Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16915

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
3,742,002	+		AO353_16910	0.13	-0.2
3,742,002	+		AO353_16910	0.13	-2.7
3,742,002	+		AO353_16910	0.13	-1.0
3,742,002	+		AO353_16910	0.13	+0.8
3,742,002	+		AO353_16910	0.13	-0.2
3,742,002	+		AO353_16910	0.13	+1.5
3,742,002	+		AO353_16910	0.13	+3.8
3,742,002	+		AO353_16910	0.13	+0.2
3,742,003	-		AO353_16910	0.13	+0.3
3,742,003	-		AO353_16910	0.13	-2.6
3,742,003	-		AO353_16910	0.13	+0.4
3,742,003	-		AO353_16910	0.13	-1.2
3,742,003	-		AO353_16910	0.13	-0.4
3,742,003	-		AO353_16910	0.13	-0.9
3,742,003	-		AO353_16910	0.13	-1.1
3,742,018	-		AO353_16910	0.15	-0.1
3,742,101	+		AO353_16910	0.23	+0.7
3,742,101	+		AO353_16910	0.23	-1.9
3,742,101	+		AO353_16910	0.23	-1.7
3,742,102	-		AO353_16910	0.23	+1.1
3,742,102	-		AO353_16910	0.23	+0.0
3,742,102	-		AO353_16910	0.23	+0.2
3,742,102	-		AO353_16910	0.23	-1.3
3,742,102	-		AO353_16910	0.23	-1.9
3,742,103	+		AO353_16910	0.23	-0.7
3,742,104	-		AO353_16910	0.23	+0.8
3,742,104	-		AO353_16910	0.23	+0.0
3,742,104	-		AO353_16910	0.23	-0.6
3,742,143	+		AO353_16910	0.27	+1.4
3,742,144	-		AO353_16910	0.27	-0.2
3,742,182	+		AO353_16910	0.30	+0.1
3,742,182	+		AO353_16910	0.30	-0.2
3,742,267	+		AO353_16910	0.38	-0.5
3,742,267	+		AO353_16910	0.38	-1.3
3,742,267	+		AO353_16910	0.38	+0.9
3,742,267	+		AO353_16910	0.38	+0.5
3,742,267	+		AO353_16910	0.38	-1.5
3,742,267	+		AO353_16910	0.38	+0.5
3,742,267	+		AO353_16910	0.38	-1.2
3,742,267	+		AO353_16910	0.38	+2.3
3,742,267	+		AO353_16910	0.38	-1.2
3,742,267	+		AO353_16910	0.38	+0.0
3,742,267	+		AO353_16910	0.38	-0.5
3,742,267	+		AO353_16910	0.38	-0.9
3,742,267	+		AO353_16910	0.38	+0.2
3,742,267	+		AO353_16910	0.38	+1.2
3,742,267	+		AO353_16910	0.38	-1.2
3,742,267	+		AO353_16910	0.38	-0.5
3,742,267	+		AO353_16910	0.38	+0.3
3,742,268	-		AO353_16910	0.38	+0.4
3,742,268	-		AO353_16910	0.38	-0.1
3,742,268	-		AO353_16910	0.38	+0.8
3,742,272	-		AO353_16910	0.39	+0.6
3,742,272	-		AO353_16910	0.39	+0.6
3,742,272	-		AO353_16910	0.39	-0.9
3,742,272	-		AO353_16910	0.39	+0.0
3,742,272	-		AO353_16910	0.39	-0.2
3,742,272	-		AO353_16910	0.39	+0.6
3,742,272	-		AO353_16910	0.39	+1.0
3,742,272	-		AO353_16910	0.39	+1.7
3,742,272	-		AO353_16910	0.39	+1.6
3,742,272	-		AO353_16910	0.39	-0.5
3,742,272	-		AO353_16910	0.39	+0.7
3,742,272	-		AO353_16910	0.39	-2.0
3,742,272	-		AO353_16910	0.39	-0.0
