Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13960

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
3,100,131	+		AO353_13955	0.11	-0.7
3,100,131	+		AO353_13955	0.11	+0.5
3,100,131	+		AO353_13955	0.11	+1.3
3,100,131	+		AO353_13955	0.11	+1.3
3,100,131	+		AO353_13955	0.11	-0.4
3,100,131	+		AO353_13955	0.11	+1.4
3,100,131	+		AO353_13955	0.11	-1.3
3,100,132	-		AO353_13955	0.11	+0.1
3,100,132	-		AO353_13955	0.11	+0.3
3,100,132	-		AO353_13955	0.11	+0.2
3,100,132	-		AO353_13955	0.11	+0.1
3,100,132	-		AO353_13955	0.11	+0.3
3,100,132	-		AO353_13955	0.11	+0.8
3,100,132	-		AO353_13955	0.11	-0.9
3,100,132	-		AO353_13955	0.11	+0.6
3,100,132	-		AO353_13955	0.11	+0.5
3,100,143	+		AO353_13955	0.13	+1.8
3,100,143	+		AO353_13955	0.13	+0.6
3,100,143	+		AO353_13955	0.13	-0.7
3,100,148	+		AO353_13955	0.13	-0.5
3,100,148	+		AO353_13955	0.13	+1.0
3,100,148	+		AO353_13955	0.13	+0.1
3,100,148	+		AO353_13955	0.13	-0.1
3,100,148	+		AO353_13955	0.13	+2.1
3,100,148	+		AO353_13955	0.13	-0.1
3,100,149	-		AO353_13955	0.13	+0.9
3,100,149	-		AO353_13955	0.13	-0.0
3,100,149	-		AO353_13955	0.13	+0.3
3,100,149	-		AO353_13955	0.13	+0.6
3,100,149	-		AO353_13955	0.13	+1.7
3,100,149	-		AO353_13955	0.13	+0.8
3,100,149	-		AO353_13955	0.13	-0.5
3,100,164	+		AO353_13955	0.15	-0.5
3,100,164	+		AO353_13955	0.15	-0.8
3,100,165	-		AO353_13955	0.16	+2.3
3,100,165	-		AO353_13955	0.16	+1.2
3,100,165	-		AO353_13955	0.16	-1.1
3,100,304	+		AO353_13955	0.35	+0.1
3,100,304	+		AO353_13955	0.35	+2.1
3,100,304	+		AO353_13955	0.35	-0.1
3,100,304	+		AO353_13955	0.35	+0.2
3,100,304	+		AO353_13955	0.35	+0.5
3,100,305	-		AO353_13955	0.35	-0.1
3,100,305	-		AO353_13955	0.35	+0.6
3,100,305	-		AO353_13955	0.35	+1.3
3,100,339	+		AO353_13955	0.40	+0.5
3,100,340	-		AO353_13955	0.40	-1.5
3,100,348	+		AO353_13955	0.41	+0.3
3,100,348	+		AO353_13955	0.41	-0.4
3,100,359	-		AO353_13955	0.43	-1.8
3,100,397	+		AO353_13955	0.48	+0.1
3,100,397	+		AO353_13955	0.48	-1.3
3,100,398	-		AO353_13955	0.48	+0.1
3,100,398	-		AO353_13955	0.48	-0.9
3,100,398	-		AO353_13955	0.48	+0.3
3,100,416	+		AO353_13955	0.51	-1.2
3,100,416	+		AO353_13955	0.51	+0.1
3,100,416	+		AO353_13955	0.51	-0.2
3,100,416	+		AO353_13955	0.51	+0.7
3,100,416	+		AO353_13955	0.51	-0.3
3,100,467	+		AO353_13955	0.58	-0.9
3,100,467	+		AO353_13955	0.58	+1.9
3,100,468	-		AO353_13955	0.58	-0.1
3,100,468	-		AO353_13955	0.58	+0.3
3,100,490	+		AO353_13955	0.61	-0.7
3,100,490	+		AO353_13955	0.61	+0.3
3,100,490	+		AO353_13955	0.61	+0.3
3,100,490	+		AO353_13955	0.61	+2.8
3,100,491	-		AO353_13955	0.61	-1.8
3,100,491	-		AO353_13955	0.61	+0.3
3,100,491	-		AO353_13955	0.61	+0.8
3,100,491	-		AO353_13955	0.61	-0.6
3,100,536	+		AO353_13955	0.67	+2.1
3,100,548	+		AO353_13955	0.69	+0.1
3,100,549	-		AO353_13955	0.69	-2.3
3,100,558	+		AO353_13955	0.70	+0.9
3,100,558	+		AO353_13955	0.70	-1.4
3,100,558	+		AO353_13955	0.70	+0.3
