Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11070

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
2,417,574	+		AO353_11060	0.22	-0.6
2,417,574	+		AO353_11060	0.22	+1.7
2,417,574	+		AO353_11060	0.22	-1.1
2,417,574	+		AO353_11060	0.22	-1.5
2,417,574	+		AO353_11060	0.22	-1.1
2,417,575	-		AO353_11060	0.22	-0.5
2,417,575	-		AO353_11060	0.22	+1.9
2,417,575	-		AO353_11060	0.22	+0.8
2,417,575	-		AO353_11060	0.22	-1.1
2,417,575	-		AO353_11060	0.22	+0.7
2,417,625	-		AO353_11060	0.38	-0.2
2,417,747	-		AO353_11060	0.76	+1.9
2,417,747	-		AO353_11060	0.76	+1.2
2,417,826	+				-0.6
2,417,839	+				+0.2
2,417,839	+				-1.2
2,417,839	+				-0.2
2,417,839	+				-0.8
2,417,839	+				-0.5
2,417,839	+				+0.5
2,417,840	-				-1.4
2,417,840	-				+0.1
2,417,846	+				-0.2
2,417,846	+				+1.5
2,417,846	+				-0.3
2,417,846	+				+0.1
2,417,846	+				-1.5
2,417,846	+				+1.1
2,417,847	-				-0.3
2,417,847	-				-1.5
2,417,847	-				+0.0
2,417,847	-				+1.1
2,417,847	-				-0.6
2,417,847	-				-0.3
2,417,847	-				-0.1
2,417,847	-				+1.1
2,417,847	-				+0.0
2,417,850	+				+0.3
2,417,850	+				-0.8
2,417,850	+				-0.1
2,417,851	-				+0.5
2,417,851	-				-0.1
2,417,851	-				-0.8
2,417,851	-				-1.4
2,417,865	+				-0.1
2,417,865	+				+0.5
2,417,865	+				+0.0
2,417,866	-				-0.8
2,417,866	-				+0.3
2,417,893	+				-0.7
2,417,893	+				-1.6
2,417,894	-				-1.8
2,417,894	-				+0.6
2,417,894	-				-0.7
2,417,914	+				-0.2
2,417,914	+				-1.9
2,417,914	+				-0.4
2,417,914	+				+0.3
2,417,914	+				+0.3
2,417,914	+				+1.8
2,417,914	+				+0.7
2,417,914	+				-1.1
2,417,914	+				-0.3
2,417,914	+				+1.2
2,417,915	-				-0.7
2,417,915	-				-0.9
2,417,915	-				-0.5
2,417,915	-				-1.0
2,417,915	-				-1.5
2,417,949	-				+0.9
2,417,951	+				-0.1
2,417,951	+				+0.1
2,417,951	+				-0.9
2,417,951	+				-0.2
2,417,951	+				+0.5
2,417,951	+				-0.4
2,417,952	-				+0.4
2,417,952	-				+2.3
2,417,952	-				+1.5
2,417,952	-				-0.8
2,417,952	-				+0.4
2,417,952	-				-0.2
2,417,976	-				-2.2
2,417,993	+				+0.0
2,417,993	+				+0.0
2,417,993	+				+0.5
2,417,993	+				-1.6
2,417,993	+				-0.0
2,417,993	+				-0.8
2,417,993	+				+0.0
2,417,993	+				+1.3
2,417,994	-				+0.8
2,417,994	-				-1.1
2,417,994	-				+1.3
2,417,994	-				-1.0
2,417,994	-				+0.0
2,417,994	-				-0.3
2,417,994	-				+1.0
2,417,994	-				+0.8
2,417,994	-				+0.2
2,418,052	+		AO353_11065	0.24	-1.8
2,418,052	+		AO353_11065	0.24	-0.5
2,418,052	+		AO353_11065	0.24	+0.3
2,418,052	+		AO353_11065	0.24	-1.3
2,418,052	+		AO353_11065	0.24	-1.1
2,418,052	+		AO353_11065	0.24	-0.5
