Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21225

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
4,640,474	+				+0.1
4,640,474	+				-1.0
4,640,475	-				+1.0
4,640,475	-				-1.9
4,640,475	-				+0.5
4,640,475	-				-0.3
4,640,475	-				-2.1
4,640,503	-				-0.2
4,640,510	+				-0.4
4,640,510	+				+0.0
4,640,510	+				+2.6
4,640,515	-				-0.4
4,640,570	+				+0.3
4,640,570	+				-0.9
4,640,570	+				+0.1
4,640,570	+				+1.1
4,640,570	+				-0.2
4,640,570	+				-0.9
4,640,571	-				+0.5
4,640,571	-				+0.7
4,640,693	+		AO353_21220	0.16	+0.4
4,640,693	+		AO353_21220	0.16	+0.3
4,640,693	+		AO353_21220	0.16	-0.6
4,640,694	-		AO353_21220	0.16	-0.2
4,640,694	-		AO353_21220	0.16	+0.0
4,640,746	+		AO353_21220	0.23	+0.7
4,640,747	-		AO353_21220	0.23	-0.3
4,640,749	+		AO353_21220	0.24	-0.7
4,640,749	+		AO353_21220	0.24	-2.3
4,640,749	+		AO353_21220	0.24	-0.3
4,640,749	+		AO353_21220	0.24	+1.0
4,640,749	+		AO353_21220	0.24	+0.9
4,640,749	+		AO353_21220	0.24	-0.2
4,640,750	-		AO353_21220	0.24	+0.0
4,640,750	-		AO353_21220	0.24	+1.6
4,640,750	-		AO353_21220	0.24	+0.7
4,640,750	-		AO353_21220	0.24	+0.5
4,640,752	-		AO353_21220	0.24	+0.4
4,640,777	+		AO353_21220	0.27	-1.4
4,640,777	+		AO353_21220	0.27	+1.0
4,640,777	+		AO353_21220	0.27	-2.4
4,640,778	-		AO353_21220	0.27	-1.0
4,640,778	-		AO353_21220	0.27	+1.3
4,640,837	+		AO353_21220	0.35	+0.1
4,640,841	+		AO353_21220	0.36	-2.5
4,640,842	-		AO353_21220	0.36	-0.5
4,640,842	-		AO353_21220	0.36	+0.8
4,640,842	-		AO353_21220	0.36	-1.0
4,640,870	+		AO353_21220	0.40	-0.3
4,640,958	-		AO353_21220	0.51	-0.7
4,640,972	+		AO353_21220	0.53	+0.9
4,640,972	+		AO353_21220	0.53	-0.4
4,640,972	+		AO353_21220	0.53	-0.4
4,640,972	+		AO353_21220	0.53	+1.3
4,640,973	-		AO353_21220	0.53	+1.1
4,640,973	-		AO353_21220	0.53	+0.7
4,640,973	-		AO353_21220	0.53	-1.2
4,640,973	-				-0.4
4,640,973	-		AO353_21220	0.53	-0.1
4,640,973	-		AO353_21220	0.53	-0.7
4,640,973	-		AO353_21220	0.53	-0.5
4,641,010	+		AO353_21220	0.58	-0.5
4,641,010	+		AO353_21220	0.58	-2.0
4,641,010	+		AO353_21220	0.58	-1.9
4,641,010	+		AO353_21220	0.58	-0.7
4,641,010	+		AO353_21220	0.58	+1.2
4,641,010	+		AO353_21220	0.58	+0.1
4,641,011	-		AO353_21220	0.58	-1.3
4,641,011	-		AO353_21220	0.58	-1.4
4,641,011	-		AO353_21220	0.58	+0.6
4,641,011	-		AO353_21220	0.58	-0.2
4,641,011	-		AO353_21220	0.58	+0.4
4,641,011	-		AO353_21220	0.58	+1.4
4,641,011	-		AO353_21220	0.58	-0.7
4,641,011	-		AO353_21220	0.58	-1.7
4,641,011	-		AO353_21220	0.58	+0.6
4,641,011	-		AO353_21220	0.58	+0.3
4,641,011	-		AO353_21220	0.58	-0.1
4,641,011	-		AO353_21220	0.58	-0.1
4,641,011	-		AO353_21220	0.58	+0.5
4,641,011	-		AO353_21220	0.58	+0.8
4,641,011	-		AO353_21220	0.58	+1.2
4,641,011	-		AO353_21220	0.58	+0.0
4,641,011	-		AO353_21220	0.58	+0.6
4,641,122	+		AO353_21220	0.73	+1.6
4,641,123	-		AO353_21220	0.73	+2.6
4,641,239	+		AO353_21220	0.89	-1.6
4,641,250	+				-1.1
4,641,250	+				+0.1
4,641,251	-				-0.8
4,641,251	-				-0.2
4,641,251	-				-2.5
4,641,251	-				+0.3
4,641,306	+				-2.5
4,641,306	+				-0.7
4,641,306	+				+2.2
4,641,307	-				+0.9
4,641,307	-				+0.2
4,641,307	-				-0.4
4,641,307	-				-0.1
4,641,307	-				-0.8
4,641,307	-				+0.0
4,641,307	-				+0.0
4,641,312	-				-0.4
4,641,327	+				-0.3
4,641,328	-				-0.8
4,641,328	-				-0.6
4,641,328	-				-1.0
4,641,364	+				+0.9
4,641,364	+				-0.6
4,641,364	+				+0.6
4,641,364	+				+0.6
4,641,365	-				-1.6
4,641,442	+				-0.7
4,641,442	+				+0.7
4,641,442	+				+1.1
4,641,442	+				+0.0
