Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01842

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
1,973,283	+		CCNA_01841	0.49	+0.7
1,973,289	+		CCNA_01841	0.49	-0.3
1,973,289	+		CCNA_01841	0.49	+2.2
1,973,297	-		CCNA_01841	0.50	-0.7
1,973,319	+		CCNA_01841	0.51	-0.5
1,973,327	-		CCNA_01841	0.52	+0.8
1,973,327	-		CCNA_01841	0.52	+0.4
1,973,328	-		CCNA_01841	0.52	-0.9
1,973,346	-		CCNA_01841	0.53	-1.7
1,973,359	+		CCNA_01841	0.54	-1.8
1,973,359	+		CCNA_01841	0.54	+0.0
1,973,367	-		CCNA_01841	0.54	+0.3
1,973,440	+		CCNA_01841	0.59	-1.0
1,973,442	-		CCNA_01841	0.59	+0.8
1,973,442	-		CCNA_01841	0.59	+1.0
1,973,442	-		CCNA_01841	0.59	-0.8
1,973,484	-		CCNA_01841	0.61	-0.4
1,973,494	-		CCNA_01841	0.62	-0.1
1,973,499	+		CCNA_01841	0.62	-1.2
1,973,499	+		CCNA_01841	0.62	+1.4
1,973,501	+		CCNA_01841	0.62	+0.7
1,973,507	-		CCNA_01841	0.63	+0.9
1,973,509	-		CCNA_01841	0.63	+1.6
1,973,517	-		CCNA_01841	0.63	+0.0
1,973,540	+		CCNA_01841	0.65	+0.6
1,973,553	-		CCNA_01841	0.66	-1.3
1,973,565	+		CCNA_01841	0.66	-0.6
1,973,565	+		CCNA_01841	0.66	-0.2
1,973,574	-		CCNA_01841	0.67	-0.5
1,973,595	+		CCNA_01841	0.68	-0.3
1,973,612	+		CCNA_01841	0.69	-1.2
1,973,651	+		CCNA_01841	0.72	-1.1
1,973,651	+		CCNA_01841	0.72	+0.4
1,973,664	+		CCNA_01841	0.72	+2.2
1,973,744	+		CCNA_01841	0.77	-0.3
1,973,749	+		CCNA_01841	0.78	+0.1
1,973,774	+		CCNA_01841	0.79	-0.3
1,973,789	+		CCNA_01841	0.80	+0.7
1,973,851	+		CCNA_01841	0.84	-1.3
1,973,868	+		CCNA_01841	0.85	+0.0
1,973,935	+		CCNA_01841	0.89	+1.8
1,973,941	+		CCNA_01841	0.90	+1.0
1,973,941	+		CCNA_01841	0.90	+0.5
1,973,943	-		CCNA_01841	0.90	+1.5
1,973,946	+		CCNA_01841	0.90	+1.8
1,973,959	-				+0.6
1,974,009	+				-0.6
1,974,017	-				+1.8
1,974,017	-				+0.4
1,974,017	-				-0.5
1,974,027	+				-0.4
1,974,076	+				+0.4
1,974,084	+				-0.1
1,974,125	+				+1.4
1,974,133	-				-3.4
1,974,216	-		CCNA_01842	0.32	+0.0
1,974,264	+		CCNA_01842	0.53	+0.8
1,974,310	+		CCNA_01842	0.73	+1.0
1,974,310	+		CCNA_01842	0.73	+1.2
1,974,310	+		CCNA_01842	0.73	+2.6
1,974,318	-		CCNA_01842	0.77	+0.9
1,974,328	-		CCNA_01842	0.81	-1.4
1,974,329	+		CCNA_01842	0.82	+0.6
1,974,432	+				-1.0
1,974,473	+				+0.1
1,974,474	+				-0.8
1,974,493	+				-0.4
1,974,519	-				+1.5
1,974,529	-				-0.4
