Experiment: nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10370 and AO353_10375 are separated by 1 nucleotides AO353_10375 and AO353_10380 are separated by 213 nucleotides AO353_10380 and AO353_10385 are separated by 162 nucleotides AO353_10385 and AO353_10390 are separated by 45 nucleotides
AO353_10370: AO353_10370 - glucosamine--fructose-6-phosphate aminotransferase, at 2,273,120 to 2,274,952
_10370
AO353_10375: AO353_10375 - XRE family transcriptional regulator, at 2,274,954 to 2,275,730
_10375
AO353_10380: AO353_10380 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase, at 2,275,944 to 2,277,266
_10380
AO353_10385: AO353_10385 - ATP synthase F0F1 subunit epsilon, at 2,277,429 to 2,277,854
_10385
AO353_10390: AO353_10390 - ATP synthase subunit beta, at 2,277,900 to 2,279,279
_10390
Position (kb)
2275
2276
2277
2278 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2274.982 kb on - strand at 2274.982 kb on - strand at 2274.982 kb on - strand at 2274.982 kb on - strand at 2275.044 kb on - strand at 2275.044 kb on - strand, within AO353_10375 at 2275.047 kb on - strand, within AO353_10375 at 2275.047 kb on - strand, within AO353_10375 at 2275.047 kb on - strand, within AO353_10375 at 2275.047 kb on - strand, within AO353_10375 at 2275.188 kb on - strand, within AO353_10375 at 2275.195 kb on - strand, within AO353_10375 at 2275.241 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.361 kb on - strand, within AO353_10375 at 2275.694 kb on + strand at 2275.695 kb on - strand at 2275.695 kb on - strand at 2275.695 kb on - strand at 2275.695 kb on - strand at 2275.695 kb on - strand at 2275.695 kb on - strand at 2275.695 kb on - strand at 2275.698 kb on - strand at 2275.715 kb on + strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.716 kb on - strand at 2275.824 kb on + strand at 2275.825 kb on - strand at 2275.853 kb on - strand at 2275.871 kb on - strand at 2275.896 kb on + strand at 2275.896 kb on + strand at 2275.896 kb on + strand at 2275.897 kb on - strand at 2275.916 kb on + strand at 2275.916 kb on + strand at 2275.916 kb on + strand at 2275.916 kb on + strand at 2275.916 kb on + strand at 2275.916 kb on + strand at 2275.917 kb on - strand at 2275.917 kb on - strand at 2275.917 kb on - strand at 2275.940 kb on + strand at 2277.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 200 mM remove 2,274,982 - -0.1 2,274,982 - +0.0 2,274,982 - +0.4 2,274,982 - +0.8 2,275,044 - +2.3 2,275,044 - AO353_10375 0.12 +0.5 2,275,047 - AO353_10375 0.12 -0.4 2,275,047 - AO353_10375 0.12 -0.3 2,275,047 - AO353_10375 0.12 +0.1 2,275,047 - AO353_10375 0.12 +0.7 2,275,188 - AO353_10375 0.30 +0.3 2,275,195 - AO353_10375 0.31 -0.4 2,275,241 - AO353_10375 0.37 +1.0 2,275,361 - AO353_10375 0.52 +0.4 2,275,361 - AO353_10375 0.52 -0.6 2,275,361 - AO353_10375 0.52 -1.9 2,275,361 - AO353_10375 0.52 -0.2 2,275,361 - AO353_10375 0.52 +0.8 2,275,361 - AO353_10375 0.52 -0.2 2,275,361 - AO353_10375 0.52 -0.0 2,275,361 - AO353_10375 0.52 -0.5 2,275,694 + +0.3 2,275,695 - +1.7 2,275,695 - -0.5 2,275,695 - +0.6 2,275,695 - -2.2 2,275,695 - +1.1 2,275,695 - -1.2 2,275,695 - +0.5 2,275,698 - +0.3 2,275,715 + -0.2 2,275,716 - -0.5 2,275,716 - -1.0 2,275,716 - +0.0 2,275,716 - +1.8 2,275,716 - -0.1 2,275,716 - -0.5 2,275,716 - -0.5 2,275,716 - -0.3 2,275,716 - +1.7 2,275,716 - +0.5 2,275,716 - -0.5 2,275,716 - +0.7 2,275,716 - +1.3 2,275,716 - -0.7 2,275,716 - +0.2 2,275,824 + +0.7 2,275,825 - +0.8 2,275,853 - +1.1 2,275,871 - +0.0 2,275,896 + -1.2 2,275,896 + -1.7 2,275,896 + -0.8 2,275,897 - -0.1 2,275,916 + -0.5 2,275,916 + +0.0 2,275,916 + -0.2 2,275,916 + -0.3 2,275,916 + +0.3 2,275,916 + -0.2 2,275,917 - -0.1 2,275,917 - -0.3 2,275,917 - -1.2 2,275,940 + +0.5 2,277,357 - +1.5
Or see this region's nucleotide sequence