4,641,442	+				-1.3
4,641,442	+				+0.2
4,641,442	+				-1.7
4,641,443	-				-1.0
4,641,443	-				-1.4
4,641,454	-				+0.3
4,641,454	-				-0.5
4,641,454	-				-0.1
4,641,454	-				+0.6
4,641,454	-				+0.4
4,641,457	+				-0.4
4,641,457	+				-0.6
4,641,457	+				+2.2
4,641,457	+				+0.7
4,641,458	-				-0.7
4,641,458	-				+0.6
4,641,458	-				+1.0
4,641,485	+				+0.8
4,641,510	+		AO353_21225	0.11	+0.0
4,641,539	+		AO353_21225	0.17	+0.2
4,641,540	-		AO353_21225	0.17	-1.7
4,641,554	+		AO353_21225	0.20	-2.0
4,641,554	+		AO353_21225	0.20	-1.2
4,641,554	+		AO353_21225	0.20	-0.7
4,641,554	+		AO353_21225	0.20	+3.0
4,641,555	-		AO353_21225	0.20	+0.2
4,641,555	-		AO353_21225	0.20	+1.4
4,641,556	+		AO353_21225	0.20	+0.5
4,641,556	+		AO353_21225	0.20	-0.6
4,641,557	-		AO353_21225	0.20	-0.7
4,641,557	-		AO353_21225	0.20	-2.1
4,641,557	-		AO353_21225	0.20	-0.4
4,641,557	-		AO353_21225	0.20	+0.4
4,641,582	+		AO353_21225	0.25	-0.2
4,641,582	+		AO353_21225	0.25	+0.8
4,641,582	+		AO353_21225	0.25	+0.3
4,641,582	+		AO353_21225	0.25	+0.0
4,641,582	+		AO353_21225	0.25	+0.0
4,641,582	+		AO353_21225	0.25	-0.4
4,641,582	+		AO353_21225	0.25	-0.4
4,641,582	+		AO353_21225	0.25	-0.4
4,641,582	+		AO353_21225	0.25	+0.0
4,641,582	+		AO353_21225	0.25	-2.2
4,641,583	-		AO353_21225	0.25	-0.2
4,641,583	-		AO353_21225	0.25	-1.9
4,641,583	-		AO353_21225	0.25	+0.8
4,641,583	-		AO353_21225	0.25	-1.2
4,641,583	-		AO353_21225	0.25	-1.0
4,641,583	-		AO353_21225	0.25	-0.7
4,641,583	-		AO353_21225	0.25	+0.4
4,641,583	-				+2.4
4,641,583	-		AO353_21225	0.25	-2.1
4,641,583	-		AO353_21225	0.25	+0.4
4,641,583	-		AO353_21225	0.25	+2.1
4,641,583	-		AO353_21225	0.25	+0.4
4,641,583	-		AO353_21225	0.25	+0.2
4,641,584	+		AO353_21225	0.26	-0.9
4,641,585	-		AO353_21225	0.26	-0.6
4,641,657	-		AO353_21225	0.40	+0.0
4,641,828	+		AO353_21225	0.74	-0.6
4,641,858	-		AO353_21225	0.80	-1.6
4,641,866	-		AO353_21225	0.82	+0.9
4,641,866	-		AO353_21225	0.82	+1.6
4,641,866	-		AO353_21225	0.82	-1.7
4,641,866	-		AO353_21225	0.82	-1.8
4,641,896	+		AO353_21225	0.88	-1.4
4,641,897	-		AO353_21225	0.88	-1.3
4,641,915	+				-1.9
4,641,915	+				-0.4
4,641,915	+				+1.6
4,641,916	-				+0.0
4,641,918	+				+0.5
4,641,918	+				-0.9
4,641,935	+				-0.4
4,641,935	+				-1.0
4,641,938	+				+0.0
4,641,957	-				+1.3
4,641,957	-				+0.4
4,641,982	+				-0.6
4,641,982	+				-2.3
4,641,982	+				-0.1
4,641,983	-				-1.4
4,642,028	+				-0.1
4,642,028	+				+0.3
4,642,028	+				+0.9
4,642,029	-				-1.2
4,642,029	-				-1.0
4,642,029	-				-1.5
4,642,029	-				+0.2
4,642,031	+				+1.8
4,642,032	-				-0.9
4,642,075	+				-0.5
4,642,150	-				+0.9
4,642,162	+				-1.1
4,642,163	-				-0.7
4,642,163	-				+0.0
4,642,339	+				+0.4
4,642,340	-				-0.9
4,642,374	+				-0.6
4,642,374	+				-0.2
4,642,584	+				+0.4
4,642,584	+				-0.4
4,642,584	+				+0.3
4,642,584	+				+0.6
4,642,584	+				+0.8
4,642,584	+				-0.4
4,642,584	+				-0.5
4,642,584	+				+1.1
4,642,585	-				-0.7
4,642,585	-				-0.4
4,642,585	-				-0.6
4,642,585	-				-0.3
4,642,585	-				-1.2
4,642,590	+				-0.1
4,642,601	+				-0.4
4,642,601	+				-1.0
4,642,601	+				+2.1
4,642,602	-				-1.4
4,642,633	+				-1.9
4,642,633	+				-1.0
4,642,633	+				+0.9
4,642,634	-				+1.2
4,642,634	-				+1.3
4,642,634	-				-2.1
4,642,654	+				-0.7
4,642,654	+				+0.7
4,642,709	-				-2.0
4,642,709	-				-0.2
4,642,789	+				-0.4
4,642,802	+				-1.2
4,642,802	+				-0.1
4,642,802	+				+0.1
4,642,802	+				+1.1
4,642,803	-				+0.3
4,642,803	-				-1.4
4,642,826	-				-1.2