3,742,272	-		AO353_16910	0.39	-0.0
3,742,272	-		AO353_16910	0.39	-0.7
3,742,291	+		AO353_16910	0.40	+1.0
3,742,292	-		AO353_16910	0.41	-1.2
3,742,455	-		AO353_16910	0.56	+1.3
3,742,607	+		AO353_16910	0.70	-2.2
3,742,607	+		AO353_16910	0.70	+0.8
3,742,607	+		AO353_16910	0.70	+2.0
3,742,608	-		AO353_16910	0.70	+1.0
3,742,608	-		AO353_16910	0.70	-2.0
3,742,608	-		AO353_16910	0.70	-0.2
3,742,611	+		AO353_16910	0.71	-0.2
3,742,611	+		AO353_16910	0.71	+0.2
3,742,611	+		AO353_16910	0.71	-0.4
3,742,611	+		AO353_16910	0.71	-1.3
3,742,611	+		AO353_16910	0.71	+0.4
3,742,611	+		AO353_16910	0.71	+0.3
3,742,612	-		AO353_16910	0.71	-0.3
3,742,612	-		AO353_16910	0.71	+0.7
3,742,612	-		AO353_16910	0.71	+0.9
3,742,612	-		AO353_16910	0.71	-0.1
3,742,637	+		AO353_16910	0.73	+0.6
3,742,637	+		AO353_16910	0.73	+0.1
3,742,637	+		AO353_16910	0.73	-1.1
3,742,637	+		AO353_16910	0.73	-0.0
3,742,637	+		AO353_16910	0.73	+0.5
3,742,638	-		AO353_16910	0.73	-1.3
3,742,638	-		AO353_16910	0.73	-1.3
3,742,638	-				+2.8
3,742,638	-		AO353_16910	0.73	+0.4
3,742,638	-		AO353_16910	0.73	-0.0
3,742,638	-		AO353_16910	0.73	+0.5
3,742,638	-		AO353_16910	0.73	-1.0
3,742,650	-		AO353_16910	0.74	-1.1
3,742,655	-		AO353_16910	0.75	+0.4
3,742,655	-		AO353_16910	0.75	+1.0
3,742,751	+		AO353_16910	0.84	-0.6
3,742,796	+		AO353_16910	0.88	-0.4
3,742,796	+		AO353_16910	0.88	+0.4
3,742,796	+		AO353_16910	0.88	-2.1
3,742,796	+		AO353_16910	0.88	-0.3
3,742,797	-		AO353_16910	0.88	+0.5
3,742,797	-		AO353_16910	0.88	+1.1
3,742,797	-		AO353_16910	0.88	-2.1
3,742,800	+		AO353_16910	0.88	-0.4
3,742,800	+		AO353_16910	0.88	-1.2
3,742,800	+		AO353_16910	0.88	+0.5
3,742,800	+		AO353_16910	0.88	-1.6
3,742,801	-		AO353_16910	0.89	+0.1
3,742,801	-		AO353_16910	0.89	-0.5
3,742,983	+				+0.3
3,742,983	+				+0.7
3,742,983	+				-0.6
3,742,983	+				+0.6
3,742,984	-				-0.5
3,742,984	-				-0.6
3,742,984	-				-0.5
3,742,990	+				+0.5
3,742,990	+				-1.9
3,742,990	+				+2.1
3,742,991	-				+1.1
3,743,154	+		AO353_16915	0.17	-0.8
3,743,191	+		AO353_16915	0.21	-0.9
3,743,191	+		AO353_16915	0.21	+0.5
3,743,191	+		AO353_16915	0.21	-1.2
3,743,201	+		AO353_16915	0.22	+0.2
3,743,201	+		AO353_16915	0.22	-1.8
3,743,201	+		AO353_16915	0.22	+0.8
3,743,201	+		AO353_16915	0.22	-0.2
3,743,202	-		AO353_16915	0.22	+0.1
3,743,202	-		AO353_16915	0.22	+1.1
3,743,202	-		AO353_16915	0.22	+0.7
3,743,202	-		AO353_16915	0.22	-0.4
