Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19870

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
4,365,639	+		AO353_19865	0.11	-0.8
4,365,700	+		AO353_19865	0.17	+0.2
4,365,700	+		AO353_19865	0.17	-0.9
4,365,700	+		AO353_19865	0.17	-0.3
4,365,701	-		AO353_19865	0.17	-1.7
4,365,701	-		AO353_19865	0.17	-0.6
4,365,769	+		AO353_19865	0.24	-0.4
4,365,770	-		AO353_19865	0.24	+0.1
4,365,770	-		AO353_19865	0.24	-0.3
4,365,912	-		AO353_19865	0.39	+0.5
4,365,912	-		AO353_19865	0.39	-0.3
4,365,950	+		AO353_19865	0.42	-1.7
4,365,950	+		AO353_19865	0.42	-0.1
4,365,950	+		AO353_19865	0.42	-0.4
4,365,950	+		AO353_19865	0.42	-0.0
4,365,950	+		AO353_19865	0.42	+0.1
4,365,950	+		AO353_19865	0.42	+0.0
4,365,951	-		AO353_19865	0.43	-0.3
4,365,951	-		AO353_19865	0.43	-2.0
4,365,951	-		AO353_19865	0.43	+1.1
4,365,952	+		AO353_19865	0.43	-0.9
4,365,952	+		AO353_19865	0.43	-1.6
4,365,952	+		AO353_19865	0.43	-0.6
4,365,952	+		AO353_19865	0.43	+2.6
4,365,952	+		AO353_19865	0.43	-0.3
4,365,952	+		AO353_19865	0.43	+0.1
4,365,952	+		AO353_19865	0.43	-0.1
4,365,952	+		AO353_19865	0.43	-1.1
4,365,953	-		AO353_19865	0.43	-0.8
4,365,953	-		AO353_19865	0.43	-0.1
4,365,953	-		AO353_19865	0.43	-0.6
4,365,953	-		AO353_19865	0.43	+0.6
4,365,953	-		AO353_19865	0.43	-0.6
4,365,953	-		AO353_19865	0.43	+1.3
4,366,014	-		AO353_19865	0.49	-0.5
4,366,078	+		AO353_19865	0.55	-0.1
4,366,079	-		AO353_19865	0.56	+0.5
4,366,079	-		AO353_19865	0.56	-0.6
4,366,079	-		AO353_19865	0.56	+1.2
4,366,151	+		AO353_19865	0.63	+0.1
4,366,151	+		AO353_19865	0.63	+0.3
4,366,151	+		AO353_19865	0.63	+3.1
4,366,152	-		AO353_19865	0.63	-1.4
4,366,176	+		AO353_19865	0.65	+0.8
4,366,177	-		AO353_19865	0.66	-1.4
4,366,177	-		AO353_19865	0.66	-0.9
4,366,429	+				-1.7
4,366,430	-				-0.0
4,366,498	+				-0.3
4,366,498	+				+0.2
4,366,498	+				+0.2
4,366,499	-				+1.1
4,366,499	-				-0.2
4,366,499	-				-1.3
4,366,620	+				-0.6
4,366,620	+				-1.1
4,366,700	+		AO353_19870	0.20	+0.4
4,366,700	+		AO353_19870	0.20	+1.4
4,366,701	-		AO353_19870	0.20	-1.7
4,366,701	-		AO353_19870	0.20	-0.7
4,366,732	+		AO353_19870	0.24	-2.7
4,366,733	-		AO353_19870	0.24	-2.2
4,366,733	-		AO353_19870	0.24	-1.1
4,366,764	+		AO353_19870	0.29	-0.0
4,366,867	+		AO353_19870	0.42	+0.7
4,366,896	+		AO353_19870	0.46	-1.0
4,366,896	+		AO353_19870	0.46	-1.1
4,366,896	+		AO353_19870	0.46	+1.4
4,366,897	-		AO353_19870	0.46	-0.8
4,366,897	-		AO353_19870	0.46	+0.5
4,366,974	+		AO353_19870	0.56	+0.3
4,366,974	+		AO353_19870	0.56	+1.5
4,366,974	+		AO353_19870	0.56	-0.7
4,366,975	-		AO353_19870	0.57	+1.1
4,366,975	-		AO353_19870	0.57	+0.9
4,367,027	-		AO353_19870	0.63	-1.4
4,367,132	+		AO353_19870	0.77	-0.9
4,367,132	+		AO353_19870	0.77	-0.2
4,367,152	-		AO353_19870	0.80	-1.0
4,367,158	+		AO353_19870	0.81	-0.3
4,367,159	-		AO353_19870	0.81	-0.7
4,367,191	+		AO353_19870	0.85	-0.3
4,367,191	+		AO353_19870	0.85	+0.6
4,367,191	+		AO353_19870	0.85	+0.1
