Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18240

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
4,022,234	+		AO353_18230	0.88	+1.2
4,022,234	+		AO353_18230	0.88	+0.5
4,022,234	+		AO353_18230	0.88	+0.4
4,022,234	+		AO353_18230	0.88	+0.3
4,022,234	+		AO353_18230	0.88	+0.2
4,022,234	+		AO353_18230	0.88	-1.1
4,022,234	+		AO353_18230	0.88	-0.3
4,022,234	+		AO353_18230	0.88	+0.0
4,022,234	+		AO353_18230	0.88	+1.8
4,022,234	+		AO353_18230	0.88	+1.0
4,022,234	+		AO353_18230	0.88	-2.9
4,022,234	+		AO353_18230	0.88	+1.8
4,022,234	+		AO353_18230	0.88	+0.6
4,022,234	+		AO353_18230	0.88	-1.2
4,022,235	-		AO353_18230	0.88	-1.8
4,022,235	-		AO353_18230	0.88	-0.4
4,022,235	-		AO353_18230	0.88	+1.6
4,022,235	-		AO353_18230	0.88	+1.6
4,022,235	-		AO353_18230	0.88	+0.8
4,022,235	-		AO353_18230	0.88	-2.8
4,022,235	-		AO353_18230	0.88	-0.4
4,022,235	-		AO353_18230	0.88	-0.5
4,022,235	-		AO353_18230	0.88	+1.6
4,022,235	-		AO353_18230	0.88	+0.3
4,022,337	-				-1.9
4,022,501	+		AO353_18235	0.12	-0.5
4,022,501	+		AO353_18235	0.12	+0.1
4,022,502	-		AO353_18235	0.12	-1.0
4,022,502	-		AO353_18235	0.12	-0.3
4,022,502	-		AO353_18235	0.12	+0.8
4,022,502	-		AO353_18235	0.12	+0.9
4,022,528	+		AO353_18235	0.17	-0.3
4,022,528	+		AO353_18235	0.17	-0.7
4,022,529	-		AO353_18235	0.17	+0.6
4,022,529	-		AO353_18235	0.17	+0.2
4,022,529	-		AO353_18235	0.17	-0.1
4,022,529	-		AO353_18235	0.17	+2.1
4,022,673	-		AO353_18235	0.41	-0.2
4,022,848	+		AO353_18235	0.69	-1.8
4,022,848	+		AO353_18235	0.69	-0.8
4,022,848	+		AO353_18235	0.69	+0.2
4,022,848	+		AO353_18235	0.69	+0.6
4,022,848	+		AO353_18235	0.69	-0.4
4,022,848	+		AO353_18235	0.69	+0.8
4,022,848	+		AO353_18235	0.69	-0.4
4,022,848	+		AO353_18235	0.69	+0.8
4,022,848	+		AO353_18235	0.69	+1.3
4,022,848	+		AO353_18235	0.69	-1.8
4,022,848	+		AO353_18235	0.69	-0.6
4,022,849	-		AO353_18235	0.69	+3.8
4,022,849	-		AO353_18235	0.69	+0.1
4,022,849	-		AO353_18235	0.69	+1.2
4,022,849	-		AO353_18235	0.69	+0.1
4,022,849	-		AO353_18235	0.69	-0.1
4,022,849	-		AO353_18235	0.69	-1.0
4,022,849	-		AO353_18235	0.69	+0.2
4,022,849	-		AO353_18235	0.69	+0.1
4,022,849	-				-0.8
4,022,849	-		AO353_18235	0.69	-0.6
4,022,849	-				+0.8
4,022,929	+		AO353_18235	0.83	-0.3
4,022,930	-		AO353_18235	0.83	+0.5
4,023,039	+				-0.2
4,023,040	-				-1.2
4,023,040	-				-0.5
4,023,050	+				-0.9
4,023,050	+				+1.6
4,023,051	-				+1.1
4,023,051	-				-0.4
4,023,051	-				-0.2
4,023,067	+		AO353_18240	0.16	+0.4
4,023,068	-		AO353_18240	0.17	+2.5
4,023,262	+				+1.2
4,023,262	+				+0.8
4,023,262	+				+1.0
4,023,263	-				-1.2
4,023,263	-				+0.8
4,023,263	-				-0.2
4,023,263	-				-0.9
4,023,268	+				+1.0
4,023,269	-				+0.6
4,023,269	-				+0.2
4,023,285	+				-0.2
4,023,285	+				-0.8
4,023,285	+				-1.6
4,023,285	+				+0.6
4,023,285	+				+1.2
4,023,285	+				-0.2
4,023,285	+				+1.4
4,023,285	+				-0.4
