Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09535

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
2,090,363	+		AO353_09530	0.70	-1.1
2,090,363	+		AO353_09530	0.70	+1.3
2,090,363	+		AO353_09530	0.70	+2.0
2,090,363	+		AO353_09530	0.70	+0.7
2,090,363	+		AO353_09530	0.70	-0.0
2,090,364	-		AO353_09530	0.70	+0.0
2,090,364	-		AO353_09530	0.70	-1.1
2,090,364	-		AO353_09530	0.70	+0.1
2,090,640	+		AO353_09530	0.79	+1.0
2,090,640	+		AO353_09530	0.79	+0.6
2,090,640	+		AO353_09530	0.79	-0.7
2,090,640	+		AO353_09530	0.79	+0.4
2,090,640	+		AO353_09530	0.79	-0.6
2,090,640	+		AO353_09530	0.79	-0.7
2,090,640	+		AO353_09530	0.79	-2.1
2,090,641	-		AO353_09530	0.79	-0.0
2,090,641	-		AO353_09530	0.79	-0.2
2,090,641	-		AO353_09530	0.79	+0.3
2,090,641	-		AO353_09530	0.79	-0.3
2,090,667	+		AO353_09530	0.80	+1.5
2,090,668	-		AO353_09530	0.80	+0.8
2,090,688	+		AO353_09530	0.81	+2.3
2,090,688	+		AO353_09530	0.81	-1.3
2,090,688	+		AO353_09530	0.81	-0.7
2,090,689	-		AO353_09530	0.81	+0.4
2,090,689	-		AO353_09530	0.81	+0.2
2,090,742	+		AO353_09530	0.83	-0.0
2,090,742	+		AO353_09530	0.83	-0.6
2,090,742	+		AO353_09530	0.83	+1.4
2,090,742	+		AO353_09530	0.83	-0.6
2,090,742	+		AO353_09530	0.83	-0.3
2,090,742	+		AO353_09530	0.83	-0.8
2,090,743	-		AO353_09530	0.83	-1.3
2,090,743	-		AO353_09530	0.83	+1.6
2,090,743	-		AO353_09530	0.83	-0.5
2,090,743	-		AO353_09530	0.83	-0.1
2,090,743	-		AO353_09530	0.83	+0.7
2,090,743	-		AO353_09530	0.83	+0.9
2,090,743	-		AO353_09530	0.83	+0.9
2,090,743	-		AO353_09530	0.83	-0.2
2,090,743	-		AO353_09530	0.83	-0.1
2,090,901	+		AO353_09530	0.88	+0.1
2,090,901	+		AO353_09530	0.88	+0.1
2,090,902	-		AO353_09530	0.88	-0.1
2,090,902	-		AO353_09530	0.88	-0.5
2,090,931	+		AO353_09530	0.89	+1.4
2,090,931	+		AO353_09530	0.89	+0.1
2,090,931	+		AO353_09530	0.89	+1.3
2,090,932	-		AO353_09530	0.89	+0.3
2,090,932	-		AO353_09530	0.89	+0.1
2,090,932	-		AO353_09530	0.89	+0.3
2,090,932	-		AO353_09530	0.89	+2.1
2,090,932	-		AO353_09530	0.89	+0.3
2,090,932	-		AO353_09530	0.89	-0.5
2,090,932	-		AO353_09530	0.89	-1.1
2,090,969	-				+0.8
2,090,997	+				+0.5
2,090,997	+				-2.0
2,090,997	+				-0.5
2,090,997	+				-0.1
2,090,997	+				+0.1
2,091,012	+				+1.0
2,091,012	+				+1.7
2,091,012	+				+2.0
2,091,012	+				-0.2
2,091,012	+				+0.3
2,091,012	+				+0.9
2,091,012	+				+1.0
2,091,012	+				+1.1
2,091,012	+				+1.7
2,091,012	+				+2.6
2,091,012	+				+1.3
2,091,012	+				+0.9
2,091,012	+				+0.3
2,091,012	+				+1.1
2,091,012	+				+1.2
2,091,012	+				-0.1
2,091,012	+				+1.3
2,091,012	+				-0.2
2,091,012	+				+1.0
2,091,012	+				+0.8
2,091,012	+				+0.3
2,091,012	+				+0.8
2,091,012	+				+1.5
