Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17910

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
3,944,188	+		AO353_17905	0.79	-1.0
3,944,188	+		AO353_17905	0.79	-0.3
3,944,188	+		AO353_17905	0.79	+1.8
3,944,188	+		AO353_17905	0.79	+2.0
3,944,188	+		AO353_17905	0.79	-0.4
3,944,188	+		AO353_17905	0.79	-0.5
3,944,189	-		AO353_17905	0.79	-0.8
3,944,189	-		AO353_17905	0.79	-0.1
3,944,227	-		AO353_17905	0.80	+0.4
3,944,227	-		AO353_17905	0.80	+0.7
3,944,227	-		AO353_17905	0.80	+2.2
3,944,474	-		AO353_17905	0.88	+0.3
3,944,474	-		AO353_17905	0.88	-0.6
3,944,565	-				+0.7
3,944,627	+				+0.6
3,944,628	-				-1.7
3,944,628	-				-0.2
3,944,668	+				-0.9
3,944,668	+				-0.2
3,944,668	+				-0.3
3,944,668	+				+1.0
3,944,668	+				-1.0
3,944,668	+				+0.4
3,944,668	+				+0.5
3,944,668	+				-0.8
3,944,668	+				-1.5
3,944,669	-				-0.8
3,944,669	-				+0.0
3,944,669	-				+0.7
3,944,669	-				-0.5
3,944,669	-				+0.3
3,944,669	-				-0.3
3,944,669	-				-1.0
3,944,669	-				+0.8
3,944,669	-				+0.8
3,944,669	-				-1.1
3,944,672	+				-1.0
3,944,672	+				-0.1
3,944,672	+				-0.0
3,944,672	+				-0.0
3,944,672	+				-0.8
3,944,672	+				-2.0
3,944,672	+				-2.7
3,944,672	+				+1.8
3,944,672	+				-0.7
3,944,672	+				+0.2
3,944,673	-				+0.3
3,944,673	-				+0.2
3,944,673	-				+0.2
3,944,674	+				-1.5
3,944,674	+				+1.4
3,944,674	+				-0.2
3,944,674	+				+0.6
3,944,674	+				+0.0
3,944,674	+				+0.3
3,944,674	+				-0.2
3,944,674	+				-2.1
3,944,674	+				+0.5
3,944,674	+				+1.6
3,944,674	+				+0.8
3,944,674	+				+0.8
3,944,674	+				-1.4
3,944,674	+				+0.8
3,944,674	+				-1.0
3,944,674	+				+0.4
3,944,674	+				+1.6
3,944,674	+				-0.8
3,944,674	+				+0.7
3,944,674	+				-1.5
3,944,674	+				-1.7
3,944,674	+				-0.4
3,944,674	+				-0.5
3,944,674	+				+0.2
3,944,674	+				-0.0
3,944,674	+				+0.9
3,944,674	+				-1.3
3,944,674	+				-0.1
3,944,674	+				+0.8
3,944,674	+				-1.0
3,944,674	+				-1.1
3,944,674	+				-0.0
3,944,674	+				+0.1
3,944,674	+				-1.0
3,944,674	+				-0.2
3,944,675	-				+1.6
3,944,675	-				-0.4
3,944,675	-				+0.5
3,944,675	-				+0.8
3,944,675	-				+2.2
3,944,675	-				+0.3
3,944,675	-				+1.4
3,944,675	-				+0.8
3,944,675	-				-0.5
3,944,675	-				-0.2
3,944,675	-				+0.8
3,944,675	-				-0.0
3,944,675	-				-0.2
3,944,675	-				-0.2
3,944,675	-				-2.0
3,944,675	-				-0.8
3,944,675	-				+0.1
3,944,675	-				+2.8
3,944,675	-				+1.6
3,944,675	-				+0.5
3,944,675	-				-1.4
3,944,675	-				+0.6
3,944,693	+				-0.8
3,944,716	+				-0.4
3,944,716	+				+1.3
3,944,716	+				+1.2
3,944,716	+				-1.2
3,944,717	-				-1.1
3,944,717	-				+0.2
3,944,826	-				-0.9
3,944,834	-				+0.9
3,944,927	+				-1.9
3,944,927	+				-0.4
3,944,928	-				-2.5
3,945,116	-				-0.5
3,945,116	-				+1.1
3,945,273	+		AO353_17910	0.44	+0.4
3,945,373	-		AO353_17910	0.68	+3.1
3,945,373	-		AO353_17910	0.68	-1.5
3,945,400	-		AO353_17910	0.75	+0.4
3,945,406	+		AO353_17910	0.77	-1.4
3,945,406	+		AO353_17910	0.77	+1.0
3,945,406	+		AO353_17910	0.77	+0.7
3,945,407	-		AO353_17910	0.77	-0.2