1,974,537	-				+0.5
1,974,537	-				+0.4
1,974,555	-				+0.2
1,974,555	-				-0.4
1,974,555	-				+0.2
1,974,555	-				+0.7
1,974,601	-				+0.5
1,974,601	-				+0.2
1,974,681	-		CCNA_01843	0.15	-1.3
1,974,682	+		CCNA_01843	0.15	+1.5
1,974,760	+		CCNA_01843	0.20	+1.0
1,974,760	+		CCNA_01843	0.20	+1.2
1,974,761	-		CCNA_01843	0.20	+1.5
1,974,768	-		CCNA_01843	0.20	-0.0
1,974,768	-		CCNA_01843	0.20	+1.2
1,974,783	+		CCNA_01843	0.21	+1.4
1,974,791	-		CCNA_01843	0.22	-0.1
1,974,802	-		CCNA_01843	0.22	-0.3
1,974,806	+		CCNA_01843	0.22	-1.3
1,974,811	+		CCNA_01843	0.23	+0.6
1,974,811	+		CCNA_01843	0.23	+0.4
1,974,811	+		CCNA_01843	0.23	-0.5
1,974,811	+		CCNA_01843	0.23	+0.5
1,974,819	-		CCNA_01843	0.23	+0.4
1,974,819	-		CCNA_01843	0.23	-1.2
1,974,819	-		CCNA_01843	0.23	-0.9
1,974,830	-		CCNA_01843	0.24	+0.3
1,974,846	-		CCNA_01843	0.25	+0.9
1,974,897	+		CCNA_01843	0.28	-1.6
1,974,898	+		CCNA_01843	0.28	-1.1
1,974,903	+		CCNA_01843	0.29	+0.5
1,974,903	+		CCNA_01843	0.29	-1.9
1,974,903	+		CCNA_01843	0.29	-1.6
1,974,911	-		CCNA_01843	0.29	+0.1
1,974,911	-		CCNA_01843	0.29	-1.7
1,974,911	-		CCNA_01843	0.29	+0.6
1,974,912	-		CCNA_01843	0.29	-0.6
1,974,916	+		CCNA_01843	0.29	-1.1
1,974,924	-		CCNA_01843	0.30	-0.5
1,974,924	-		CCNA_01843	0.30	+2.7
1,974,926	+		CCNA_01843	0.30	-2.5
1,974,961	-		CCNA_01843	0.32	-0.0
1,974,989	-		CCNA_01843	0.34	-0.4
1,974,994	+		CCNA_01843	0.34	-0.0
1,975,016	+		CCNA_01843	0.36	-0.1
1,975,016	+		CCNA_01843	0.36	+0.3
1,975,024	-		CCNA_01843	0.36	+2.5
1,975,024	-		CCNA_01843	0.36	+1.0
1,975,064	+		CCNA_01843	0.39	-0.2
1,975,070	-		CCNA_01843	0.39	+1.8
1,975,077	-		CCNA_01843	0.40	-0.3
1,975,086	+		CCNA_01843	0.40	+0.3
1,975,094	-		CCNA_01843	0.41	-0.4
1,975,094	-				+2.8
1,975,104	+		CCNA_01843	0.41	+1.5
1,975,139	+		CCNA_01843	0.44	+3.8
1,975,142	+		CCNA_01843	0.44	+0.9
1,975,150	+		CCNA_01843	0.44	-0.0
1,975,150	-		CCNA_01843	0.44	+0.8
1,975,173	+		CCNA_01843	0.46	-0.8
1,975,241	-		CCNA_01843	0.50	-1.2
1,975,248	-		CCNA_01843	0.51	-1.7
1,975,258	+		CCNA_01843	0.51	-1.1
1,975,258	+		CCNA_01843	0.51	-0.3
1,975,287	-		CCNA_01843	0.53	-0.7
1,975,311	-		CCNA_01843	0.54	-1.0
1,975,323	+		CCNA_01843	0.55	-0.6
1,975,353	-		CCNA_01843	0.57	+0.2
1,975,357	+		CCNA_01843	0.57	+0.1
1,975,364	-		CCNA_01843	0.58	-2.0