Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08255

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,814,276	-				-2.1
1,814,276	-				-0.3
1,814,276	-				-1.7
1,814,276	-				-1.6
1,814,276	-				-2.6
1,814,280	-				+0.3
1,814,280	-				-2.1
1,814,411	-				-0.9
1,814,417	+				-2.6
1,814,474	-				-3.2
1,814,490	-				-0.4
1,814,490	-				-1.3
1,814,503	-				-1.2
1,814,508	-				-0.7
1,814,508	-				-0.2
1,814,508	-				+0.2
1,814,508	-				-2.2
1,814,508	-				-1.3
1,814,508	-				+0.2
1,814,508	-				-0.9
1,814,531	+				+0.4
1,814,531	+				+0.7
1,814,531	+				-0.0
1,814,538	+				-1.2
1,814,579	-				-1.9
1,814,739	+		AO353_08255	0.13	-1.3
1,814,739	+		AO353_08255	0.13	-0.4
1,814,739	+		AO353_08255	0.13	+1.6
1,814,739	+		AO353_08255	0.13	+1.9
1,814,739	+		AO353_08255	0.13	-0.8
1,814,740	-		AO353_08255	0.13	-1.0
1,814,740	-		AO353_08255	0.13	-2.5
1,814,757	+		AO353_08255	0.14	+0.4
1,814,758	-		AO353_08255	0.14	-4.1
1,814,898	+		AO353_08255	0.24	+0.6
1,814,898	+		AO353_08255	0.24	-3.1
1,814,898	+		AO353_08255	0.24	-0.4
1,814,898	+		AO353_08255	0.24	-1.1
1,814,898	+		AO353_08255	0.24	-1.1
1,814,898	+		AO353_08255	0.24	+0.9
1,814,898	+		AO353_08255	0.24	-2.0
1,814,907	+		AO353_08255	0.25	-0.4
1,814,907	+		AO353_08255	0.25	-0.8
1,814,908	-		AO353_08255	0.25	-2.4
1,814,908	-		AO353_08255	0.25	-2.5
1,814,910	+		AO353_08255	0.25	+0.7
1,814,911	-		AO353_08255	0.25	+0.1
1,814,911	-		AO353_08255	0.25	-1.0
1,814,911	-		AO353_08255	0.25	-1.4
1,814,911	-		AO353_08255	0.25	-1.6
1,814,942	-		AO353_08255	0.27	-2.6
1,814,942	-		AO353_08255	0.27	-0.9
1,814,942	-		AO353_08255	0.27	-2.1
1,815,177	+		AO353_08255	0.45	-1.9
1,815,177	+		AO353_08255	0.45	-1.0
1,815,177	+		AO353_08255	0.45	-1.2
1,815,177	+		AO353_08255	0.45	-0.5
1,815,178	-		AO353_08255	0.45	-2.4
1,815,178	-		AO353_08255	0.45	-1.6
1,815,178	-		AO353_08255	0.45	-1.6
1,815,178	-		AO353_08255	0.45	-0.2
1,815,178	-		AO353_08255	0.45	-3.2
1,815,179	+		AO353_08255	0.45	-0.5
1,815,179	+		AO353_08255	0.45	-2.4
1,815,179	+		AO353_08255	0.45	+1.0
1,815,179	+				+0.8
1,815,180	-		AO353_08255	0.45	-2.4
1,815,180	-		AO353_08255	0.45	-1.8
1,815,180	-		AO353_08255	0.45	-0.7
1,815,180	-		AO353_08255	0.45	-0.9
1,815,180	-		AO353_08255	0.45	-0.4
1,815,180	-		AO353_08255	0.45	-1.4
1,815,189	+		AO353_08255	0.46	+1.1
1,815,189	+		AO353_08255	0.46	-0.3
1,815,189	+		AO353_08255	0.46	-0.9
1,815,189	+		AO353_08255	0.46	-1.2
1,815,190	-		AO353_08255	0.46	-0.7
1,815,190	-		AO353_08255	0.46	-2.3
1,815,190	-		AO353_08255	0.46	-1.6
1,815,190	-		AO353_08255	0.46	-1.7
1,815,190	-		AO353_08255	0.46	-1.3
1,815,229	+		AO353_08255	0.49	-1.8
1,815,229	+		AO353_08255	0.49	-1.2
1,815,230	-		AO353_08255	0.49	-1.1
1,815,230	-		AO353_08255	0.49	-0.2
1,815,230	-		AO353_08255	0.49	-1.6
1,815,264	+		AO353_08255	0.51	-1.2
1,815,265	-		AO353_08255	0.51	-1.5
1,815,355	+		AO353_08255	0.58	+1.6
1,815,355	+		AO353_08255	0.58	-1.9
1,815,355	+		AO353_08255	0.58	+0.0
1,815,355	+		AO353_08255	0.58	-1.7
1,815,355	+		AO353_08255	0.58	+2.1