2,418,052	+		AO353_11065	0.24	+0.0
2,418,053	-		AO353_11065	0.24	-0.5
2,418,053	-		AO353_11065	0.24	+0.0
2,418,053	-		AO353_11065	0.24	-0.5
2,418,053	-		AO353_11065	0.24	-0.3
2,418,053	-		AO353_11065	0.24	+0.9
2,418,053	-		AO353_11065	0.24	+0.8
2,418,056	+		AO353_11065	0.26	-0.6
2,418,056	+		AO353_11065	0.26	+0.2
2,418,056	+		AO353_11065	0.26	+0.6
2,418,056	+		AO353_11065	0.26	-0.7
2,418,056	+		AO353_11065	0.26	+0.7
2,418,056	+		AO353_11065	0.26	+0.2
2,418,056	+		AO353_11065	0.26	-0.1
2,418,056	+		AO353_11065	0.26	+0.1
2,418,056	+		AO353_11065	0.26	+0.3
2,418,056	+		AO353_11065	0.26	-0.5
2,418,056	+		AO353_11065	0.26	+0.6
2,418,056	+		AO353_11065	0.26	+2.3
2,418,056	+		AO353_11065	0.26	-0.5
2,418,056	+		AO353_11065	0.26	+0.0
2,418,056	+		AO353_11065	0.26	-1.1
2,418,056	+		AO353_11065	0.26	-0.2
2,418,056	+		AO353_11065	0.26	-0.8
2,418,056	+		AO353_11065	0.26	+0.1
2,418,056	+		AO353_11065	0.26	-0.0
2,418,056	+		AO353_11065	0.26	+0.5
2,418,056	+		AO353_11065	0.26	-1.4
2,418,056	+		AO353_11065	0.26	+0.5
2,418,056	+		AO353_11065	0.26	-0.4
2,418,057	-		AO353_11065	0.26	+0.6
2,418,057	-		AO353_11065	0.26	+1.5
2,418,057	-		AO353_11065	0.26	+0.1
2,418,057	-		AO353_11065	0.26	-0.4
2,418,057	-		AO353_11065	0.26	-1.6
2,418,057	-		AO353_11065	0.26	+0.4
2,418,057	-		AO353_11065	0.26	-1.1
2,418,057	-		AO353_11065	0.26	-0.8
2,418,057	-		AO353_11065	0.26	+0.5
2,418,057	-		AO353_11065	0.26	+0.6
2,418,057	-		AO353_11065	0.26	+0.0
2,418,057	-		AO353_11065	0.26	-1.6
2,418,057	-		AO353_11065	0.26	-1.1
2,418,057	-		AO353_11065	0.26	-0.1
2,418,057	-		AO353_11065	0.26	-0.3
2,418,057	-		AO353_11065	0.26	+0.3
2,418,057	-		AO353_11065	0.26	-0.4
2,418,057	-		AO353_11065	0.26	+0.8
2,418,079	+		AO353_11065	0.37	+1.1
2,418,079	+		AO353_11065	0.37	-0.8
2,418,079	+		AO353_11065	0.37	+0.3
2,418,079	+		AO353_11065	0.37	-0.8
2,418,080	-		AO353_11065	0.37	+0.0
2,418,080	-		AO353_11065	0.37	+0.5
2,418,080	-		AO353_11065	0.37	+1.2
2,418,080	-		AO353_11065	0.37	-0.1
2,418,151	+		AO353_11065	0.71	+1.6
2,418,151	+		AO353_11065	0.71	-1.0
2,418,152	-		AO353_11065	0.71	+0.4
2,418,161	+		AO353_11065	0.76	+0.4
2,418,178	+		AO353_11065	0.84	+0.2
2,418,200	+				-0.8
2,418,201	-				-1.8
2,418,288	+				+0.1
2,418,299	+				-0.9
2,418,299	+				-0.2
2,418,337	+				+1.0
2,418,337	+				-0.5
2,418,338	-				-0.6
2,418,362	+				-0.5
2,418,479	-				+0.8
2,418,514	-		AO353_11070	0.15	-0.8
2,418,651	-		AO353_11070	0.78	-0.9
2,418,651	-		AO353_11070	0.78	+1.0
2,418,688	+				+0.2
2,418,688	+				-0.2
2,418,688	+				-1.1
2,418,688	+				-1.8
2,418,688	+				-0.5
