Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11605

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
2,562,224	+				-0.2
2,562,236	+				-0.5
2,562,237	-				-0.0
2,562,377	+				+0.0
2,562,377	+				+0.3
2,562,377	+				+0.4
2,562,394	+				+2.3
2,562,394	+				+0.1
2,562,394	+				-0.8
2,562,394	+				+0.7
2,562,394	+				-0.9
2,562,394	+				-0.0
2,562,394	+				+0.2
2,562,394	+				-0.0
2,562,394	+				+0.4
2,562,394	+				+0.7
2,562,394	+				+0.3
2,562,394	+				+1.2
2,562,394	+				+0.4
2,562,394	+				+0.4
2,562,394	+				-0.2
2,562,394	+				+1.2
2,562,395	-				-0.3
2,562,395	-				+0.6
2,562,395	-				+0.7
2,562,395	-				+2.1
2,562,395	-				+0.1
2,562,395	-				-0.3
2,562,395	-				-2.5
2,562,395	-				+0.5
2,562,395	-				-0.4
2,562,395	-				-1.2
2,562,395	-				-1.4
2,562,395	-				+1.1
2,562,395	-				+0.7
2,562,395	-				-0.7
2,562,395	-				+1.7
2,562,395	-				-1.1
2,562,395	-				-0.2
2,562,395	-				+1.2
2,562,395	-				+0.2
2,562,395	-				+1.2
2,562,395	-				+1.1
2,562,429	+				-0.4
2,562,430	-				-0.0
2,562,430	-				+0.9
2,562,451	-				-2.5
2,562,468	-				+0.6
2,562,496	-				-0.6
2,562,514	-				-0.7
2,562,584	+				+1.1
2,562,584	+				-1.9
2,562,585	-				+0.3
2,562,627	+				-1.8
2,562,627	+				-0.4
2,562,628	-				-0.9
2,562,628	-				-1.9
2,562,719	+		AO353_11600	0.22	-0.9
2,562,719	+		AO353_11600	0.22	-0.8
2,562,719	+		AO353_11600	0.22	+0.9
2,562,720	-		AO353_11600	0.22	+0.4
2,562,720	-		AO353_11600	0.22	+1.2
2,562,720	-		AO353_11600	0.22	+0.6
2,562,720	-		AO353_11600	0.22	+1.4
2,562,743	+		AO353_11600	0.26	+0.3
2,562,743	+		AO353_11600	0.26	-0.2
2,562,743	+		AO353_11600	0.26	+0.3
2,562,744	-		AO353_11600	0.26	-1.2
2,562,744	-		AO353_11600	0.26	-1.4
2,562,744	-		AO353_11600	0.26	-0.4
2,562,744	-		AO353_11600	0.26	-1.0
2,562,744	-		AO353_11600	0.26	-1.5
2,562,744	-		AO353_11600	0.26	-0.2
2,562,744	-		AO353_11600	0.26	-0.0
2,562,744	-		AO353_11600	0.26	+0.2
2,562,744	-		AO353_11600	0.26	+0.6
2,562,794	+		AO353_11600	0.33	+0.2
2,562,794	+		AO353_11600	0.33	+0.4
2,562,795	-		AO353_11600	0.33	+0.5
2,562,875	+		AO353_11600	0.45	-1.3
2,562,875	+		AO353_11600	0.45	-1.0
2,562,875	+		AO353_11600	0.45	+2.1
2,562,974	+		AO353_11600	0.60	-1.0
2,562,974	+		AO353_11600	0.60	+3.0
2,563,088	+		AO353_11600	0.77	+2.5
2,563,088	+		AO353_11600	0.77	+0.3
2,563,088	+		AO353_11600	0.77	-0.3
2,563,088	+		AO353_11600	0.77	+0.5
2,563,088	+		AO353_11600	0.77	+0.7
2,563,088	+		AO353_11600	0.77	+0.9
2,563,088	+		AO353_11600	0.77	+1.0
2,563,089	-		AO353_11600	0.78	+0.1
2,563,089	-		AO353_11600	0.78	-0.0
2,563,089	-		AO353_11600	0.78	-0.6
2,563,089	-		AO353_11600	0.78	+0.2
2,563,089	-		AO353_11600	0.78	-0.0
2,563,089	-		AO353_11600	0.78	-0.6
2,563,089	-		AO353_11600	0.78	-1.4
2,563,103	+		AO353_11600	0.80	+1.1