3,100,559	-		AO353_13955	0.71	-1.6
3,100,574	-		AO353_13955	0.73	+0.7
3,100,598	-		AO353_13955	0.76	+1.4
3,100,602	-		AO353_13955	0.77	-1.8
3,100,602	-		AO353_13955	0.77	-0.7
3,100,664	-		AO353_13955	0.85	-0.1
3,100,664	-		AO353_13955	0.85	-1.8
3,100,705	+				-1.8
3,100,763	+				-0.5
3,100,823	+				+1.5
3,100,837	-				+0.1
3,100,842	-				-1.4
3,100,848	+				-0.1
3,100,879	+				+0.4
3,100,879	+				-1.5
3,100,954	+				-0.2
3,100,961	-				+0.9
3,100,964	-				-0.6
3,100,966	+				-0.6
3,100,966	+				-0.5
3,100,967	-				-2.3
3,100,967	-				-0.7
3,100,969	+				-0.3
3,100,970	-				-1.1
3,100,975	+				-1.3
3,100,976	-				-0.9
3,100,978	-				-1.1
3,101,010	-				-1.0
3,101,021	-				+0.8
3,101,038	+				+1.0
3,101,038	+				+1.7
3,101,044	+				-0.2
3,101,044	+				-0.5
3,101,045	-				-0.2
3,101,100	+				+0.2
3,101,100	+				-0.0
3,101,100	+				-0.8
3,101,100	+				+0.6
3,101,100	+				-0.4
3,101,100	+				-0.0
3,101,101	-				+0.5
3,101,101	-				+1.5
3,101,101	-				+0.6
3,101,101	-				-0.5
3,101,101	-				-1.4
3,101,101	-				-0.8
3,101,101	-				+0.1
3,101,101	-				+0.7
3,101,101	-				-1.6
3,101,189	+				+0.1
3,101,189	+				-1.4
3,101,189	+				-0.7
3,101,189	+				-0.0
3,101,190	-				+1.1
3,101,190	-				+1.7
3,101,190	-				+0.1
3,101,193	+		AO353_13960	0.10	-1.3
3,101,193	+		AO353_13960	0.10	-0.6
3,101,193	+		AO353_13960	0.10	+0.6
3,101,193	+		AO353_13960	0.10	-0.2
3,101,193	+		AO353_13960	0.10	+0.9
3,101,193	+		AO353_13960	0.10	+0.6
3,101,193	+		AO353_13960	0.10	+3.1
3,101,193	+		AO353_13960	0.10	+0.5
3,101,193	+		AO353_13960	0.10	-1.9
3,101,193	+		AO353_13960	0.10	+0.1
3,101,193	+		AO353_13960	0.10	-0.0
3,101,193	+		AO353_13960	0.10	-0.8
3,101,193	+		AO353_13960	0.10	-1.5
3,101,193	+		AO353_13960	0.10	+1.6
3,101,194	-		AO353_13960	0.10	-0.5
3,101,194	-		AO353_13960	0.10	+0.8
3,101,194	-		AO353_13960	0.10	-0.5
3,101,194	-		AO353_13960	0.10	-1.3
3,101,194	-		AO353_13960	0.10	+0.2
3,101,194	-		AO353_13960	0.10	+1.4
3,101,194	-		AO353_13960	0.10	-0.5
3,101,196	+		AO353_13960	0.11	+0.6
3,101,196	+		AO353_13960	0.11	+0.7
3,101,196	+		AO353_13960	0.11	-1.7
3,101,197	-		AO353_13960	0.11	+0.9
3,101,197	-		AO353_13960	0.11	-0.5
3,101,197	-		AO353_13960	0.11	+1.7
3,101,197	-		AO353_13960	0.11	+0.9
3,101,251	-		AO353_13960	0.18	-1.4
3,101,269	-		AO353_13960	0.20	+1.4
3,101,269	-		AO353_13960	0.20	-0.5
3,101,273	+		AO353_13960	0.21	-0.1
3,101,274	-		AO353_13960	0.21	+1.2
3,101,284	+		AO353_13960	0.22	-1.6
3,101,284	+		AO353_13960	0.22	-0.3
3,101,284	+		AO353_13960	0.22	-1.3
3,101,284	+		AO353_13960	0.22	+0.5
3,101,285	-		AO353_13960	0.22	+0.4
3,101,285	-		AO353_13960	0.22	+1.2
3,101,285	-		AO353_13960	0.22	+0.9
3,101,355	+		AO353_13960	0.31	-0.1
3,101,381	+		AO353_13960	0.34	-0.3
3,101,381	+		AO353_13960	0.34	+0.8
3,101,388	+		AO353_13960	0.35	+1.6
3,101,456	+		AO353_13960	0.44	-0.9
3,101,456	+		AO353_13960	0.44	-0.1