3,743,202	-		AO353_16915	0.22	+0.0
3,743,202	-		AO353_16915	0.22	+0.8
3,743,202	-				-0.8
3,743,202	-		AO353_16915	0.22	-0.4
3,743,202	-		AO353_16915	0.22	+0.2
3,743,288	+		AO353_16915	0.31	+0.4
3,743,288	+		AO353_16915	0.31	-0.6
3,743,289	-		AO353_16915	0.31	-3.1
3,743,289	-		AO353_16915	0.31	-0.2
3,743,443	+		AO353_16915	0.48	-0.9
3,743,443	+		AO353_16915	0.48	+0.4
3,743,451	-		AO353_16915	0.48	-1.2
3,743,457	-		AO353_16915	0.49	+1.4
3,743,477	+		AO353_16915	0.51	-0.2
3,743,514	+		AO353_16915	0.55	+0.6
3,743,514	+		AO353_16915	0.55	+1.6
3,743,514	+		AO353_16915	0.55	+1.1
3,743,514	+		AO353_16915	0.55	-0.5
3,743,514	+		AO353_16915	0.55	-1.5
3,743,514	+		AO353_16915	0.55	+0.5
3,743,514	+		AO353_16915	0.55	+1.4
3,743,514	+		AO353_16915	0.55	+0.2
3,743,514	+		AO353_16915	0.55	-0.0
3,743,514	+		AO353_16915	0.55	+0.8
3,743,514	+		AO353_16915	0.55	+0.6
3,743,514	+		AO353_16915	0.55	+0.8
3,743,514	+		AO353_16915	0.55	-2.0
3,743,514	+		AO353_16915	0.55	+1.5
3,743,514	+		AO353_16915	0.55	-1.0
3,743,514	+		AO353_16915	0.55	+0.2
3,743,515	-		AO353_16915	0.55	+2.2
3,743,515	-		AO353_16915	0.55	-1.1
3,743,515	-		AO353_16915	0.55	+3.4
3,743,515	-		AO353_16915	0.55	+0.1
3,743,515	-		AO353_16915	0.55	+0.2
3,743,515	-		AO353_16915	0.55	+0.6
3,743,515	-		AO353_16915	0.55	-0.5
3,743,515	-		AO353_16915	0.55	+1.6
3,743,515	-		AO353_16915	0.55	-0.8
3,743,515	-		AO353_16915	0.55	+0.7
3,743,515	-		AO353_16915	0.55	-0.3
3,743,515	-		AO353_16915	0.55	+0.3
3,743,515	-		AO353_16915	0.55	+0.0
3,743,660	-		AO353_16915	0.70	-0.5
3,743,689	+		AO353_16915	0.73	+0.7
3,743,689	+		AO353_16915	0.73	+0.8
3,743,699	-		AO353_16915	0.74	+0.4
3,743,716	+		AO353_16915	0.76	-0.1
3,743,716	+		AO353_16915	0.76	-0.5
3,743,716	+		AO353_16915	0.76	-0.2
3,743,716	+		AO353_16915	0.76	+0.2
3,743,717	-		AO353_16915	0.76	-1.2
3,743,717	-		AO353_16915	0.76	+0.7
3,743,783	+		AO353_16915	0.83	-0.8
3,743,783	+		AO353_16915	0.83	-1.8
3,743,783	+		AO353_16915	0.83	+2.0
3,743,783	+		AO353_16915	0.83	+0.5
3,743,783	+		AO353_16915	0.83	+0.6
3,743,783	+		AO353_16915	0.83	+0.2
3,743,783	+		AO353_16915	0.83	-1.8
3,743,784	-		AO353_16915	0.83	+0.7
3,743,784	-		AO353_16915	0.83	-0.3
3,743,784	-		AO353_16915	0.83	+0.2
3,743,784	-		AO353_16915	0.83	-0.7
3,743,784	-		AO353_16915	0.83	+1.6
3,743,922	+				+0.7
3,743,923	-				+0.2
3,743,951	+				+0.2
3,743,951	+				-1.5
3,743,952	-				+0.6
3,743,972	-				-0.5