4,023,285	+				+0.8
4,023,285	+				+0.4
4,023,286	-				+0.1
4,023,286	-				+3.1
4,023,286	-				+0.2
4,023,286	-				-0.7
4,023,286	-				-1.0
4,023,286	-				-1.0
4,023,286	-				+0.5
4,023,286	-				-0.7
4,023,286	-				-0.5
4,023,300	+				-0.4
4,023,300	+				-1.7
4,023,300	+				+0.8
4,023,300	+				+0.1
4,023,301	-				+0.5
4,023,301	-				-0.2
4,023,324	+				-1.1
4,023,324	+				+0.8
4,023,324	+				-1.0
4,023,324	+				-0.2
4,023,325	-				-0.1
4,023,414	+		AO353_18245	0.29	+0.2
4,023,569	-		AO353_18245	0.67	+0.8
4,023,629	-		AO353_18245	0.82	-0.8
4,023,686	+				-0.0
4,023,686	+				-1.6
4,023,686	+				+0.8
4,023,686	+				-1.4
4,023,686	+				-0.2
4,023,784	+				+1.0
4,023,785	-				-1.3
4,023,785	-				+0.6
4,023,823	+		AO353_18250	0.10	-0.4
4,023,823	+		AO353_18250	0.10	-0.2
4,023,823	+		AO353_18250	0.10	-0.7
4,023,823	+		AO353_18250	0.10	+0.7
4,023,823	+		AO353_18250	0.10	+0.4
4,023,823	+		AO353_18250	0.10	-0.3
4,023,823	+				-0.2
4,023,823	+		AO353_18250	0.10	-1.4
4,023,824	-		AO353_18250	0.10	-1.4
4,023,824	-		AO353_18250	0.10	-0.5
4,023,824	-		AO353_18250	0.10	+1.3
4,023,824	-		AO353_18250	0.10	-0.2
4,023,824	-		AO353_18250	0.10	+1.2
4,023,824	-		AO353_18250	0.10	+1.4
4,023,824	-		AO353_18250	0.10	+0.9
4,023,875	+		AO353_18250	0.14	-0.0
4,023,875	+		AO353_18250	0.14	+1.2
4,023,876	-		AO353_18250	0.14	+0.2
4,023,876	-		AO353_18250	0.14	-0.1
4,023,982	+		AO353_18250	0.22	+0.8
4,023,983	-		AO353_18250	0.22	-1.5
4,024,027	+		AO353_18250	0.25	+0.4
4,024,027	+		AO353_18250	0.25	-1.7
4,024,027	+		AO353_18250	0.25	+0.7
4,024,027	+		AO353_18250	0.25	+0.8
4,024,028	-		AO353_18250	0.25	+1.0
4,024,028	-		AO353_18250	0.25	-0.9
4,024,028	-		AO353_18250	0.25	+0.1
4,024,028	-		AO353_18250	0.25	+1.1
4,024,028	-		AO353_18250	0.25	+0.1
4,024,028	-		AO353_18250	0.25	+1.4
4,024,078	+		AO353_18250	0.29	+1.3
4,024,078	+		AO353_18250	0.29	-0.4
4,024,078	+		AO353_18250	0.29	-0.2
4,024,078	+		AO353_18250	0.29	+1.2
4,024,078	+		AO353_18250	0.29	-0.0
4,024,079	-		AO353_18250	0.29	-0.0
4,024,079	-		AO353_18250	0.29	+1.5
4,024,079	-		AO353_18250	0.29	+0.5
4,024,099	+		AO353_18250	0.31	-0.6
4,024,099	+		AO353_18250	0.31	-1.1
4,024,099	+		AO353_18250	0.31	-0.0
4,024,099	+		AO353_18250	0.31	-0.3
4,024,100	-		AO353_18250	0.31	+0.3
4,024,144	+		AO353_18250	0.34	-0.7
4,024,145	-		AO353_18250	0.34	+0.8
4,024,202	-		AO353_18250	0.38	+0.4
4,024,202	-		AO353_18250	0.38	+1.2
4,024,249	+		AO353_18250	0.42	-2.5
4,024,249	+		AO353_18250	0.42	-1.7
4,024,249	+		AO353_18250	0.42	-1.3
4,024,249	+		AO353_18250	0.42	+1.2
4,024,252	+		AO353_18250	0.42	+0.5
4,024,252	+		AO353_18250	0.42	+0.4
4,024,252	+		AO353_18250	0.42	-1.0
4,024,252	+		AO353_18250	0.42	-0.7
4,024,252	+		AO353_18250	0.42	-1.6
4,024,252	+		AO353_18250	0.42	-0.4
4,024,253	-		AO353_18250	0.42	-1.5
4,024,253	-		AO353_18250	0.42	+0.3
4,024,253	-		AO353_18250	0.42	-0.5