Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28885

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
6,282,196	+		AO353_28880	0.40	+0.0
6,282,196	+		AO353_28880	0.40	+0.6
6,282,208	-		AO353_28880	0.41	-0.2
6,282,208	-		AO353_28880	0.41	-0.2
6,282,208	-		AO353_28880	0.41	-1.0
6,282,230	+				+0.6
6,282,230	+		AO353_28880	0.43	+1.0
6,282,230	+		AO353_28880	0.43	-0.7
6,282,231	-		AO353_28880	0.43	+0.0
6,282,346	+		AO353_28880	0.54	-0.3
6,282,346	+		AO353_28880	0.54	-0.6
6,282,346	+		AO353_28880	0.54	+1.6
6,282,439	+		AO353_28880	0.63	-0.6
6,282,440	-		AO353_28880	0.63	-1.1
6,282,509	+		AO353_28880	0.70	-0.6
6,282,509	+		AO353_28880	0.70	-1.0
6,282,509	+		AO353_28880	0.70	-1.2
6,282,509	+		AO353_28880	0.70	-0.2
6,282,510	-		AO353_28880	0.70	-2.1
6,282,510	-		AO353_28880	0.70	+0.2
6,282,510	-		AO353_28880	0.70	-0.7
6,282,510	-		AO353_28880	0.70	+0.9
6,282,510	-		AO353_28880	0.70	-0.7
6,282,510	-		AO353_28880	0.70	+0.5
6,282,684	+		AO353_28880	0.86	+0.0
6,282,684	+		AO353_28880	0.86	-0.9
6,282,685	-		AO353_28880	0.86	-1.6
6,282,685	-		AO353_28880	0.86	+0.5
6,282,685	-		AO353_28880	0.86	+0.9
6,282,685	-		AO353_28880	0.86	-1.2
6,282,685	-		AO353_28880	0.86	+0.5
6,282,685	-		AO353_28880	0.86	-0.6
6,282,692	+		AO353_28880	0.87	+0.3
6,282,799	+				-0.3
6,282,799	+				-0.2
6,282,800	-				+0.4
6,282,849	+				+0.9
6,282,850	-				-0.7
6,282,906	-				-0.6
6,282,907	+				-0.8
6,282,907	+				+0.5
6,282,937	+				-0.9
6,282,937	+				-1.6
6,282,938	-				+0.6
6,282,938	-				-2.2
6,282,938	-				-1.1
6,282,949	-				+1.2
6,282,975	+				+0.8
6,282,975	+				-0.5
6,282,975	+				-0.4
6,282,976	-				+0.6
6,282,976	-				-1.1
6,282,976	-				-0.8
6,283,062	+				+0.5
6,283,095	-				-0.1
6,283,095	-				+0.4
6,283,095	-				-1.4
6,283,096	+				+0.6
6,283,097	-				-1.0
6,283,097	-				+2.2
6,283,097	-				+1.6
6,283,097	-				+0.1
6,283,097	-				-1.8
6,283,097	-				-0.1
6,283,097	-				-1.2
6,283,097	-				-0.6
6,283,119	+				+0.5
6,283,120	-				+0.8
6,283,134	+				-0.6
6,283,134	+				+1.6
6,283,177	-				-1.6
6,283,208	+		AO353_28885	0.13	-2.6
6,283,208	+		AO353_28885	0.13	-1.2
6,283,208	+		AO353_28885	0.13	-1.2
6,283,209	-		AO353_28885	0.13	-0.3
6,283,209	-		AO353_28885	0.13	-1.0
6,283,209	-		AO353_28885	0.13	-0.2
6,283,280	+		AO353_28885	0.30	-2.3
6,283,280	+		AO353_28885	0.30	+1.1
6,283,280	+		AO353_28885	0.30	+0.2
6,283,280	+		AO353_28885	0.30	-1.7
6,283,281	-		AO353_28885	0.30	+0.2
6,283,281	-		AO353_28885	0.30	-0.7
6,283,281	-		AO353_28885	0.30	-0.7
6,283,281	-		AO353_28885	0.30	-0.7
6,283,319	+		AO353_28885	0.39	-1.2
6,283,319	+		AO353_28885	0.39	+0.8
6,283,319	+		AO353_28885	0.39	-2.7
6,283,320	-		AO353_28885	0.40	-1.8
6,283,343	-		AO353_28885	0.45	-0.6
6,283,360	+		AO353_28885	0.49	+0.7
6,283,360	+		AO353_28885	0.49	+1.3
6,283,360	+		AO353_28885	0.49	+1.4
6,283,360	+		AO353_28885	0.49	+0.6
6,283,360	+		AO353_28885	0.49	+1.2
6,283,361	-		AO353_28885	0.50	-1.1
6,283,361	-		AO353_28885	0.50	-1.3