2,091,013	-				-0.9
2,091,013	-				+0.3
2,091,013	-				+0.4
2,091,013	-				+0.2
2,091,013	-				+0.2
2,091,013	-				-0.2
2,091,013	-				-0.9
2,091,013	-				-0.3
2,091,013	-				+0.4
2,091,013	-				+1.0
2,091,013	-				+0.4
2,091,013	-				+0.1
2,091,013	-				-1.0
2,091,013	-				-0.5
2,091,013	-				-0.1
2,091,013	-				+0.2
2,091,013	-				+0.9
2,091,013	-				-1.8
2,091,013	-				+0.8
2,091,013	-				+0.0
2,091,013	-				-0.4
2,091,013	-				+0.6
2,091,013	-				+0.9
2,091,013	-				+1.3
2,091,013	-				+0.2
2,091,013	-				-0.7
2,091,013	-				+1.3
2,091,013	-				+0.5
2,091,013	-				+0.7
2,091,013	-				-0.3
2,091,013	-				+1.3
2,091,013	-				-0.4
2,091,013	-				+1.5
2,091,015	+				+0.6
2,091,015	+				+1.2
2,091,015	+				+0.9
2,091,015	+				+0.9
2,091,015	+				+0.8
2,091,015	+				-0.3
2,091,015	+				+0.2
2,091,015	+				+0.7
2,091,016	-				+0.4
2,091,016	-				-0.4
2,091,016	-				+0.3
2,091,016	-				+0.6
2,091,016	-				+1.6
2,091,016	-				-0.8
2,091,055	+				-0.4
2,091,056	-				+1.9
2,091,189	+				-1.4
2,091,190	-				+0.4
2,091,190	-				+0.3
2,091,190	-				-0.2
2,091,234	+				+1.0
2,091,235	-				-0.5
2,091,235	-				+0.5
2,091,373	+		AO353_09535	0.15	+0.9
2,091,373	+		AO353_09535	0.15	-0.4
2,091,373	+		AO353_09535	0.15	+0.9
2,091,374	-		AO353_09535	0.15	+1.9
2,091,374	-		AO353_09535	0.15	-0.5
2,091,374	-		AO353_09535	0.15	-0.5
2,091,374	-		AO353_09535	0.15	+1.3
2,091,431	+		AO353_09535	0.23	+1.4
2,091,431	+		AO353_09535	0.23	+1.6
2,091,431	+		AO353_09535	0.23	+0.8
2,091,431	+		AO353_09535	0.23	+1.4
2,091,431	+		AO353_09535	0.23	+1.9
2,091,431	+		AO353_09535	0.23	+1.7
2,091,431	+		AO353_09535	0.23	+2.0
2,091,431	+		AO353_09535	0.23	-0.7
2,091,432	-		AO353_09535	0.23	+1.5
2,091,432	-		AO353_09535	0.23	+1.3
2,091,432	-		AO353_09535	0.23	+0.6
2,091,432	-		AO353_09535	0.23	+0.1
2,091,432	-		AO353_09535	0.23	+2.6
2,091,432	-		AO353_09535	0.23	-0.1
2,091,432	-		AO353_09535	0.23	-0.4
2,091,578	+		AO353_09535	0.43	+0.1
2,091,578	+		AO353_09535	0.43	+1.7
2,091,578	+		AO353_09535	0.43	+1.6
2,091,578	+		AO353_09535	0.43	+1.9
2,091,578	+		AO353_09535	0.43	+1.9
2,091,578	+		AO353_09535	0.43	+1.2
2,091,578	+		AO353_09535	0.43	+0.8
2,091,578	+		AO353_09535	0.43	+1.7
2,091,579	-		AO353_09535	0.43	-0.5
2,091,579	-		AO353_09535	0.43	+1.3
2,091,579	-		AO353_09535	0.43	+0.5
2,091,579	-		AO353_09535	0.43	+0.9
2,091,579	-		AO353_09535	0.43	+0.9
2,091,579	-		AO353_09535	0.43	-0.5
2,091,579	-		AO353_09535	0.43	+0.6
2,091,579	-		AO353_09535	0.43	+1.2
2,091,626	+		AO353_09535	0.49	+1.0
2,091,626	+		AO353_09535	0.49	+1.2
2,091,626	+		AO353_09535	0.49	+2.1
2,091,627	-		AO353_09535	0.49	+1.5
2,091,627	-		AO353_09535	0.49	-0.8