2,563,103	+		AO353_11600	0.80	+0.6
2,563,103	+		AO353_11600	0.80	+0.3
2,563,103	+		AO353_11600	0.80	-0.0
2,563,103	+		AO353_11600	0.80	+1.2
2,563,103	+		AO353_11600	0.80	+0.5
2,563,104	-		AO353_11600	0.80	-0.2
2,563,104	-		AO353_11600	0.80	+0.6
2,563,104	-		AO353_11600	0.80	-0.9
2,563,104	-		AO353_11600	0.80	-0.0
2,563,104	-		AO353_11600	0.80	-2.4
2,563,104	-		AO353_11600	0.80	-0.0
2,563,104	-		AO353_11600	0.80	+0.2
2,563,104	-		AO353_11600	0.80	+1.1
2,563,104	-		AO353_11600	0.80	+0.6
2,563,104	-		AO353_11600	0.80	-1.0
2,563,104	-		AO353_11600	0.80	+0.0
2,563,115	+		AO353_11600	0.82	+0.3
2,563,115	+		AO353_11600	0.82	-0.3
2,563,115	+		AO353_11600	0.82	-0.5
2,563,115	+		AO353_11600	0.82	-1.0
2,563,116	-		AO353_11600	0.82	+0.3
2,563,116	-		AO353_11600	0.82	+0.4
2,563,116	-		AO353_11600	0.82	-1.1
2,563,116	-		AO353_11600	0.82	-0.3
2,563,116	-		AO353_11600	0.82	+0.4
2,563,116	-		AO353_11600	0.82	-0.3
2,563,118	+		AO353_11600	0.82	+1.1
2,563,118	+		AO353_11600	0.82	+0.8
2,563,118	+		AO353_11600	0.82	+0.1
2,563,118	+		AO353_11600	0.82	-0.2
2,563,119	-		AO353_11600	0.82	+0.1
2,563,127	+		AO353_11600	0.83	+0.2
2,563,127	+		AO353_11600	0.83	-0.2
2,563,128	-		AO353_11600	0.83	+2.0
2,563,264	+				+0.4
2,563,264	+				+1.0
2,563,264	+				-1.5
2,563,264	+				+0.4
2,563,264	+				-1.4
2,563,265	-				-1.6
2,563,265	-				+2.3
2,563,338	+		AO353_11605	0.18	+0.7
2,563,338	+		AO353_11605	0.18	+0.8
2,563,339	-		AO353_11605	0.18	-0.9
2,563,392	+		AO353_11605	0.26	-0.6
2,563,392	+		AO353_11605	0.26	-1.2
2,563,392	+		AO353_11605	0.26	-0.3
2,563,392	+		AO353_11605	0.26	-0.9
2,563,392	+		AO353_11605	0.26	-1.6
2,563,393	-		AO353_11605	0.27	+0.3
2,563,393	-		AO353_11605	0.27	+0.8
2,563,393	-		AO353_11605	0.27	-0.1
2,563,393	-		AO353_11605	0.27	-1.4
2,563,393	-		AO353_11605	0.27	-1.1
2,563,434	+		AO353_11605	0.33	+0.5
2,563,434	+		AO353_11605	0.33	-0.7
2,563,434	+		AO353_11605	0.33	+0.7
2,563,434	+		AO353_11605	0.33	+0.7
2,563,434	+		AO353_11605	0.33	+0.7
2,563,434	+		AO353_11605	0.33	+0.7
2,563,435	-		AO353_11605	0.33	-0.0
2,563,435	-		AO353_11605	0.33	+1.4
2,563,680	+		AO353_11605	0.70	+1.5
2,563,680	+		AO353_11605	0.70	-1.3
2,563,681	-		AO353_11605	0.70	+0.7
2,563,681	-		AO353_11605	0.70	-1.2
2,563,681	-		AO353_11605	0.70	-0.9
2,563,681	-		AO353_11605	0.70	+0.5
2,563,766	+		AO353_11605	0.83	-0.9
2,563,766	+		AO353_11605	0.83	+1.4
2,563,766	+		AO353_11605	0.83	+0.7
2,563,766	+		AO353_11605	0.83	-0.3
2,563,767	-		AO353_11605	0.83	+0.7
2,563,767	-		AO353_11605	0.83	-0.9
2,563,767	-		AO353_11605	0.83	-0.3
2,563,770	+		AO353_11605	0.84	-1.3
2,563,770	+		AO353_11605	0.84	+2.0
2,563,771	-		AO353_11605	0.84	+0.8
2,563,771	-		AO353_11605	0.84	-0.2
2,563,771	-		AO353_11605	0.84	-0.0
2,563,771	-		AO353_11605	0.84	+2.0