3,945,407	-		AO353_17910	0.77	-1.1
3,945,407	-		AO353_17910	0.77	-0.2
3,945,407	-		AO353_17910	0.77	+0.8
3,945,407	-		AO353_17910	0.77	+0.2
3,945,410	+		AO353_17910	0.78	-0.1
3,945,410	+		AO353_17910	0.78	-0.4
3,945,410	+		AO353_17910	0.78	-0.8
3,945,410	+		AO353_17910	0.78	-0.6
3,945,410	+		AO353_17910	0.78	-1.3
3,945,410	+		AO353_17910	0.78	-0.8
3,945,410	+		AO353_17910	0.78	-0.7
3,945,411	-		AO353_17910	0.78	-2.8
3,945,411	-		AO353_17910	0.78	-0.2
3,945,411	-		AO353_17910	0.78	+0.9
3,945,411	-		AO353_17910	0.78	+0.8
3,945,411	-		AO353_17910	0.78	-0.9
3,945,411	-		AO353_17910	0.78	-1.1
3,945,411	-		AO353_17910	0.78	+0.2
3,945,411	-		AO353_17910	0.78	+0.1
3,945,411	-		AO353_17910	0.78	-0.2
3,945,411	-		AO353_17910	0.78	+0.4
3,945,411	-		AO353_17910	0.78	+0.6
3,945,411	-		AO353_17910	0.78	+0.1
3,945,498	+				-1.7
3,945,498	+				-0.5
3,945,498	+				-0.5
3,945,498	+				+0.0
3,945,499	-				-1.4
3,945,557	+				+1.4
3,945,557	+				-0.1
3,945,558	-				+0.0
3,945,558	-				+0.3
3,945,586	+				-1.3
3,945,586	+				-0.5
3,945,586	+				-1.7
3,945,586	+				-0.2
3,945,586	+				+0.3
3,945,586	+				+0.1
3,945,586	+				+0.3
3,945,587	-				-2.0
3,945,587	-				-1.0
3,945,587	-				-1.8
3,945,587	-				+0.9
3,945,587	-				-0.8
3,945,587	-				+0.5
3,945,587	-				+0.2
3,945,587	-				-0.9
3,945,587	-				+0.8
3,945,739	+		AO353_17915	0.39	+0.7
3,945,740	-		AO353_17915	0.39	+1.0
3,945,854	+		AO353_17915	0.67	-0.5
3,945,854	+		AO353_17915	0.67	-0.7
3,945,881	+		AO353_17915	0.74	-0.1
3,945,881	+		AO353_17915	0.74	-2.4
3,945,881	+		AO353_17915	0.74	-1.1
3,945,881	+		AO353_17915	0.74	+0.5
3,945,881	+		AO353_17915	0.74	+1.2
3,945,881	+		AO353_17915	0.74	+2.8
3,945,881	+		AO353_17915	0.74	+0.6
3,945,881	+		AO353_17915	0.74	-2.5
3,945,881	+		AO353_17915	0.74	-0.8
3,945,882	-		AO353_17915	0.74	-0.5
3,945,882	-		AO353_17915	0.74	-0.4
3,945,882	-		AO353_17915	0.74	+0.2
3,945,882	-		AO353_17915	0.74	-0.8
3,945,882	-		AO353_17915	0.74	+0.2
3,945,882	-		AO353_17915	0.74	-1.1
3,945,970	+				+0.2
3,945,970	+				+0.6
3,945,970	+				-0.1
3,945,971	-				+0.9
3,945,971	-				-0.8
3,945,971	-				+0.8
3,945,971	-				-0.0
3,945,971	-				-0.9
3,946,015	-				+0.4
3,946,040	+				-2.5
3,946,040	+				-0.1
3,946,041	-				-1.0
3,946,041	-				-1.0
3,946,041	-				-2.3
3,946,041	-				-0.2
3,946,041	-				-0.9
3,946,064	-				-0.1
3,946,210	+		AO353_17920	0.11	+0.0
3,946,211	-		AO353_17920	0.11	-0.7
3,946,224	+		AO353_17920	0.12	-0.2
3,946,224	+		AO353_17920	0.12	+0.5
3,946,225	-		AO353_17920	0.12	+0.9
3,946,225	-		AO353_17920	0.12	+0.9
3,946,419	+		AO353_17920	0.26	+0.0
3,946,465	+		AO353_17920	0.29	-1.4
3,946,465	+		AO353_17920	0.29	+0.1
3,946,465	+		AO353_17920	0.29	-1.4
3,946,465	+		AO353_17920	0.29	-0.2
3,946,465	+		AO353_17920	0.29	-1.4
3,946,465	+		AO353_17920	0.29	+0.1
3,946,466	-		AO353_17920	0.29	-1.1
3,946,466	-		AO353_17920	0.29	+0.4
3,946,466	-		AO353_17920	0.29	-1.2
3,946,466	-		AO353_17920	0.29	-0.7
3,946,466	-		AO353_17920	0.29	+0.6
3,946,466	-		AO353_17920	0.29	+1.3
3,946,466	-		AO353_17920	0.29	-0.5