6,283,361	-		AO353_28885	0.50	-0.0
6,283,370	+		AO353_28885	0.52	-0.5
6,283,370	+		AO353_28885	0.52	-0.4
6,283,371	-		AO353_28885	0.52	+1.4
6,283,371	-		AO353_28885	0.52	+0.3
6,283,371	-		AO353_28885	0.52	-0.3
6,283,473	+		AO353_28885	0.77	+0.2
6,283,473	+		AO353_28885	0.77	-0.2
6,283,473	+		AO353_28885	0.77	-0.3
6,283,473	+		AO353_28885	0.77	+0.0
6,283,474	-		AO353_28885	0.77	-1.0
6,283,474	-		AO353_28885	0.77	-0.4
6,283,474	-		AO353_28885	0.77	-1.0
6,283,518	+		AO353_28885	0.87	-1.2
6,283,519	-		AO353_28885	0.88	+0.4
6,283,519	-		AO353_28885	0.88	-1.3
6,283,567	+				+0.7
6,283,581	-				+0.0
6,283,589	+				+0.0
6,283,589	+				-0.3
6,283,590	-				+0.4
6,283,590	-				+1.4
6,283,590	-				-0.4
6,283,590	-				+0.6
6,283,613	-				-0.9
6,283,613	-				+0.0
6,283,656	+				-0.9
6,283,656	+				-2.3
6,283,656	+				-1.1
6,283,656	+				+0.2
6,283,657	-				-0.8
6,283,657	-				+0.9
6,283,674	+				-0.8
6,283,674	+				-0.4
6,283,674	+				+0.4
6,283,674	+				+0.9
6,283,674	+				-0.4
6,283,674	+				-0.5
6,283,674	+				-1.2
6,283,675	-				+1.1
6,283,675	-				-2.5
6,283,675	-				-0.2
6,283,675	-				+0.0
6,283,675	-				-0.6
6,283,717	+				+1.3
6,283,718	-				-1.0
6,283,737	+				-0.8
6,283,737	+				-0.4
6,283,737	+				+0.7
6,283,737	+				+0.5
6,283,737	+				-0.9
6,283,738	-				+1.5
6,283,738	-				-1.5
6,283,768	+				-1.6
6,283,768	+				-0.5
6,283,768	+				-0.3
6,283,768	+				-0.2
6,283,769	-				+0.0
6,283,769	-				-1.7
6,283,772	+				+0.0
6,283,772	+				-0.7
6,283,772	+				+3.0
6,283,772	+				+0.4
6,283,772	+				-1.2
6,283,772	+				+0.8
6,283,772	+				+3.2
6,283,772	+				+0.0
6,283,772	+				+0.6
6,283,773	-				-1.7
6,283,773	-				-0.4
6,283,773	-				+1.1
6,283,773	-				-0.1
6,283,773	-				-0.3
6,283,773	-				+1.6
6,283,773	-				+2.2
6,283,773	-				-0.0
6,283,796	+				+0.6
6,283,796	+				+0.7
6,283,797	-				-1.6
6,283,797	-				+0.2
6,284,084	+		AO353_28890	0.53	+0.0
6,284,084	+		AO353_28890	0.53	-2.6
6,284,084	+		AO353_28890	0.53	+1.6
6,284,084	+		AO353_28890	0.53	+0.7
6,284,084	+		AO353_28890	0.53	-2.0
6,284,084	+		AO353_28890	0.53	-0.2
6,284,084	+		AO353_28890	0.53	+0.6
6,284,155	-		AO353_28890	0.67	-0.7
6,284,155	-		AO353_28890	0.67	-1.0
6,284,339	+				-0.4
6,284,339	+				+0.6
6,284,340	-				+0.8
6,284,340	-				+0.8
6,284,340	-				+0.4
6,284,357	-				-0.7
6,284,409	+				+0.4
6,284,409	+				-0.5
6,284,409	+				-2.2
6,284,409	+				-1.5
6,284,410	-				+0.5
6,284,410	-				-0.2
6,284,410	-				+1.4
6,284,442	-				-1.8
6,284,442	-				-1.7
6,284,442	-				+2.0
6,284,454	+				-0.4
6,284,454	+				+0.5
6,284,460	+				-0.2
6,284,460	+				+0.2
6,284,461	-				-0.2
6,284,461	-				+2.0
6,284,461	-				-1.4
6,284,461	-				+0.1
6,284,461	-				+0.9
6,284,461	-				-1.1
6,284,462	+				+0.1
6,284,462	+				-0.3
6,284,462	+				+0.6
6,284,462	+				-1.7
6,284,463	-				-1.4
6,284,463	-				+1.1
6,284,463	-				-0.8
6,284,463	-				+0.2
6,284,463	-				+1.2
6,284,463	-				-0.1
6,284,475	-				-0.4
6,284,507	+				+0.6
6,284,507	+				+1.2