CCNA_02291	0.41	+0.0
2,438,860	-		CCNA_02291	0.41	+0.6
2,438,860	-		CCNA_02291	0.41	-0.2
2,438,868	+		CCNA_02291	0.42	-1.9
2,438,878	-		CCNA_02291	0.43	+1.5
2,438,878	-		CCNA_02291	0.43	+1.9
2,438,894	+		CCNA_02291	0.44	+0.0
2,438,902	-		CCNA_02291	0.44	-1.6
2,438,902	-		CCNA_02291	0.44	+0.2
2,438,917	-		CCNA_02291	0.46	-1.3
2,438,917	-		CCNA_02291	0.46	-0.1
2,438,919	-		CCNA_02291	0.46	-1.2
2,438,959	+		CCNA_02291	0.49	+0.5
2,438,987	-		CCNA_02291	0.51	-0.6
2,439,035	+		CCNA_02291	0.55	+2.0
2,439,075	-		CCNA_02291	0.58	-1.3
2,439,098	-		CCNA_02291	0.60	+0.7
2,439,103	-		CCNA_02291	0.61	+0.4
2,439,217	-		CCNA_02291	0.70	-0.4
2,439,239	+		CCNA_02291	0.72	+0.0
2,439,239	-		CCNA_02291	0.72	-0.2
2,439,263	-		CCNA_02291	0.74	-2.2
2,439,276	+		CCNA_02291	0.75	+0.3
2,439,281	+		CCNA_02291	0.75	-0.6
2,439,294	-		CCNA_02291	0.76	+0.3