2,563,771	-		AO353_11605	0.84	-0.3
2,563,788	+		AO353_11605	0.86	+2.3
2,563,788	+		AO353_11605	0.86	+1.1
2,563,788	+		AO353_11605	0.86	+1.2
2,563,789	-		AO353_11605	0.87	-0.6
2,563,789	-		AO353_11605	0.87	+0.5
2,563,798	+		AO353_11605	0.88	-0.6
2,563,798	+		AO353_11605	0.88	+1.0
2,563,799	-		AO353_11605	0.88	+0.1
2,563,817	+				+0.6
2,563,817	+				-1.1
2,563,817	+				+0.8
2,563,818	-				+0.7
2,563,818	-				+0.0
2,563,818	-				+1.0
2,563,818	-				-1.1
2,563,948	-				+1.3
2,563,948	-				+0.2
2,563,948	-				-0.7
2,564,138	+		AO353_11610	0.34	-0.5
2,564,138	+		AO353_11610	0.34	+0.5
2,564,138	+		AO353_11610	0.34	+0.0
2,564,139	-		AO353_11610	0.34	+2.3
2,564,197	-		AO353_11610	0.41	+1.2
2,564,197	-		AO353_11610	0.41	+1.3
2,564,197	-		AO353_11610	0.41	-0.3
2,564,554	+		AO353_11610	0.87	+0.3
2,564,554	+		AO353_11610	0.87	+0.4
2,564,555	-		AO353_11610	0.87	-2.2
2,564,603	+				+1.8
2,564,603	+				+1.0
2,564,603	+				+1.0
2,564,603	+				+0.6
2,564,603	+				-0.0
2,564,603	+				+0.1
2,564,603	+				-0.2
2,564,603	+				+0.4
2,564,604	-				+1.2
2,564,604	-				+0.4
2,564,604	-				-0.1
2,564,681	+				+1.4
2,564,681	+				+2.1
2,564,681	+				-0.4
2,564,681	+				+0.7
2,564,682	-				+0.1
2,564,682	-				-0.7
2,564,721	+				+0.7
2,564,721	+				-1.7
2,564,721	+				+0.8
2,564,721	+				-1.3
2,564,721	+				+0.6
2,564,721	+				+0.0
2,564,722	-				-0.4
2,564,722	-				+0.2
2,564,722	-				-0.7
2,564,782	+		AO353_11615	0.15	-0.2
2,564,782	+		AO353_11615	0.15	-0.2
2,564,782	+		AO353_11615	0.15	-0.3
2,564,783	-		AO353_11615	0.15	-1.2
2,564,783	-		AO353_11615	0.15	+2.6
2,564,783	-		AO353_11615	0.15	-0.1
2,564,783	-		AO353_11615	0.15	-1.8
2,564,825	+		AO353_11615	0.19	-0.5
2,564,825	+		AO353_11615	0.19	-0.5
2,564,825	+		AO353_11615	0.19	-0.4
2,564,825	+		AO353_11615	0.19	-3.1
2,564,825	+		AO353_11615	0.19	+0.1
2,564,825	+		AO353_11615	0.19	-0.7
2,564,825	+		AO353_11615	0.19	-0.3
2,564,825	+		AO353_11615	0.19	+0.7
2,564,825	+		AO353_11615	0.19	+1.1
2,564,825	+		AO353_11615	0.19	-0.2
2,564,825	+		AO353_11615	0.19	-0.9
2,564,825	+		AO353_11615	0.19	+0.7
2,564,826	-		AO353_11615	0.20	+0.0
2,564,826	-		AO353_11615	0.20	-0.0
2,564,826	-		AO353_11615	0.20	-0.0
2,564,826	-		AO353_11615	0.20	-1.2
2,564,826	-		AO353_11615	0.20	-0.1
2,564,826	-		AO353_11615	0.20	+1.6
2,564,826	-		AO353_11615	0.20	+1.0
2,564,826	-		AO353_11615	0.20	-1.0
2,564,826	-		AO353_11615	0.20	+1.1
2,564,826	-		AO353_11615	0.20	-0.5
2,564,872	+		AO353_11615	0.25	+0.7
2,564,872	+		AO353_11615	0.25	-0.3
2,564,872	+		AO353_11615	0.25	+0.9
2,564,872	+		AO353_11615	0.25	-0.0
2,564,872	+		AO353_11615	0.25	+0.9
2,564,872	+		AO353_11615	0.25	-2.1
2,564,872	+		AO353_11615	0.25	+0.4
2,564,873	-		AO353_11615	0.25	-0.7
2,564,873	-		AO353_11615	0.25	+1.5
2,564,873	-		AO353_11615	0.25	-1.2