3,101,456	+		AO353_13960	0.44	+0.8
3,101,456	+		AO353_13960	0.44	+0.4
3,101,456	+		AO353_13960	0.44	-0.6
3,101,456	+		AO353_13960	0.44	+0.9
3,101,456	+		AO353_13960	0.44	+0.7
3,101,456	+		AO353_13960	0.44	+2.8
3,101,456	+		AO353_13960	0.44	-0.7
3,101,456	+		AO353_13960	0.44	-1.3
3,101,456	+		AO353_13960	0.44	+1.2
3,101,456	+		AO353_13960	0.44	-0.0
3,101,456	+		AO353_13960	0.44	-0.7
3,101,456	+		AO353_13960	0.44	-0.3
3,101,457	-		AO353_13960	0.44	-0.4
3,101,457	-		AO353_13960	0.44	+0.1
3,101,457	-		AO353_13960	0.44	+0.5
3,101,457	-		AO353_13960	0.44	-0.6
3,101,457	-		AO353_13960	0.44	-0.8
3,101,457	-		AO353_13960	0.44	+0.7
3,101,457	-		AO353_13960	0.44	-0.8
3,101,457	-		AO353_13960	0.44	-1.1
3,101,457	-		AO353_13960	0.44	+0.8
3,101,462	+		AO353_13960	0.45	-1.3
3,101,463	-		AO353_13960	0.45	+1.4
3,101,463	-		AO353_13960	0.45	-0.8
3,101,551	+		AO353_13960	0.56	-0.0
3,101,551	+		AO353_13960	0.56	-1.3
3,101,551	+		AO353_13960	0.56	+0.8
3,101,551	+		AO353_13960	0.56	+0.1
3,101,551	+		AO353_13960	0.56	+0.1
3,101,551	+		AO353_13960	0.56	-0.2
3,101,551	+		AO353_13960	0.56	+0.2
3,101,551	+		AO353_13960	0.56	+0.1
3,101,551	+		AO353_13960	0.56	+0.1
3,101,551	+		AO353_13960	0.56	+0.5
3,101,551	+		AO353_13960	0.56	-0.5
3,101,551	+		AO353_13960	0.56	-1.5
3,101,551	+		AO353_13960	0.56	+0.7
3,101,551	+		AO353_13960	0.56	-0.7
3,101,551	+		AO353_13960	0.56	+0.7
3,101,551	+		AO353_13960	0.56	+0.1
3,101,551	+		AO353_13960	0.56	+0.9
3,101,551	+		AO353_13960	0.56	+0.1
3,101,551	+		AO353_13960	0.56	+0.8
3,101,551	+		AO353_13960	0.56	+0.0
3,101,552	-		AO353_13960	0.56	-1.4
3,101,552	-		AO353_13960	0.56	+0.7
3,101,552	-		AO353_13960	0.56	-0.5
3,101,552	-		AO353_13960	0.56	+0.5
3,101,552	-		AO353_13960	0.56	-1.1
3,101,552	-		AO353_13960	0.56	-0.3
3,101,552	-		AO353_13960	0.56	+0.1
3,101,552	-		AO353_13960	0.56	-1.8
3,101,552	-		AO353_13960	0.56	-1.2
3,101,552	-		AO353_13960	0.56	-1.1
3,101,552	-		AO353_13960	0.56	-1.1
3,101,553	+		AO353_13960	0.57	+0.5
3,101,553	+		AO353_13960	0.57	+0.8
3,101,554	-		AO353_13960	0.57	-0.8
3,101,554	-		AO353_13960	0.57	-0.4
3,101,554	-		AO353_13960	0.57	+1.8
3,101,617	+		AO353_13960	0.65	-0.0
3,101,617	+		AO353_13960	0.65	-1.5
3,101,617	+		AO353_13960	0.65	-0.6
3,101,617	+		AO353_13960	0.65	-0.9
3,101,617	+		AO353_13960	0.65	-0.6
3,101,617	+		AO353_13960	0.65	+1.4
3,101,617	+		AO353_13960	0.65	+0.4
3,101,618	-		AO353_13960	0.65	-1.0
3,101,618	-		AO353_13960	0.65	+1.1
3,101,618	-		AO353_13960	0.65	-1.4
3,101,618	-		AO353_13960	0.65	+0.2
3,101,618	-		AO353_13960	0.65	+1.7
3,101,637	+		AO353_13960	0.67	+0.9
3,101,638	-		AO353_13960	0.68	-0.1
3,101,649	+		AO353_13960	0.69	+1.1
3,101,649	+		AO353_13960	0.69	-0.1
3,101,649	+		AO353_13960	0.69	+2.0
3,101,650	-		AO353_13960	0.69	+0.1
3,101,751	+		AO353_13960	0.82	+0.2
3,101,881	+				-0.4
3,101,881	+				+0.6
3,101,881	+				-1.9