4,367,192	-		AO353_19870	0.85	+1.2
4,367,264	+				-1.0
4,367,291	+				-0.4
4,367,292	-				-0.1
4,367,292	-				-0.6
4,367,322	+				-1.4
4,367,322	+				-0.6
4,367,322	+				+1.1
4,367,322	+				-1.1
4,367,323	-				-0.4
4,367,323	-				+0.4
4,367,323	-				+0.5
4,367,331	+				-0.9
4,367,331	+				+0.4
4,367,332	-				+0.6
4,367,358	+				-1.4
4,367,358	+				-0.3
4,367,359	-				+1.4
4,367,365	+				-1.2
4,367,382	+				-0.9
4,367,382	+				-1.1
4,367,382	+				+0.2
4,367,383	-				-1.6
4,367,383	-				-0.4
4,367,478	+				-0.1
4,367,478	+				-1.1
4,367,479	-				-0.2
4,367,479	-				+1.7
4,367,479	-				-0.6
4,367,633	+				-0.2
4,367,634	-				-2.7
4,367,651	+				-0.5
4,367,652	-				+0.7
4,367,672	+				-0.1
4,367,672	+				+0.1
4,367,673	-				-1.6
4,367,673	-				+1.0
4,367,673	-				-0.1
4,367,721	+				+0.6
4,367,721	+				+0.3
4,367,721	+				-1.0
4,367,722	-				+0.6
4,367,722	-				+2.1
4,367,722	-				+0.3
4,367,722	-				+0.6
4,367,734	-				+1.5
4,367,774	+				-0.6
4,367,774	+				+0.0
4,367,774	+				+1.1
4,367,774	+				-0.3
4,367,775	-				-1.4
4,367,775	-				-0.4
4,367,775	-				-0.7
4,367,775	-				-1.1
4,367,775	-				+0.7
4,367,775	-				+0.4
4,367,775	-				-0.5
4,367,870	+		AO353_19875	0.12	-0.7
4,367,870	+		AO353_19875	0.12	-1.8
4,367,870	+		AO353_19875	0.12	-1.9
4,367,870	+		AO353_19875	0.12	-0.6
4,367,871	-		AO353_19875	0.12	+0.9
4,367,871	-		AO353_19875	0.12	-0.3
4,367,871	-		AO353_19875	0.12	+0.7
4,367,885	+		AO353_19875	0.12	-1.3
4,367,885	+		AO353_19875	0.12	-0.5
4,367,885	+		AO353_19875	0.12	-0.6
4,367,885	+		AO353_19875	0.12	-0.6
4,367,885	+		AO353_19875	0.12	-0.4
4,367,885	+		AO353_19875	0.12	-1.5
4,367,886	-		AO353_19875	0.13	+0.4
4,367,886	-		AO353_19875	0.13	-2.0
4,367,886	-		AO353_19875	0.13	-1.0
4,367,886	-		AO353_19875	0.13	+0.7
4,367,886	-		AO353_19875	0.13	-0.6
4,367,886	-		AO353_19875	0.13	-0.1
4,367,886	-		AO353_19875	0.13	+0.7
4,368,027	-		AO353_19875	0.18	-1.3
4,368,200	+		AO353_19875	0.26	-0.3
4,368,200	+		AO353_19875	0.26	+0.9
4,368,201	-		AO353_19875	0.26	+0.7
4,368,201	-		AO353_19875	0.26	+1.0
4,368,263	+		AO353_19875	0.28	+0.9
4,368,263	+		AO353_19875	0.28	-2.8
4,368,263	+		AO353_19875	0.28	-0.4
4,368,263	+		AO353_19875	0.28	-0.6
4,368,263	+		AO353_19875	0.28	-1.1
4,368,263	+		AO353_19875	0.28	-1.9
4,368,263	+		AO353_19875	0.28	-1.3
4,368,263	+		AO353_19875	0.28	-2.4
4,368,263	+		AO353_19875	0.28	+0.1
4,368,263	+		AO353_19875	0.28	-0.1
4,368,263	+		AO353_19875	0.28	-0.6
4,368,263	+		AO353_19875	0.28	-0.2
4,368,263	+		AO353_19875	0.28	+0.1
4,368,263	+		AO353_19875	0.28	+0.1
4,368,264	-		AO353_19875	0.28	-0.7
4,368,264	-		AO353_19875	0.28	+0.5
4,368,264	-		AO353_19875	0.28	+1.0
4,368,264	-		AO353_19875	0.28	-1.1
4,368,264	-		AO353_19875	0.28	+0.0
4,368,264	-		AO353_19875	0.28	+1.1
4,368,264	-		AO353_19875	0.28	+0.4
4,368,264	-		AO353_19875	0.28	-2.1
4,368,264	-		AO353_19875	0.28	+1.6
4,368,264	-		AO353_19875	0.28	+4.1
4,368,276	-		AO353_19875	0.29	+0.9