2,418,688	+				-0.2
2,418,688	+				+1.3
2,418,688	+				+0.2
2,418,688	+				-0.1
2,418,688	+				-2.4
2,418,688	+				-2.4
2,418,688	+				+0.2
2,418,689	-				-0.8
2,418,689	-				-0.5
2,418,689	-				-1.1
2,418,689	-				+0.4
2,418,689	-				-2.7
2,418,689	-				-1.8
2,418,689	-				+1.2
2,418,689	-				-0.1
2,418,689	-				+1.6
2,418,689	-				-0.8
2,418,727	+				+0.5
2,418,731	+				+0.5
2,418,782	+				+1.1
2,418,782	+				-1.4
2,418,783	-				-1.1
2,418,822	+				-2.8
2,418,832	-				-4.0
2,418,871	-				-0.5
2,418,913	+				+0.2
2,418,913	+				-0.7
2,418,913	+				+0.5
2,418,913	+				-0.0
2,418,913	+				-2.2
2,418,913	+				+0.8
2,418,913	+				-0.1
2,418,913	+				+0.8
2,418,913	+				-1.5
2,418,913	+				+0.2
2,418,913	+				-0.8
2,418,914	-				-0.5
2,418,914	-				-1.0
2,418,914	-				-0.8
2,418,914	-				-0.8
2,418,914	-				-0.7
2,418,914	-				-0.2
2,418,914	-				-0.7
2,418,914	-				-0.0
2,418,914	-				-0.7
2,418,914	-				-1.0
2,418,914	-				-0.8
2,418,914	-				+0.5
2,418,914	-				+0.4
2,418,940	+				+0.6
2,419,011	+				+0.1
2,419,011	+				-0.1
2,419,011	+				-1.4
2,419,012	-				-0.4
2,419,012	-				-1.7
2,419,012	-				-1.5
2,419,123	+				+1.2
2,419,123	+				-1.3
2,419,123	+				+0.1
2,419,124	-				+0.9
2,419,124	-				+0.3
2,419,124	-				-0.9
2,419,124	-				+0.8
2,419,124	-				-0.0
2,419,206	+		AO353_11075	0.13	-0.2
2,419,206	+		AO353_11075	0.13	-0.1
2,419,206	+		AO353_11075	0.13	+1.6
2,419,206	+		AO353_11075	0.13	-1.1
2,419,207	-		AO353_11075	0.13	-0.3
2,419,423	+		AO353_11075	0.27	-0.3
2,419,423	+		AO353_11075	0.27	-1.2
2,419,424	-		AO353_11075	0.27	-0.3
2,419,424	-		AO353_11075	0.27	-2.8
2,419,445	+		AO353_11075	0.29	+0.6
2,419,445	+		AO353_11075	0.29	+1.0
2,419,445	+		AO353_11075	0.29	+0.5
2,419,446	-		AO353_11075	0.29	+3.1
2,419,528	+		AO353_11075	0.34	-0.4
2,419,528	+		AO353_11075	0.34	-0.7
2,419,528	+		AO353_11075	0.34	-0.5
2,419,529	-		AO353_11075	0.34	+0.0
2,419,529	-		AO353_11075	0.34	-2.9
2,419,529	-		AO353_11075	0.34	-1.2
2,419,529	-				+1.3
2,419,529	-		AO353_11075	0.34	-0.1
2,419,529	-		AO353_11075	0.34	+0.5
2,419,654	+		AO353_11075	0.43	+0.3
2,419,654	+		AO353_11075	0.43	+0.9
2,419,654	+		AO353_11075	0.43	-0.1
2,419,654	+		AO353_11075	0.43	-1.8
2,419,655	-		AO353_11075	0.43	+0.2
2,419,655	-		AO353_11075	0.43	-0.7
2,419,655	-		AO353_11075	0.43	-0.7
2,419,655	-		AO353_11075	0.43	+1.9
2,419,655	-		AO353_11075	0.43	+0.0
2,419,655	-		AO353_11075	0.43	+0.5
2,419,655	-		AO353_11075	0.43	+1.5
2,419,655	-		AO353_11075	0.43	-1.8
2,419,655	-		AO353_11075	0.43	+0.4
2,419,655	-		AO353_11075	0.43	-0.1