3,101,882	-				-0.1
3,101,882	-				-0.5
3,101,882	-				+0.1
3,101,887	+				+0.2
3,101,888	-				+0.5
3,101,917	+				-0.4
3,101,918	-				+1.1
3,101,921	-				+0.5
3,101,921	-				+0.5
3,101,921	-				-1.5
3,101,943	+				+0.1
3,101,943	+				-0.4
3,101,943	+				+0.9
3,101,943	+				+0.1
3,101,943	+				-0.1
3,101,943	+				+0.9
3,101,944	-				+2.1
3,101,944	-				-1.4
3,102,060	+		AO353_13965	0.30	+1.3
3,102,120	+		AO353_13965	0.45	+0.1
3,102,120	+		AO353_13965	0.45	-1.4
3,102,121	-		AO353_13965	0.45	-1.0
3,102,121	-		AO353_13965	0.45	+1.5
3,102,125	+		AO353_13965	0.46	+1.6
3,102,306	+		AO353_13965	0.90	-1.5
3,102,306	+		AO353_13965	0.90	+1.2
3,102,306	+		AO353_13965	0.90	-2.3
3,102,306	+		AO353_13965	0.90	-0.8
3,102,306	+		AO353_13965	0.90	+1.0
3,102,306	+		AO353_13965	0.90	-3.4
3,102,306	+		AO353_13965	0.90	+1.7
3,102,306	+		AO353_13965	0.90	+0.4
3,102,306	+		AO353_13965	0.90	+0.6
3,102,306	+		AO353_13965	0.90	+0.5
3,102,307	-				-0.9
3,102,307	-				-0.4
3,102,307	-				+1.9
3,102,307	-				+0.2
3,102,307	-				+0.9
3,102,307	-				+0.1
3,102,307	-				-0.1
3,102,307	-				-0.5
3,102,307	-				-0.3
3,102,307	-				+0.4
3,102,348	+				+1.1
3,102,348	+				-0.8
3,102,348	+				-1.3
3,102,348	+				+1.1
3,102,348	+				+0.0
3,102,348	+				-1.2
3,102,348	+				+0.5
3,102,348	+				-1.3
3,102,348	+				-0.5
3,102,349	-				-1.1
3,102,349	-				-0.5
3,102,349	-				+1.3
3,102,349	-				-0.4
3,102,349	-				-0.0
3,102,349	-				+1.6
3,102,349	-				-1.8
3,102,349	-				-0.6
3,102,349	-				-1.5
3,102,349	-				-1.1
3,102,353	+				+0.2
3,102,353	+				-1.5
3,102,353	+				+0.6
3,102,354	-				+0.7
3,102,363	+				+0.2
3,102,363	+				+0.8
3,102,363	+				-0.3
3,102,364	-				+2.1
3,102,389	+				-1.6
3,102,389	+				+1.0
3,102,389	+				+0.2
3,102,390	-				+0.1
3,102,390	-				-0.2
3,102,390	-				-1.4
3,102,390	-				-2.7
3,102,390	-				-1.6
3,102,422	+				+0.1
3,102,422	+				+0.4
3,102,422	+				+0.4
3,102,422	+				-0.9
3,102,422	+				-0.6
3,102,422	+				+0.1
3,102,422	+				-1.3
3,102,423	-				+0.5
3,102,423	-				-1.9
3,102,423	-				-1.2
3,102,423	-				-0.4
3,102,423	-				+0.2
3,102,423	-				-0.5
3,102,423	-				-0.9
3,102,423	-				-0.2
3,102,423	-				+0.1
3,102,423	-				+0.1
3,102,423	-				-0.1
3,102,423	-				-1.3
3,102,426	+				+0.3
3,102,426	+				+1.5
3,102,426	+				-0.6
3,102,426	+				-1.5
3,102,426	+				-1.8
3,102,426	+				-0.6
3,102,426	+				-0.5
3,102,426	+				-1.3
3,102,426	+				-0.7
3,102,426	+				+0.3
3,102,426	+				-0.1
3,102,426	+				+1.6
3,102,426	+				-0.0
3,102,426	+				-0.6
3,102,427	-				+0.2
3,102,427	-				+0.1
3,102,427	-				-0.9
3,102,427	-				-0.7
3,102,427	-				-0.2
3,102,427	-				-1.2
3,102,427	-				-1.3
3,102,427	-				+0.6
3,102,427	-				+0.2
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3,102,514	-				-1.4
3,102,554	+				+0.5
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3,102,885	-		AO353_13970	0.16	-0.1