Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15290

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
3,376,655	-		AO353_15285	0.65	+0.6
3,376,883	+		AO353_15285	0.78	-0.1
3,376,883	+		AO353_15285	0.78	-0.5
3,376,883	+		AO353_15285	0.78	+1.3
3,376,883	+		AO353_15285	0.78	+0.5
3,376,883	+		AO353_15285	0.78	+0.6
3,376,883	+		AO353_15285	0.78	+0.7
3,376,883	+		AO353_15285	0.78	+0.2
3,376,883	+		AO353_15285	0.78	+0.7
3,376,883	+		AO353_15285	0.78	+0.9
3,376,883	+		AO353_15285	0.78	+2.4
3,376,883	+		AO353_15285	0.78	+0.5
3,376,883	+		AO353_15285	0.78	+0.7
3,376,884	-		AO353_15285	0.78	+1.5
3,376,884	-		AO353_15285	0.78	+1.4
3,376,884	-		AO353_15285	0.78	+1.0
3,376,884	-		AO353_15285	0.78	+1.4
3,376,884	-		AO353_15285	0.78	+0.1
3,376,884	-		AO353_15285	0.78	+3.8
3,376,884	-		AO353_15285	0.78	+0.2
3,376,884	-		AO353_15285	0.78	+1.5
3,377,001	+		AO353_15285	0.84	-0.6
3,377,001	+		AO353_15285	0.84	+0.4
3,377,001	+		AO353_15285	0.84	-0.0
3,377,001	+		AO353_15285	0.84	+0.6
3,377,001	+		AO353_15285	0.84	-2.0
3,377,001	+		AO353_15285	0.84	+1.7
3,377,002	-		AO353_15285	0.85	+1.5
3,377,002	-		AO353_15285	0.85	-0.5
3,377,002	-		AO353_15285	0.85	+2.5
3,377,002	-		AO353_15285	0.85	+1.3
3,377,002	-		AO353_15285	0.85	+0.5
3,377,002	-		AO353_15285	0.85	+1.2
3,377,003	+		AO353_15285	0.85	+0.9
3,377,003	+		AO353_15285	0.85	+1.0
3,377,003	+		AO353_15285	0.85	+0.4
3,377,003	+		AO353_15285	0.85	+1.7
3,377,004	-		AO353_15285	0.85	+1.0
3,377,004	-		AO353_15285	0.85	+1.0
3,377,004	-		AO353_15285	0.85	-0.1
3,377,004	-		AO353_15285	0.85	-1.4
3,377,004	-		AO353_15285	0.85	+0.4
3,377,004	-		AO353_15285	0.85	-0.0
3,377,004	-		AO353_15285	0.85	+0.2
3,377,004	-		AO353_15285	0.85	+0.0
3,377,004	-		AO353_15285	0.85	-0.8
3,377,283	+				-0.0
3,377,283	+				-0.2
3,377,283	+				+2.7
3,377,283	+				-0.6
3,377,283	+				+2.0
3,377,283	+				-0.2
3,377,283	+				+0.2
3,377,283	+				+1.0
3,377,283	+				+0.9
3,377,283	+				+1.0
3,377,283	+				-1.5
3,377,284	-				+1.6
3,377,284	-				+0.3
3,377,284	-				-0.4
3,377,284	-				-1.2
3,377,284	-				-0.6
3,377,284	-				-0.3
3,377,284	-				+2.2
3,377,284	-				-0.0
3,377,284	-				+0.2
3,377,284	-				+1.4
3,377,284	-				-0.2
3,377,284	-				+0.7
3,377,284	-				+1.8
3,377,284	-				-0.2
3,377,284	-				+0.4
3,377,284	-				-0.4
3,377,308	+				+0.2
3,377,308	+				+1.1
3,377,308	+				-0.0
3,377,309	-				+0.2
3,377,309	-				-0.8
3,377,321	+				-1.2
3,377,322	-				-1.5
3,377,322	-				+0.8
3,377,350	-				-0.7
3,377,371	+				-1.1
3,377,372	-				-1.0
3,377,372	-				-1.2
3,377,372	-				-2.3
3,377,380	+				+1.7
3,377,380	+				+0.2
3,377,380	+				-0.2
3,377,380	+				-0.5
3,377,380	+				-0.2
3,377,380	+				-0.2
3,377,380	+				-1.5
3,377,381	-				-0.7
3,377,381	-				-0.0
3,377,381	-				-3.0
3,377,381	-				-2.1
3,377,381	-				-2.2
3,377,381	-				-2.2
3,377,388	-				-2.4
3,377,432	+				-1.0
3,377,433	-				-1.1
3,377,433	-				-1.8
3,377,447	+				+0.2
3,377,447	+				-1.6
3,377,448	-				-1.4
3,377,454	+				-0.9
3,377,454	+				-1.1
3,377,455	-				-1.0
3,377,455	-				-3.0
3,377,532	+				-1.2
3,377,532	+				-1.8
3,377,532	+				-0.2
3,377,532	+				-0.6
3,377,532	+				-0.2
3,377,532	+				+0.4
3,377,532	+				-2.1
3,377,533	-				-1.0