2,091,627	-		AO353_09535	0.49	-1.1
2,091,627	-		AO353_09535	0.49	+1.2
2,091,627	-		AO353_09535	0.49	+0.8
2,091,627	-		AO353_09535	0.49	+0.2
2,091,782	+		AO353_09535	0.71	+2.0
2,091,845	+		AO353_09535	0.79	+1.4
2,091,845	+		AO353_09535	0.79	+1.5
2,091,845	+		AO353_09535	0.79	-0.1
2,091,845	+		AO353_09535	0.79	+0.7
2,091,845	+		AO353_09535	0.79	+2.1
2,091,846	-		AO353_09535	0.79	+0.5
2,091,846	-		AO353_09535	0.79	-1.3
2,091,846	-		AO353_09535	0.79	-0.0
2,091,943	-				+1.0
2,091,998	+				+0.6
2,091,998	+				+2.0
2,091,998	+				+2.1
2,091,998	+				+1.7
2,091,998	+				+0.9
2,091,998	+				+1.5
2,091,998	+				+2.1
2,091,998	+				+0.7
2,091,998	+				+1.2
2,091,998	+				+1.4
2,091,998	+				+1.7
2,091,998	+				+0.3
2,091,998	+				+1.1
2,091,998	+				+0.4
2,091,998	+				-0.1
2,091,998	+				+1.8
2,091,998	+				+0.6
2,091,998	+				+1.0
2,091,999	-				+1.5
2,091,999	-				+1.4
2,091,999	-				+0.5
2,091,999	-				+2.5
2,091,999	-				+1.7
2,091,999	-				+0.3
2,091,999	-				+2.3
2,092,069	+		AO353_09540	0.11	+1.5
2,092,070	-		AO353_09540	0.11	-3.3
2,092,242	+		AO353_09540	0.37	+0.3
2,092,242	+		AO353_09540	0.37	+0.8
2,092,453	+		AO353_09540	0.70	+2.3
2,092,453	+		AO353_09540	0.70	+1.6
2,092,453	+		AO353_09540	0.70	+0.2
2,092,453	+		AO353_09540	0.70	+0.8
2,092,453	+		AO353_09540	0.70	+1.3
2,092,453	+		AO353_09540	0.70	+0.2
2,092,453	+		AO353_09540	0.70	+0.7
2,092,453	+		AO353_09540	0.70	+0.6
2,092,453	+		AO353_09540	0.70	+1.6
2,092,453	+		AO353_09540	0.70	-0.4
2,092,453	+		AO353_09540	0.70	+0.8
2,092,454	-		AO353_09540	0.70	-2.0
2,092,454	-		AO353_09540	0.70	-1.4
2,092,454	-		AO353_09540	0.70	-2.1
2,092,454	-		AO353_09540	0.70	+0.3
2,092,454	-		AO353_09540	0.70	-2.8
2,092,454	-		AO353_09540	0.70	-0.3
2,092,454	-		AO353_09540	0.70	-0.2
2,092,454	-		AO353_09540	0.70	+0.9
2,092,454	-		AO353_09540	0.70	-1.8
2,092,454	-		AO353_09540	0.70	+0.3
2,092,454	-		AO353_09540	0.70	-1.8
2,092,454	-		AO353_09540	0.70	+0.5
2,092,454	-		AO353_09540	0.70	-1.7
2,092,454	-		AO353_09540	0.70	-0.9
2,092,471	-		AO353_09540	0.72	-1.3
2,092,471	-		AO353_09540	0.72	-0.7
2,092,496	+		AO353_09540	0.76	+1.6
2,092,497	-		AO353_09540	0.76	-1.8
2,092,497	-		AO353_09540	0.76	-1.6
2,092,497	-		AO353_09540	0.76	-0.7
2,092,631	+				+2.1
2,092,632	-				-2.4
2,092,651	-				-0.1
2,092,726	+				+1.0
2,092,726	+				-0.2
2,092,726	+				-0.5
2,092,727	-				-1.5
2,092,727	-				-2.9
2,092,727	-				-1.5
2,092,727	-				-0.3
2,092,951	+				+1.3
2,092,951	+				+1.9
2,092,951	+				+1.4
2,092,952	-				-1.1
2,092,952	-				-1.1
2,092,980	+				-0.2
2,092,980	+				-0.3
2,092,981	-				-1.4
2,092,981	-				-0.5
2,092,981	-				-0.7