1,815,356	-		AO353_08255	0.58	-0.3
1,815,356	-		AO353_08255	0.58	-2.1
1,815,356	-		AO353_08255	0.58	-1.2
1,815,356	-		AO353_08255	0.58	-1.3
1,815,356	-		AO353_08255	0.58	-2.3
1,815,356	-		AO353_08255	0.58	-0.7
1,815,356	-		AO353_08255	0.58	-1.2
1,815,356	-		AO353_08255	0.58	-1.6
1,815,471	+		AO353_08255	0.66	-1.9
1,815,537	+		AO353_08255	0.71	-0.6
1,815,537	+		AO353_08255	0.71	-3.3
1,815,537	+		AO353_08255	0.71	-0.2
1,815,538	-		AO353_08255	0.71	-0.7
1,815,546	+		AO353_08255	0.72	+0.1
1,815,546	+		AO353_08255	0.72	-0.1
1,815,546	+		AO353_08255	0.72	-1.9
1,815,547	-		AO353_08255	0.72	-0.9
1,815,569	+		AO353_08255	0.73	-1.3
1,815,569	+		AO353_08255	0.73	-0.1
1,815,569	+		AO353_08255	0.73	-0.3
1,815,569	+		AO353_08255	0.73	-0.7
1,815,570	-		AO353_08255	0.74	-0.7
1,815,570	-		AO353_08255	0.74	-1.3
1,815,691	+		AO353_08255	0.82	+0.2
1,815,691	+		AO353_08255	0.82	-0.6
1,815,720	+		AO353_08255	0.85	+0.0
1,815,720	+		AO353_08255	0.85	-1.2
1,815,721	-		AO353_08255	0.85	-0.6
1,815,861	+				-1.9
1,815,862	-				-0.9
1,815,862	-				-1.4
1,815,862	-				-1.5
1,815,862	-				-0.7
1,815,862	-				-1.8
1,815,895	+				-0.3
1,815,895	+				+1.3
1,815,895	+				-0.8
1,815,895	+				-0.6
1,815,895	+				+0.1
1,815,895	+				-0.8
1,815,895	+				+0.5
1,815,895	+				+0.6
1,815,895	+				-0.9
1,815,895	+				+0.8
1,815,896	-				+1.7
1,815,896	-				-2.0
1,815,896	-				-1.2
1,815,896	-				-0.5
1,815,896	-				-0.7
1,815,896	-				-0.4
1,815,933	+				-1.6
1,815,933	+				-0.6
1,815,934	-				-2.4
1,815,966	-				-0.8
1,815,997	+				+0.6
1,815,998	-				-0.2
1,815,998	-				+1.1
1,815,998	-				-0.3
1,816,089	+		AO353_08260	0.11	+0.4
1,816,089	+		AO353_08260	0.11	+0.3
1,816,089	+		AO353_08260	0.11	-0.5
1,816,090	-		AO353_08260	0.11	-2.8
1,816,090	-		AO353_08260	0.11	+0.6
1,816,090	-		AO353_08260	0.11	-0.2
1,816,090	-		AO353_08260	0.11	-0.2
1,816,090	-		AO353_08260	0.11	-1.3
1,816,090	-		AO353_08260	0.11	-0.3
1,816,090	-		AO353_08260	0.11	-0.5
1,816,230	+		AO353_08260	0.21	-1.2
1,816,230	+		AO353_08260	0.21	-0.9
1,816,230	+		AO353_08260	0.21	-0.0
1,816,231	-		AO353_08260	0.21	-0.9
1,816,231	-		AO353_08260	0.21	-2.0
1,816,231	-		AO353_08260	0.21	-1.0
1,816,231	-		AO353_08260	0.21	-2.2
1,816,275	+		AO353_08260	0.24	-0.3
1,816,348	+		AO353_08260	0.29	-0.8
1,816,348	+		AO353_08260	0.29	-0.7
1,816,349	-		AO353_08260	0.29	-2.7
1,816,349	-		AO353_08260	0.29	-0.0
1,816,555	+		AO353_08260	0.42	-0.9
1,816,555	+		AO353_08260	0.42	-2.5
1,816,555	+		AO353_08260	0.42	-1.3
1,816,556	-		AO353_08260	0.43	+0.1
1,816,556	-		AO353_08260	0.43	-0.7
1,816,614	+		AO353_08260	0.46	+1.1
1,816,651	+		AO353_08260	0.49	-1.4
1,816,652	-		AO353_08260	0.49	-2.2
1,816,652	-		AO353_08260	0.49	+0.0
1,816,873	+		AO353_08260	0.64	+0.8
1,816,873	+		AO353_08260	0.64	-0.4
1,816,873	+		AO353_08260	0.64	-1.0
1,816,873	+		AO353_08260	0.64	+3.1
1,816,873	+		AO353_08260	0.64	-1.3
1,816,873	+		AO353_08260	0.64	-0.2
1,816,874	-		AO353_08260	0.64	+1.6
1,816,874	-		AO353_08260	0.64	-1.0