3,377,533	-				-1.7
3,377,533	-				-1.6
3,377,533	-				-1.1
3,377,533	-				-2.1
3,377,796	+		AO353_15290	0.35	-1.2
3,377,828	+		AO353_15290	0.39	-1.5
3,377,828	+		AO353_15290	0.39	-0.9
3,377,828	+		AO353_15290	0.39	-1.4
3,377,829	-		AO353_15290	0.39	-1.2
3,377,829	-		AO353_15290	0.39	+0.6
3,377,829	-		AO353_15290	0.39	-2.3
3,377,829	-		AO353_15290	0.39	-0.8
3,377,829	-		AO353_15290	0.39	-2.3
3,377,836	+		AO353_15290	0.40	-1.9
3,377,836	+		AO353_15290	0.40	-1.4
3,377,836	+		AO353_15290	0.40	-1.4
3,377,836	+		AO353_15290	0.40	-0.2
3,377,836	+		AO353_15290	0.40	+0.6
3,377,836	+		AO353_15290	0.40	-1.1
3,377,837	-				-1.0
3,377,837	-				+0.4
3,377,837	-		AO353_15290	0.40	+1.4
3,377,837	-		AO353_15290	0.40	-0.8
3,377,837	-		AO353_15290	0.40	-2.0
3,377,837	-		AO353_15290	0.40	-2.1
3,377,837	-		AO353_15290	0.40	-2.8
3,377,837	-		AO353_15290	0.40	-2.4
3,377,965	+		AO353_15290	0.54	+0.5
3,377,982	-		AO353_15290	0.56	-2.2
3,377,995	-		AO353_15290	0.58	-0.6
3,377,995	-		AO353_15290	0.58	-3.0
3,378,043	+		AO353_15290	0.63	-2.7
3,378,043	+		AO353_15290	0.63	-1.5
3,378,043	+		AO353_15290	0.63	+1.0
3,378,043	+		AO353_15290	0.63	-1.2
3,378,043	+		AO353_15290	0.63	-0.6
3,378,043	+		AO353_15290	0.63	-0.8
3,378,044	-		AO353_15290	0.63	-0.6
3,378,044	-		AO353_15290	0.63	-0.3
3,378,044	-		AO353_15290	0.63	-0.9
3,378,044	-		AO353_15290	0.63	-2.1
3,378,044	-		AO353_15290	0.63	-0.4
3,378,149	+		AO353_15290	0.75	-1.5
3,378,149	+		AO353_15290	0.75	+0.4
3,378,239	+		AO353_15290	0.86	-2.1
3,378,239	+		AO353_15290	0.86	+1.5
3,378,239	+		AO353_15290	0.86	-0.7
3,378,239	+		AO353_15290	0.86	-1.6
3,378,327	+				-1.2
3,378,327	+				-0.9
3,378,328	-				-3.6
3,378,328	-				-1.5
3,378,360	+				-1.8
3,378,361	-				-1.5
3,378,375	+				+1.0
3,378,375	+				-0.2
3,378,375	+				-1.0
3,378,376	-				-1.5
3,378,376	-				+0.1
3,378,376	-				-3.3
3,378,395	-				-1.0
3,378,834	+				+0.1
3,378,834	+				-0.4
3,378,834	+				-0.3
3,378,834	+				+0.4
3,378,835	-				-0.8
3,378,835	-				-0.6
3,378,835	-				-0.6
3,378,835	-				-2.1
3,378,835	-				-2.1
3,378,837	+				-1.7
3,378,837	+				+0.2
3,378,838	-				-2.0
3,378,838	-				-1.9
3,378,838	-				-0.9
3,378,880	+				+0.2
3,378,880	+				+0.2
3,378,880	+				+2.0
3,378,880	+				-1.4
3,378,880	+				+0.0
3,378,881	-				-1.7
3,378,881	-				-1.0
3,378,881	-				-1.5
3,378,911	+				+0.4
3,378,911	+				-0.3
3,378,928	+				-1.8
3,378,929	-				-1.7
3,378,951	+				+0.2
3,378,977	+				-0.8
3,379,043	+				-1.4
3,379,051	+				+2.2
3,379,115	+				-0.7
3,379,115	+				-0.0
3,379,115	+				+0.0
3,379,115	+				+0.3
3,379,115	+				-0.4
3,379,115	+				-0.7
3,379,115	+				-0.3
3,379,115	+				-0.6
3,379,117	+				+1.0
3,379,117	+				-0.2
3,379,215	+				-2.4
3,379,295	+		AO353_15295	0.22	-0.6
3,379,295	+		AO353_15295	0.22	-0.8
3,379,295	+		AO353_15295	0.22	+0.2
3,379,328	+		AO353_15295	0.29	-0.8
3,379,328	+		AO353_15295	0.29	+0.6
3,379,328	+		AO353_15295	0.29	+1.7
3,379,328	+		AO353_15295	0.29	+1.5
3,379,328	+		AO353_15295	0.29	-0.6
3,379,328	+		AO353_15295	0.29	-0.9
3,379,328	+		AO353_15295	0.29	-0.3
3,379,328	+		AO353_15295	0.29	-1.3
3,379,328	+		AO353_15295	0.29	+2.0
3,379,328	+		AO353_15295	0.29	-0.7
3,379,328	+		AO353_15295	0.29	-1.0